Array 1 93251-87094 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPNC01000009.1 Aeromonas caviae strain KAM335 sequence009, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================================= ================== 93250 29 100.0 32 ............................. CAGAAACGCCCGGTGATGCTTGGCACCTTGAC 93189 29 100.0 32 ............................. GACCCAGACCATGACCAAACCACATACCCGAG 93128 29 100.0 32 ............................. GTCACGCCGTCCACCAAGGATGATGAGATTGT 93067 29 100.0 33 ............................. TCGAGCAGGGGGCCTGGGGCCGTGGCTGGGATC 93005 29 100.0 32 ............................. CCTGGGTGCCATCAAGGCGATGCCGGTGGAAT 92944 29 100.0 33 ............................. TGTCGTACAGTTGTCATACATTTAACCCGTGGT 92882 29 100.0 32 ............................. GGGTCATCGCGGCGACACACCTCAACCCAGCC 92821 29 100.0 55 ............................. AGTCCACCTTGGGCGCCGAGATGAAGCAGGAGTTCCCCAGCACGCCACTGGAGGC 92737 29 100.0 33 ............................. CCTGGCACTCTTGGCGACCAAATCTGTGATGGT 92675 29 100.0 32 ............................. TATCGCTAGGCCCAGCAGTGCTGGGCCTTATT 92614 29 100.0 32 ............................. ACAGTCAGCATCCATGAATGCGGCCTACCGCC 92553 29 100.0 33 ............................. TACCACGTAGACGCCGCCCCATCCGCCGAACAG 92491 29 100.0 32 ............................. TTACAGGTCGTATTTTGCAGGTTACCGATGCC 92430 29 100.0 32 ............................. CTCTTGCCGGTGATGCGCTCGCGAGGGTGGTT 92369 29 100.0 32 ............................. CGCACCATCACCGGGGTAATAGAGTGGGCTGT 92308 29 100.0 32 ............................. CCCATCAGGTCCATCAGGATGGCGTTGTTGAC 92247 29 100.0 32 ............................. ACGGCTCTTTCCAACCTGATGCACGATGCCAC 92186 29 100.0 32 ............................. CAATGGGAATCCCTGCGTGGTGCGATTGAGCA 92125 29 100.0 32 ............................. CCCCTGTGGGTCCGCATGATTCTTGTCATGGC 92064 29 100.0 32 ............................. TCTGCTGCCGCCATGACCCAGGCGCTGGGGGA 92003 29 100.0 32 ............................. CACGTCCTTTCCGCCGCCCTGTACCAGCAGGA 91942 29 100.0 32 ............................. CCCGTAGGCATATCGGGTTGACGGAGATTAAG 91881 29 100.0 32 ............................. GAAGCGCACCAGCTTGCCCTGCTCGTTCTCGA 91820 29 100.0 32 ............................. GCGGGGATGCGACGCCCATCAGCGAAATGTTG 91759 29 100.0 32 ............................. CTCGCTTGGCTGCATTGCCTGCCGGAATGCCG 91698 29 100.0 32 ............................. TCTGCTGCCACGGCTGGGTGAAACATTCCAGC 91637 29 100.0 32 ............................. GGTGACGAGTGCCCCAAATGCCACGGCACCGG 91576 29 100.0 32 ............................. GCAGAACTGCTGCTCAGTCGTGTGCAGCGCTT 91515 29 100.0 32 ............................. CCGAGCAGGCAGAGCTGGAGCAGCTGCGCCAG 91454 29 100.0 32 ............................. GCATCCAGATCGAGCCGCAGCCCCGCTCGGTA 91393 29 100.0 32 ............................. GCCGCGCTGGGTACCGGCGCCAGTGAAACCGG 91332 29 100.0 32 ............................. TATTCCGCTTGGGCCTTGCTCATCACCACACC 91271 29 100.0 32 ............................. CCCTTCATCTACGCCACTAGCCTGTTCCGAAA 91210 29 100.0 32 ............................. GCCGTGTACCGAGGCAGCGGCCCTGCCAAGTC 91149 29 100.0 32 ............................. CCGCCGAGCTGGCCCGCCAGCAGGCCGAAGCC 91088 29 100.0 32 ............................. GTGGCGCAGAAGACGCTTGCCGGCGTGTTGGC 91027 29 100.0 32 ............................. CGGGAACGGCGTGGCGCCAACGTGGCCACCCA 90966 29 100.0 32 ............................. CCCCGCTCGGTAGATGGGCAGTTGCTGGATGA 90905 29 100.0 32 ............................. ATACCGCGCTCCAGCTGATCAACAGCACCTCC 90844 29 100.0 32 ............................. GCTCATGAGGCCGGACGAGATCACCCGGCCAT 90783 29 100.0 32 ............................. TCTGGCTGTCTATGGCCCGAGAGGTATACGGC 90722 29 100.0 32 ............................. TAACCTAACGTCCGCAGGTTACCCGCCAGTTA 90661 29 100.0 32 ............................. CTATACGGTCAACTATATTGCGGGCAATTTCC 90600 29 100.0 32 ............................. CCGAAGAGGAACGCACCATTCTCATACGTTGG 90539 29 100.0 32 ............................. GGTAAGTACGGCGCCACCATCTATCTGGATAA 90478 29 100.0 32 ............................. TTGTTAAATTCGCCCCCGTCCAGCTTTTCGGA 90417 29 100.0 32 ............................. CCTATGTCCAGTTGTTCGACCTGTTAACAGTT 90356 29 100.0 32 ............................. CCTTCAAATGGGACGAGAAAAACGCCGCCGCC 90295 29 100.0 32 ............................. AGTACAACCGCGAGCAGATGCTCCTGGCTGGC 90234 29 100.0 32 ............................. GTGGGCGCCCGCATGGCCTTCATTGCGGCCTA 90173 29 100.0 32 ............................. GAAGTTTCCAGGAACCTGCGGGCGCAGTGTTA 90112 29 100.0 32 ............................. AGGCCGAGCGCCTTGAGCTTGACGGCCTGGAT 90051 29 100.0 32 ............................. CTGAATGGCAAGTTCCGCGCTGACTGGGAGGA 89990 29 100.0 32 ............................. TCTCATTACCGCCCTAGGGGGCTCAAAGGAAA 89929 29 100.0 32 ............................. TTGGCCGATGCGAATGGGGTGAGCCGTGGCAG 89868 29 100.0 32 ............................. GCAGAGTGGCCTGACGCTGATTACGATTCCAT 89807 29 100.0 32 ............................. TCTCGATCCACTCTGGGTCTTTCTCGGAGTGA 89746 29 100.0 32 ............................. CAGCATCACCCGAGCGCATGATAGCTTGCGCC 89685 29 100.0 32 ............................. ACAGCAGAGACACCGGCGTCCATCAAGGTCAG 89624 29 100.0 32 ............................. CTGGCCAGTGTGTACGGCCGGATTTGGGTCGT 89563 29 100.0 32 ............................. AAAGCCACTCGAACCAACACCAACGCCTGGCG 89502 29 100.0 32 ............................. TGGCTAATATGTGTTATCCGTTCCTGTTGTTG 89441 29 100.0 32 ............................. GAGAAGGCGATGCCTATCCCAGTCAGTCAAAT 89380 29 100.0 32 ............................. ACAACGTAATGCGACTGTGGCACGGCACCCGA 89319 29 100.0 32 ............................. GCATGATCAGGTGATCGGCCTCGTCGTTCTCT 89258 29 100.0 32 ............................. TATGGCGGCTCGTATGTGGCAGCAACTCCGGC 89197 29 100.0 32 ............................. GATCCGACCGTGGGCGACAATGCCGCCGAGAT 89136 29 100.0 32 ............................. CCTAACAGCTAACAGCCCAAGGGCTCTATCAT 89075 29 100.0 32 ............................. CAGATGATGCTCTATGCGCTTGGCCTGCTGCG 89014 29 100.0 32 ............................. CAGATGATGCTCTATGCGCTTGGCCTGCTGCG 88953 29 96.6 32 ............................C GACGATCTGAAATCGTCCATTGTCGGATGGCA 88892 29 100.0 32 ............................. GAGAGACGACCATGGCTCGTACTATTACCAGC 88831 29 100.0 32 ............................. GCCGTCCAGGCGAAAGAGACCATCACCCGTTC 88770 29 100.0 32 ............................. ACCGAGGCCGCGCCGCTCTGGATTGGTGATGA 88709 29 100.0 32 ............................. CTGACTACATGGCCAAGCGCGAAGAGGCGATG 88648 29 100.0 32 ............................. CTACTAGCCGTCCCAGTCTGCACAATCCCGCC 88587 29 100.0 32 ............................. CTGGTTATTGCCGGCGCCTGGGCGTCAGGATC 88526 29 100.0 32 ............................. CCAGATTTCTTGATACGCTTCACCATAGATAA 88465 29 100.0 32 ............................. CGCAGCGTCCGGGAGGCCCCGCCGTACTGGAT 88404 29 100.0 32 ............................. CAGGAGGCACTGGATCAGCAAGTCCAAGATGA 88343 29 100.0 32 ............................. ATCTCACCGCTACCTCATCTATAGGCACCGTT 88282 29 100.0 32 ............................. GATAGTTGAGCCGTTGGCGCTATCACGGAAAA 88221 29 100.0 32 ............................. GCGGCGGCGGCCTTGCTGTCTGCTGCCTGGTA 88160 29 100.0 32 ............................. CACCTGGTTGCGCTCGCTGGCACTCCGATAGT 88099 29 100.0 32 ............................. TTGAGGCCGTTCTGCTCGCTGTCGAAATCTGA 88038 29 100.0 32 ............................. TCGAGAGAATCAAACTCGTGTTTTTGATCAGC 87977 29 100.0 33 ............................. GCCACAAATATAGAGGTGCCGGACTGGACTTGC 87915 29 100.0 32 ............................. TCGATGTAAGGGCATTCAGCGCGGATTGTCAC 87854 29 100.0 32 ............................. TATCTCCCACCCGGCCCGGCAACTGACCGAGA 87793 29 100.0 32 ............................. AGCTGGGTTCGCCTTCCAGCGAAGAAGTGAAG 87732 29 100.0 32 ............................. CTGTCACAGTTGCACCGGGACGAGTTTCTGAC 87671 29 100.0 32 ............................. CTGCCGATGGCGGCCTTGGCCGGACCGTCCGG 87610 29 100.0 32 ............................. AAGGCCCAGGCGATCATCTGCTCACTGGCGAG 87549 29 100.0 32 ............................. ATGCTGGACTCGCTGATCCCGTCACCGGTGAG 87488 29 100.0 32 ............................. CAGATCGCCATCTATAACGTTGGCGCTGACGG 87427 29 100.0 32 ............................. GGCATCGCCCAAGCCGGTCATCTGCTGGTCGA 87366 29 96.6 32 ..............T.............. CGCGTCGAATGCTGGGGGTATAACGATGGAAA 87305 29 100.0 32 ............................. CCTGCTGTCGTGGCGGGTGAAGTCGCCGCCGC 87244 29 89.7 32 ........T....T.............T. TGGAACCAGACGTTCAGGTCCAGCATCAAGGT 87183 29 96.6 32 ............T................ GATGGAGTGGTGGCGAAGACGCGAATCCAGAA 87122 29 96.6 0 ............T................ | ========== ====== ====== ====== ============================= ======================================================= ================== 101 29 99.8 32 CTGTTCCCCGCGCCCGCGGGGATGAACCG # Left flank : CCGCTTATCGAGGAGGTGCTCTCGGCCGGGGGCATCACCCCGCCAGACGCCCCTGCAGATGCCCAGCCGCCCGCCATCCCCGAACCCGCCGGCATGGGGGATGCCGGTCACAGGAGTCAGTGATGAGCATGCTGGTGGTGATCACCGAGGATGTGCCGCCGCGCCTGCGCGGCCGGCTCGCGGTCTGGTTACTCGAGGTGCGTGCCGGTGTCTATGTGGGAGATGTGTCGCGCCGGGTGCGAGAGATGATCTGGCAGCAGTGCGAGGCTTTGGTGGAGCAGGGCAATATCGTGATGGCCTGGCCCGCTAATAACGATTCTGGTTTTGACTTTCAAACCCTGGGGACCAATCGCAGGGTGCCGGTGGACCTCGATGGTTGCCGATTGGTCTCTTTTCTACCCATTGAAAATCAATAGCTTAGCGTTCATTAACAATCTGGACTAGTCGGTGGGTTTTCTATGGTTGGAAAAAGCCATCAAAATCAATAGCATCTGTTAAGT # Right flank : AATCTCTTCGGCATGGCATGCTCTCGATTACGTGCTAGTGTAATCGTTCTGGCTGTCATTGTTTGATCAGCAGCGAGAGCTGATAGCGGACATTTTCTAACAGAGCAGCTTTAATTTGGCGCGTCGGGTTTCGATTTTGGGTGTCATCTGATCGCGTGTGTAATCACCCGTAACGAGACAAGTGAATTTTTTGACGAGCATTGAGCGGCGGATTTACACGCCTGCGGCTTTCCCACTCAAATCACCATGATCATTACCAACCCTAGACAGGACGTGGCTTTGCTAGTCGCCAGCCTTCTAGGGATAGGTGATCAGGTAAGGCTTTTCTAATCAGATAAGGTGATCGGATCAGGCAACGCTGATCTGATCCGATGCACCTGATCACCTCTCAAATTTTCTCCAGATACCAGCCCCATGGTTCGTTTTGAGCACCTACTTGGCATGAGACGAACTGCCAGCCAAGGTGGTACAAGTCATTATTTAAACGCCGAAACACCATT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCGCCCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGTTCCCCGCGCCCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //