Array 1 17246-20450 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAMQZ010000006.1 Pseudomonas stutzeri strain 95A6 NODE_6_length_165797_cov_64.043315, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 17246 29 100.0 32 ............................. CAGGCCATCACCGCCATGCCGGAGGCCACGAT 17307 29 100.0 32 ............................. ACTGCCAAACCCTACGCGACCTCCTCAAGCTG 17368 29 100.0 32 ............................. TGGGTCGGCCAAACGCTGCCACTGATGCTGAC 17429 29 100.0 32 ............................. CTCTGATCCCAACCGAACCACCCGAGGCGGCC 17490 29 100.0 32 ............................. ACGTGCGCGGCCAGGCGCCTGCTATTACCGCT 17551 29 100.0 32 ............................. GTGCATCGGCTGATTAGCCGGCGCCCCAACGA 17612 29 100.0 32 ............................. TACGCAGCGGGCTCTGCGGGCCAGCTCAGCAA 17673 29 100.0 32 ............................. AACCCGGCCCTGGGCATCGACCTACCCAGCAA 17734 29 100.0 32 ............................. GCAGCGGGCGGTTCATTCACCTGGACATGGCA 17795 29 100.0 32 ............................. CCAGCGACGCGGCATGGATCCGGTTTGCGGTC 17856 29 100.0 32 ............................. TACGCCCACTTCAGCCCGGGGCATTTGGCTGA 17917 29 100.0 32 ............................. TCGCATCGCTGGGCGTGGCTGGTGATGCGCTG 17978 29 100.0 33 ............................. CACGGTGCAAACCGCCATCCTCGCGGCCACGAC 18040 29 100.0 32 ............................. TCAGCACCGAGCATCTTGAAGATCGCGATAGT 18101 29 100.0 32 ............................. ACGCTGACCGTGTTCTACGCCGACACGCGACA 18162 29 100.0 32 ............................. TGAATTCCACGGCGCGCCTAGAGGTTGACATG 18223 29 100.0 32 ............................. GCTACCACGCCGCCGAGCGACACCGCCGCACC 18284 29 100.0 32 ............................. GTCGCGAACTGCAACTGACTGACGCTCTGGCG 18345 29 100.0 32 ............................. TATGCCACTACAGATTCAGCATCTGCCCATGG 18406 29 100.0 31 ............................. CGACCTACTTAGCCCGCAGGTGAGGTGGGGG 18466 29 100.0 32 ............................. CTGAGCGAAAAGGATCTGGCGTTAGCGATTGA 18527 29 100.0 32 ............................. TGTGAGATTCCATCCTCTACGCTGCCCTTCCA 18588 29 100.0 32 ............................. GCTCCAGCAGCCGCCATGTTTTGCGGTCGGGT 18649 29 100.0 32 ............................. ATGAATCTGCCCGAGGGGTTCTTGCAGCGCCG 18710 29 100.0 32 ............................. CGTCTTTGCCCACTCGCTCAGAAACGCGACTA 18771 29 100.0 32 ............................. AGGCGCCCGTTCTAGTTGGAATGGATAACCCC 18832 29 100.0 32 ............................. ATTACCGCTAGCCATTGCCCCAGTTATCTGGC 18893 29 100.0 32 ............................. TGGGCAACGACTGAGCTGGAGTGGAACATCTA 18954 29 100.0 32 ............................. AATCCCTTCAGCGCAGAGGATTACCTGCTGCC 19015 29 100.0 32 ............................. GCGTCGAGCTGGGCGGCTTCGCTGAGGGCCAT 19076 29 100.0 32 ............................. GTGACTGAGTGGTTTAGCGAGTGCCGGCGCGA 19137 29 100.0 32 ............................. GGCTACACCAAACTCAGTCAGTCGATGCCAGC 19198 29 100.0 32 ............................. GGTAGCATTATAGTGATTGCAACTTGAGGCGA 19259 29 100.0 32 ............................. CCGTGCCCGGTATGCGATAGCCCGCTGGTTGA 19320 29 100.0 32 ............................. CCGCTGTGTTCATCCTGATCGCAATCGTCATC 19381 29 100.0 32 ............................. GTGTACCTGCACCCCGAGCTGAACAGCGTCGA 19442 29 100.0 32 ............................. CTGAAAACCCCGGCCGACCGCGCGGACTTCAT 19503 29 100.0 32 ............................. CCCAGCCACGGCGCTGGGCTTTTTTTCGCCTG 19564 29 100.0 32 ............................. GCAAATCGGGAAAACTATCGGGGCGTGCTGGT 19625 29 100.0 32 ............................. CGAACGACCGCTGCGCTATGGGTTATCTATCC 19686 29 100.0 32 ............................. GCGGTGAGCCACAAATCATCGCAGCCTAGCGT 19747 29 100.0 32 ............................. AGAACTACAAGTACCGCAATGCCAATTCCAAG 19808 29 100.0 32 ............................. GTAACGCTGTTTTTGTGGAATGCCAGCCCGCC 19869 29 100.0 32 ............................. CCCGTAAAATCGGGGCAGGCAATCTCAGCGAA 19930 29 100.0 32 ............................. CATAGCCGCCGTCTGCCCAGCGTTGTAGATGC 19991 29 100.0 32 ............................. CCGATTCGCTACGTGTCTCAGGGGCTGACCCC 20052 29 100.0 32 ............................. TCGAATAACTGTTCCTCCAATCTGGAGTGGGT 20113 29 100.0 32 ............................. ACTGGCTTACCGAGCATGGCATCGACTATGAC 20174 29 100.0 32 ............................. ATCGGTAATCGCACCTTCACCGTTGAGATGCG 20235 29 100.0 32 ............................. CGTTCTGCGCGATGCCTACTGCGTCGATGTAC 20296 29 100.0 33 ............................. GGGCTGGTGACGCTCGACATCGGCTACAACGAG 20358 29 96.6 33 ................T............ GCTTTCGAGCTGAACGAGAACCTGCTCCCGAAG 20420 29 93.1 0 ............T.............T.. | TG [20442] ========== ====== ====== ====== ============================= ================================= ================== 53 29 99.8 32 GTGTTCCCCGCGCCAGCGGGGATGAAGCG # Left flank : GCAAGATCATCCCGACCATCGAGGAAATGCTCTCCGCTGGTGGTATCTCACCTCCAGAGGCTCCACCCGAATCGGTGCCTCCTGCCATACCCAACCCGGAAAGCCAGGGCGAAGTCGGGCACAGGGCCAAGTGAATGAGCTTTCTGACTGTCATTACCGAAAACATTCCGCCCCGCCTGCGTGGCCGGCTGGCGATATGGCTTCTGGAGGTGCGTGCTGGCGTCTATATCGGTGATGTTTCTCGGCGCACCAGGGAGATGATCTGGGAACAGCTTGAGGCAGGCCATGAGGATGGGAATGTGGTTATGGCCTGGGCCAGTAACAACGAGTCCGGTTACGAATTCCAAACGCTTGGAGCAAATCGGCGTGTGCCGATCGACTATGACGGTTTACGTTTGGTCGCTTTTCATCCCATGGAAAAAACTGATCTTTAACAAGAAAAAGTTGGTAGATTTTTAGTGACCGGTTTTTCTTTTAAAGAACAGTTGGTTACGCTAAGT # Right flank : GCAAATAAGAGTAAGGCAGGATGATATGAAAGCGCTCCCGCCGCTGCTGAATGCCCATTGCAGCACAGCTATAAAAACTCGAGCGAGCGCCGCCGCTACCCCTGTCATCAATGAACAGGCAAGATGACTCAAAGCTACGCAGTTCAGGAATATCTCTTGTGAATACCGATTCCCCTTGCTTTATCACCATGCCAACCGCCGAGGCGGCGGTTGATCGGCTGGCCGAGTTGCATCAGCAGGCGTCTGCGGCGCTGCATCAGGCGCTCAAGCGTTATGTGGCCACGCGCAGTGAGCCGAGTGCGGCGGAGCGTGCGTTGTTTCGCTATCCCGAATTACGTCTGACCTATGCCTGCCAGGGCGAGGTGCCGGCCTCTACGCGCGCTTATGCCAAGGTGCAGGCGCCGGGTGTCTACAGCGTGACCGTGACGCATCCGGCGGCGTTTCGCGGTTATCTGCTCGATCAGCTCAAGCCGCTGATTCAGGACTTCAACGTCAAGCTC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATGAAGCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //