Array 1 3955-142 **** Predicted by CRISPRDetect 2.4 *** >NZ_PKKM01000007.1 Schaalia odontolytica strain UMB0018 ERR1203605.17957_1_17.7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 3954 36 100.0 28 .................................... ATGGCTGAGCGCATGCCATCGAAGGTGG 3890 36 100.0 28 .................................... TGGCGACACGTATAAGCCGGTCTGTGAA 3826 36 100.0 28 .................................... CAAGGTTTTGCGCATCGACAGCGCCCAT 3762 36 100.0 28 .................................... ACAGCTTGCCCCGCTTGAACCGGACAAC 3698 36 100.0 28 .................................... TTTTCGGCGCGAAGCCGCTCGGGGCGAT 3634 36 100.0 28 .................................... GCCCGGCATGGTCCCGACGGTGGTTTTC 3570 36 100.0 28 .................................... GAGAAGATCGCAGCTCGCAGCCTCTCGA 3506 36 100.0 28 .................................... TCGCACGGCGAGCTGCTGGTAAGTATCA 3442 36 100.0 28 .................................... AGGCCGGCGAAGACCTCCTCCTCGACCT 3378 36 100.0 28 .................................... GTGAATGAAGCGTGTCAGCTCACGACGC 3314 36 100.0 28 .................................... AGGCTGGCCGCGTCCTGCTCGTCAACGG 3250 36 100.0 28 .................................... AGCTCGTAGGTGATGAGCTTGCCGTTGT 3186 36 100.0 28 .................................... ACCTCGGGCGCTCGGGCGCGGGCAGCAG 3122 36 100.0 28 .................................... TCATTCTGATCTCGGGCATGGTTGCCGA 3058 36 100.0 28 .................................... GAGCGCGGGCACGGCCGGCGCGGCCGTG 2994 36 100.0 28 .................................... GACGGCGCGTGGGGATGGGAAGCCAGTA 2930 36 100.0 28 .................................... CCGGAACCGCTGTGCAGCTGGGCTCTAC 2866 36 100.0 28 .................................... GTTGTGGTTGGTAATGGTCACGTGGGCG 2802 36 100.0 28 .................................... TATCGCCGTCGCTTGGTCGCGAGGTCGG 2738 36 100.0 28 .................................... CCGGCTCCAAGCAGCCGCCGACCGTCGA 2674 36 100.0 29 .................................... ACGAGCTGTAGACTGCCCATATAGGTAGG 2609 36 100.0 28 .................................... ATCTCGACGCCGACCGACATGTATCCGG 2545 36 100.0 28 .................................... CCACCGCCCGGTGTGCGCGCCGAAGAAC 2481 36 100.0 28 .................................... ACCCCTGGCAGGCGTGGGTGATCGACAA 2417 36 100.0 28 .................................... TGTAATACGCGAACTTGTAAACGCGACG 2353 36 100.0 28 .................................... ATGTGATCGTATTGCTCGATCGCGGCTT 2289 36 100.0 28 .................................... TCTCCGCTTCGATGGTGTGGTCCCCATC 2225 36 100.0 28 .................................... ATGGCGGCGTCGACGTAGTCGTTGATGT 2161 36 100.0 28 .................................... GTCGCCGAGTAATGGCGCAGAGCGTGCC 2097 36 100.0 28 .................................... GTCAATCGGGAAAGACCGCGCTCATGCG 2033 36 100.0 28 .................................... TTGTCTTTCCCTGGCCGTTCGCGCCCAC 1969 36 97.2 28 ...................................T CGGGCGTCTACTTCAATCAACCCTTGGT 1905 36 100.0 28 .................................... TCCCACAGTTCGAGTTCTCGTTTCCAGC 1841 36 100.0 28 .................................... GCATCATGGACGCGCGGCGTCAACAAGC 1777 36 100.0 28 .................................... CGCCTGGCTCGCGAAGAGATCGACAAGA 1713 36 100.0 28 .................................... CGGTCCGTGATGTCCGTGTCGAGCGGCG 1649 36 100.0 28 .................................... CTGCAGCTGCTCTCCGGCGGGCGAAACT 1585 36 100.0 28 .................................... GTGGCACACAGCAACATCTTCGAGAACG 1521 36 100.0 28 .................................... GCACGTCCTGACGCTCCTCAATGGTGTC 1457 36 100.0 28 .................................... GCGCCGCCGTGGCGCTCCTGAGCGCGCG 1393 36 100.0 28 .................................... GGCGGCGGCGATGACGTCGAGGTCCTGG 1329 36 100.0 28 .................................... CGAGGGTGACGGTCTTGGTGGTAGCCGA 1265 36 100.0 28 .................................... CGAGCATCGAAAGTCACGTGACCGCTGA 1201 36 100.0 28 .................................... TGGCGGGGTCGCCGGACCAGTCCAAGGC 1137 36 100.0 28 .................................... CTCAAAAACGGCGCATATACCGGGAATT 1073 36 100.0 28 .................................... CCAACCGCAAGCTGTACCGTTTCGCGGG 1009 36 100.0 28 .................................... CGCTCGCCCCTCGGCCTGACAGTCGATC 945 36 100.0 28 .................................... CGCTCGCCCCTCGGCCTGACAGTCGATC 881 36 100.0 28 .................................... AACGGCTCGTACACGTTCCGCGTCTGAT 817 36 100.0 28 .................................... TCACTATCGTCCGCCTGAAGACCTACCT 753 36 100.0 28 .................................... TCTGGCTCTGGCACCTGGCCAGGCCTGA 689 36 100.0 28 .................................... CGCAAACTACGACACTGCAGCCGCCGCC 625 36 100.0 28 .................................... CCCTGCACCAGTGGCAGATCACGACCGG 561 36 100.0 28 .................................... GCCCGGGCACAAGGGTCGAGATAGAGAC 497 36 100.0 28 .................................... ACTTCGGTTCGCCGGTCATGAGCGGGTG 433 36 100.0 28 .................................... GTCCGCGCCCGATCGCGCGGCGTGCCCA 369 36 100.0 28 .................................... AGCCTCATAAACGGACCCGTCCCCTGCT 305 36 100.0 28 .................................... ACTTCGGTTCGCCGGTCATGAGCGGGTG 241 36 100.0 28 .................................... AGGTGTTGTTGTGGGCCATCCAGGTGAA 177 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================= ================== 60 36 100.0 28 CAGTATATCAAAGGGGATCGGTGATCAATTCTCAGC # Left flank : GATGGGCACGGTATCCCGGCCGTAGCCGAAGCCCTGGCTCAGTCTTTCGGTCGTTACGTGGAGGGAGACATCGATCGCCTCAATGTGTTCTCGTGGCAGGGACCGTCGTCTGTGGGTACGGAGAACTGACATGGCGGATGACGCTATGTGGTGCTTGGTGATGTTCGATCTCCCCGTGGAGACGAAGAAACAGCGTCGCGAGGCAACGCGTTTCCGCAATGACCTTCTGGATTGGGGCTTCTGCATGGTGCAGTTCAGCGTGTACGTGAAGTACTGGCCGACCGGTGGGCAGGATCATGCGACGCTGCGGGCGATCAAGACTCATCTGCCGGAGGGTGGGCAGGTTCGGGTATTGGCACTGACGGATCGGCAGTGGGCGACGGGGCTTCGTTTTGAGAACGCGAAGCCTCGGAAGGAGCGCGGCTCGCCTGAACAGCTCATGATTTTCTAACGAAGATCCCCTGGTTTTCCGCTATTTTTCAGGGAAAACTAGGGGATCT # Right flank : CAACACGTCGAAACCTACCAGACCCCCACCAGTATATCAAAGGGGCTCTTCATAATTGAGGGTGTAGTTGGGGTCTGAATCCTCCGGTTTCGAGGAGTGCTCGGGTGATGTAGTGGTTGAGGTTTCGGAATCCGAGTGCGGA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAGTATATCAAAGGGGATCGGTGATCAATTCTCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.30,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //