Array 1 47818-45651 **** Predicted by CRISPRDetect 2.4 *** >NZ_WEGJ01000029.1 Streptomyces sp. RB5 SRB5_29, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 47817 29 100.0 32 ............................. GCCTCCTCGTACTCGCGGGCGGCATCCAGCTC 47756 29 100.0 32 ............................. GCCTTCTGCAGCACGCGGGTCGTGGACATCTT 47695 29 100.0 32 ............................. ACCGCCGCACCCGCATTCCGCCGTGGAGGCGC 47634 29 100.0 32 ............................. CTCCACGTCCTCCGCAGTGCCGGTGAGGTTGA 47573 29 100.0 32 ............................. GTCCATGTAGCGCCCTGGCGTATGAATGAAAT 47512 29 100.0 32 ............................. GGGTGTCCGGCCGCGCAGTGGGTTTTGCGGGC 47451 29 100.0 32 ............................. ATCTCAGTGAGCAGCCCGTTTATCAACACGGA 47390 29 96.6 32 ............................A CGACCTCGGGCGCCAGCTCGGCGGCTGGTCGT 47329 29 100.0 32 ............................. GATTCTTCTGCCATTCCCTCGTAGGCCAAATC 47268 29 100.0 32 ............................. GACGCGCAGGGCAACCCGACCGTCAAGGCCCC 47207 29 100.0 32 ............................. CTTCCAGGGGCGCCGCGTGTACTTCGTCACCC 47146 29 100.0 32 ............................. GAAATGGCGCTGTCTATCGACCCCATCATCAG 47085 29 100.0 32 ............................. CCCGGCAGCGCCCACTACGTGGGCTGCTCGTC 47024 29 100.0 32 ............................. GGGATCCTCGTGATCGACTCTCGCTTCGCTCT 46963 29 100.0 32 ............................. CGGGAGGACTGAGCGATGGCGTGCCGTGAATG 46902 29 100.0 32 ............................. TCGTCCGCCAGCCAGGCGCAGTCAGACTGCGT 46841 29 100.0 33 ............................. CTACCGGAGGCCGGACGGCGTCGGCCGACCGAC 46779 29 100.0 32 ............................. GCTCAGCAGCGCAACGTGAACCGGTTCGGCGA 46718 29 100.0 32 ............................. GAGCACGGCCGCGAGGTCGCCACAGCCCCGCT 46657 29 100.0 32 ............................. ACCCTCTCTCCGGCCGCTCAGGGCGCGGCCCG 46596 29 100.0 32 ............................. GAACTCCCGCGCGTGGACGACCTGCGCCGGGT 46535 29 100.0 32 ............................. ACCAGAACGGGCGGCCCTCACTGGGCACAGTG 46474 29 100.0 32 ............................. CGGCCGAGTTGCTGCGCTGCGCTGCGGGGATC 46413 29 96.6 32 ........................C.... CCTCAGCACACGATGAGCCCGGCCGACGCTGC 46352 29 100.0 32 ............................. CCACGCACCGGCGAGGATGGCTGCCCCAACGG 46291 29 100.0 32 ............................. CTTCCGGGAGATCAGAGCCGCGGTCGCCGAGC 46230 29 100.0 32 ............................. ATCGCCGACTCCATCGGCGACATCGGGGGGCA 46169 29 100.0 32 ............................. CAGGCGCGGCGCCGCAGAAAGGCAGCATCCCA 46108 29 100.0 32 ............................. CCCTGCACCAGCGGCGCGGGAATCCAGTGGGC 46047 29 100.0 32 ............................. GCGGACGCGACCACCTCGTTGGACGGGTAGCC 45986 29 100.0 32 ............................. TTCTCGATCAGCACGATCCCCGCGCGGTTCTT 45925 29 100.0 32 ............................. CTGGAACAGTCGGAGTAGCCCGGTTGCCAGCG G [45910] 45863 29 100.0 32 ............................. CGGGCCATGTCCATCGGCGTCGACGCCTCCGG 45802 29 100.0 32 ............................. TGGCGCCTCCGCCGAATGGCGGGAGAACCCGA 45741 29 93.1 31 ...........................GA TCCGGGCGGCCCCGCCAGCGGTCTCGACGTC 45681 29 79.3 0 ...............A...CCC....AG. | C,T [45657,45663] ========== ====== ====== ====== ============================= ================================= ================== 36 29 99.0 32 CTGCTCTCCGCGCGAGCGGAGGTGTCCCG # Left flank : GCGACGGTCTTGTACGCAGCCGGCACCATCGCTTGAAACGGCGGAGAGATCTTCCCCAGATCATGTAGCCCGGCCCAGAACGACAACACGGCCCGGCAGTCTCCCGCCTCGAGCCCGAGCTCGCCCGCGATGCGCGCCTGAGCGGGCTCGTCGAGCACCACGTCCCACAACTGCCCGAACATCGCAGCGACATCCAGCAGATGGCAGATCACGGGATAGGGCCGCGACAGCCCGTCTTCCTTGCCCCAAAGTCGCGGGTCAATGGCTCCGATGGGCTCATTAGTCATAACATGGGGTTCTATCAACCGCCACTGACAATCGCGTCAACCAGCGGCTTTGTTGCTGCCGGGCGGTAAGCCACGGGCTAGGCTCTGGGTTCAGTGACCCACAGCGCGCGGAGGGATCCAGCGATCGGCAGGACTGAGGGGCAGGCACGGATATCCGTCCTGCAGCAAGGTAAAGACATTGCCAAGCCCTCCTAACGCTGCAGGTCACGAAGC # Right flank : CGCTCCACTGCGCGATTCGGTGACGGGACGCGGTGACGAGGAGGGTGCCCGGTCCTCCGTCGACGGCGGGCAACTCCTCAACGGTGACATCAACCAGGCCCACAGCCTTGAGGAGCTTCGCCCAGACATGAGCCTGCAGCACCCACCGGCTGAGGGTGGCCGCGCTGCCGTCGGGCAGCTTCGCCGGTACGTCCGCCGGGATCACGTCCGTCTCCGCGGGCTTGCCGCTGCGGTAGTGGGCCAGGGTGGAGAACACGAGCCGGCCGCCGGAGCGCAGGGCGCGTGCTGCCACCGGCAGCAGGACGCGGGGGTCGGTGAAGTCGGGGGCGCCGAACACGGCGTACGCCACGTCATAGGTGTCCGGGTGGGCCCTGAGGTGGTCGACGACGTCGGCGTGCACCAGGTGCAGACGGGGCGTCAGCTCGGCGTACAGGCCGGAGGCCATCGCGTGCTGGGCGGGGGAGGCGTCGATGGCGTCGACGTGGGTGGGCTGGTGGTGG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCTCCGCGCGAGCGGAGGTGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGACCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 57458-58951 **** Predicted by CRISPRDetect 2.4 *** >NZ_WEGJ01000029.1 Streptomyces sp. RB5 SRB5_29, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 57458 29 100.0 32 ............................. CCTGTGCCTGCGGCGGACGCGATGGACCGCGC 57519 29 100.0 32 ............................. GAGGTCGGCCGATGACGACGCCGTTCACGTTC 57580 29 100.0 32 ............................. ACCCGGGCGTCGAACTCCTCCTGCGTCCGGTA 57641 29 100.0 32 ............................. GAACTGTCATGACCAGCCTGCCCGATACGGAA 57702 29 100.0 32 ............................. GATGCGGCCGGTCGTGCCATCAGTTCGGCCGT 57763 29 100.0 32 ............................. CTGCGCCAGATCGGATTCCCCGTGGAGTGGAT 57824 29 100.0 32 ............................. GTGACCGAGCTGGTGTCGCGCTTGGCCGAGAG 57885 29 100.0 32 ............................. CTCGCCGCGGTACTGCAGAAGCCCCCGTACAA 57946 29 96.6 32 ............................T CGATGCGGTCGGCGTGCCACTGGCGGCCGACG 58007 29 100.0 32 ............................. CCCGTGCTCACCGCTGGTGTCTGATGGCTGCG 58068 29 100.0 32 ............................. TCGGCATGCACCATGACGGAGCCCTCCGGTGC 58129 29 100.0 32 ............................. CCGTAGGCCAGGGCCTCGGCCCGGGTCCACGC 58190 29 96.6 33 ............................A GTGGGTGGACCGCAAGTTCACGCAGCGGGACAT 58252 29 100.0 32 ............................. ACGGAGACGGAGCGGCTCCAGGATCTGGAGAA 58313 29 96.6 32 ..........T.................. TCCGTGCAGATCCTGGATCCGGTCACGCCGGG 58374 29 100.0 32 ............................. GCGGCCAGGCGGCGGCTCACCACGACGGGGTC 58435 29 100.0 32 ............................. CCGCGGGACTCGACCGTGGACCGCTTCACGAA 58496 29 100.0 32 ............................. GTTCTGGCCCTGTCTGGGCCGGACGGGCGCCG 58557 29 100.0 32 ............................. CTTCGTCTCGATGCGGTCCTGCACGACGCCGA 58618 29 96.6 32 ..........T.................. GCCGACGGCTTCGTGCCGATCAGCATCGAGGC 58679 29 100.0 32 ............................. GCTTCGCGACGGGCGTCCAGGTCCTCCTCGAA 58740 29 100.0 32 ............................. CCGGCGTTCCAGGAGTTGCGGGCCGCTGTGCA 58801 29 100.0 32 ............................. CTCACCCGGGGGCGGGTATGCCCGGCGTGTCC 58862 29 100.0 32 ............................. AATGCCGGCAGGAGTTGCACGACGGCGCCCAT 58923 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 25 29 99.5 32 CTGCTCTCCGCGCGAGCGGAGGTGTCCCG # Left flank : CCCGCATCGTCAGGGACGTCCAGACCCTGCTCGCCCCCGAGGAGGCCCCGGACCAGGACGACGACTCGGAGGAACAACTCGTGGACCTCTGGGACCCCGTGCTCGGCCCCATTCCCGGCGGGACGAACCATGCCCCCTCGTGATGCGAAAGGCCCGAGCCGCCCATGCCCGCGATGACAGTCATCTCCGCCACCGCAGTCCCGGACCACCTCCGCGGCGCGCTCTCCCGCTGGCTTCTGGAAGTCACCCCCACGCTCTACGTCGGGACGATCTCGGCCCGCGTCCGCACGGAGCTCTGGAACGCGCTCACCGCCGCAATCAAGGAAGGCAGCGCAGTCCTCGCCTACCCAGCAGCAAACGAACAGGGCTTCACCCTCCATACCGCCGGCCCGCAACGCCGGGTGCCCATGGACTTCGATGGCCTGACCCTGGTTGCGTTCCAGCGACTGGCGGTTGGTCAAGAGGAGGTAAAGTCCTCCTAGAACCGCAGGTGGCGAAGC # Right flank : GTGCGCCTGCAGCGCCAGCGCGGCCCGGTCCAGGTGCGCCCTTCACCGCCATGCCGCCCGAACACCACTGCTCTCTCACGTAAGGGAATTCCTCCCTCCGGGACACGAGTAGCGACCCCTTCCTCTCACTCTCCGCCACCCGCCTGTATCGACCAATAACGCAACACACCAAGGCATCACGATCCAACGGCCGCTCTTTGATCTTGAATTTCCATTACGCTGAGCTACATGCTGTCACTCAGCGCCGGTAGTGACCCCACCTACCTGACCAAGGCCGTAGGCCAGGGCGCCGAGCACTACTACCTCCGCTCAATCGACCAGGCAGGCGAACCCCCAGGCATCTGGATCGGCCGCGGCTGCGCTGAGCTCGGCCTCGAGCCCGGCGCGGAGATCGACGCTGACGTCTTCACCGACCTCTTCACGGACTTCACCGACCCCCGCCGCCGCGACGCGATGACCGCGGCCTTAGCCGCCATCCCCCACGACCCCCACTCCCCCGC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCTCCGCGCGAGCGGAGGTGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGACCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //