Array 1 6981-7365 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIKY01000325.1 Dolichospermum sp. UHCC 0352 scaffold330_cov0, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================================= ============================================================================================================================================================================ ================== 6981 38 79.5 172 .........CT.TA......C..C.-......G...... TGCAGCAAGAATTAAATATTACATCTATAAATATTACTCAATTCGTCAAAACCTGAATACTCATATCCTCAACAACTTTAAGACGTTGAGCATTTCGTGATGAAGTGTAACTAATTTAGCCAGAAAATTGAAAATAGCCAAAAATAAATTTATATCTTTATGCCATTTACAG T,C [7011,7018] 7193 39 97.4 28 ...........................C........... ACAACATTGAAGTATTTCTTATTTCCAA 7260 39 100.0 28 ....................................... GCAACATTCGAGTACATTTTATCTAGAT 7327 39 97.4 0 ...........C........................... | ========== ====== ====== ====== ======================================= ============================================================================================================================================================================ ================== 4 39 93.6 76 TTTTGTAAATCTCCCTTGTGACAGTATTTAAATAGTCAT # Left flank : CCATACTTCTTGACTCGCAATCTTTGGTCTAACTACAAACCAAGTATTTTCACCATCTAAAATTATTTCATGGGTGTATTGAATGAATGTCCCTAAAGAGGAAGAGTGATAAAAATAAGCGGGTTTTGGGAATTGGTGACAATAATCTGCAAAAGCTTGTAAAATCTCATTTCTTAAAAAGTAACGTTTATGATCCTTGCCTAATTCTAAGATAAAGTCACCTAAAACATTTTTTTCATCACTGTTAACAATAGTTTGCACTAATTTATACATTGTACATTACCAAACTCTAGCTAAAGTTAGGATTATTGAGATACTATTTCAGGTTAATAGTAAATAAGTTACTCAATTATTTACTTCTAGCTAAAGGATGAACCCTTACCTCCTCTTATAGATAGAGAAGTATCTATTAGTTAGATGACAGGGAATAGATAAAATTTTAGCAATCACTAATTTCAACTCAATAACTACCAATTTGGCTTTGTTGCTATTAATTACCA # Right flank : TTTAATACGCAATTTAGAACTGACATTTTCTGTACTATTTAGAGTAACAAATTGCCAATTTGGCGTACCAGACAGGGAAAACATAGTATTCTGCATATAATAGTGTCACAAGGAGTATTTACAAAACTGAAGCCAGGAAAAATTTCAATGTTGTATGACTATTTAAATAGTGTCATAATCCAAATATCTGTATTTCCTATTTTTTACCAAACAATCAAGTTGGACAGGAAATGCTAGGAATTTGCCTATATTTTTTACTAACACAAGGGTAATGTGGTTAGTAATTTTCCAGTCTTTACAATCAAAAATTTCAGAACTTAATCTATTTAGATCATCAATTGCCAATGATACACCCCTAATTAAATGGATAACACTGCTCACTAAACCTCACAGAAAATTCATAAAGTTCTCTGATAACCACAAATAATGTTGATATTTAATCGGTAAGTTATCGCTATACTCGGACTTAGATATCGAAGTTATTTACCAAGAGAATTAAA # Questionable array : NO Score: 2.58 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTTGTAAATCTCCCTTGTGACAGTATTTAAATAGTCAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.20,-3.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [2-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 1 67-471 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIKY01000162.1 Dolichospermum sp. UHCC 0352 scaffold163_cov0, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================== ================== 67 36 100.0 43 .................................... TTTCCGGGAGATCCGTTGAAATCTTCCCTTGGGGGGAGATTTC 146 36 100.0 38 .................................... CATGAATCAGGGGTTCTATGCTACTTTTAAGCCGCCAT 220 36 100.0 36 .................................... ACAGTTCATGTGCAGGGCACACTGCCGACAGTAGAG 292 36 100.0 33 .................................... AAGGTGATGTCTATGGTGCCTGATAGGAATTCG 361 36 100.0 39 .................................... GCGTTTCTTTTGGTTTCTTTCAAAAAAGAAAAAAACCAA 436 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =========================================== ================== 6 36 100.0 40 CCCTACCGATTGGGTTAAATCGGAATTATTGGAAAC # Left flank : TTTTGCCGTTTTTGCCAAAAATTATCAAGGCTCTTATTTTGGCAATAGTATTGTTTCCTCTTTTTTC # Right flank : CCAAAAGATAGTACCTGAAACTGTGTTGATTATTGAAATAACGTAGTTTCAGGTATTTTCAATTATTGATAAAAATCAAATAATGAAAACAAGCGATAGCGAAGCGCTCCGTAGGAATCGCCCTCCGTCCAAGAAGTTGCGATAGTGAAGCGCTCCGCAGGAATCGCCCAAACCATTTATCAAGGCTAATATCATCATGACACAAATAGAGAAAACCAACGATAGCTTGCGTGGCGAAGCCATAGACCAAAGTTACTGCACACGTTTTAGCGATGGTGTCAGTGGAATGAGTGTAACAGCTTTAGCTCAATTCTGTGGAGTAGATAAGCCAGCAATCACACAACTGCTAAACCAAATAAGTGATTCTGACCCGTTCACGAATGATCTAAAAATTTCGCTGAAACCCTATGCTGGTAATGACTGGAGGCTGTTAACGAATGAACCTTCCGGCAGAGTTTTCATTATTGACGAAGTTTGTCATGCAGTTTTGGAATATTACG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCTACCGATTGGGTTAAATCGGAATTATTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.30,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //