Array 1 595067-593909 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQZO01000003.1 Clostridium amylolyticum strain DSM 21864, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 595066 36 83.3 30 ..A..T...T.C.....G...............T.. TTATATCTATATTAATTATATCAATTATTT 595000 36 100.0 30 .................................... TAACTGAAGTATATAACGCTAAAAGGGTTA 594934 36 100.0 30 .................................... TAACAGAACAAGAGATGGAAGATTTGTACA 594868 36 100.0 30 .................................... CATTTTTACTAAAAATAACAGAAAGACAAG 594802 36 100.0 30 .................................... TAGTCTGTTGAGGTATATCTTCTCCAATGT 594736 36 100.0 30 .................................... ATTCACTTAGTTCTTTATCCCATGCTATTT 594670 36 100.0 30 .................................... TATGCAATCAGCATCTAAGTATGATGTACC 594604 36 100.0 30 .................................... TTTCTGCCTTAACAGGCCTTAAAGCCAATG 594538 36 100.0 30 .................................... TTGTAGACGCGCGACAAGGGAAAGCAACTC 594472 36 100.0 30 .................................... AGTGTTAAACGGGGAAGTTAGGTAATTTAA 594406 36 100.0 30 .................................... TTGTCTTTCGTAGGTTGATACTTTTTCTTG 594340 36 100.0 30 .................................... CAACAGTAACCTTGGAACTTAAGCCAAGCG 594274 36 100.0 30 .................................... TAGGAGGATTAAAAATGAGTGAATTAATGA 594208 36 100.0 30 .................................... TCCTTTGGTTTATTTACCTTTACATTTTTA 594142 36 100.0 30 .................................... TTGGCTATATTAGGTATGTCCACAGCTATG 594076 36 100.0 30 .................................... AAAAGCAAATTGCAATGGCTTATGCGAAGA 594010 36 100.0 30 .................................... GTCATATATAAATACGCCGATATCATAAGG 593944 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 18 36 99.1 30 GTTATAGTTCCTAGTAAATTCTCCATATGCTATAAT # Left flank : CTTTTCTATATGATATTTAGCCCAAAAGGCATTGTTATCAGTCAATCTAATAACCTTAACACTTTCTATATCAAACTCGTCTATATCTTGAGAGAAATCCTCATTGCTATCATACCAAAATACAATATGACGCTTTTTTCCATCACCTAAGGGCTTTGAAAATAACTCTTTTAGAAAGTTTCTTATTTCCTGTAAGTTCATATGTACACCTCTTTGAAAATGTCATTTTCTATATGAAGCATTGCTTATTTTTTAAGCAATGTCACTTATAGAAAATGACATTTAAATTAACTTTATTTTCTTTGTAAATCTCTTTGTAAATTTATTTATTAATCACATTTTACAAAGAAAAATCATTTGATATTAATCTTTCTTTGCTAATTTCCATACTGAAAACTTGGCGCTCTGAGAATCATTATAAATAATCTTATCTACCTTGGACATCTCTTTGATTATATTACCAATTTTATAATATTTTTGTTTGTTATCCACGAATTCCG # Right flank : AGGAACTGGCAACCCCCTTGAAACAACTAGGTTTCAAGGGGTTTTTACCTTTTAAAAAACATTCAATTGGCTTGAATTTATATTCTTTTCTTGCGGATTTGGTGAACCTACTAAAAAAGTCATTTCACAATATTGTTTTTCTGTTATTTGGAGATATCTAACTGATCCTTTAGGTGGTAAATTCTTTTTAAGCCTTGCAATATGCTTATTTGCTCCATCAATTCCATTACAAATCCTAGAATACACAGAGAATTGAATCATTATGTAACCATCGTTTAATAAAAATCTCCTAAACTCCTGATACGCCTTCCTATCTTTCCTCTCTACAACAGGTAAATCAAAAAATACTAATAATCTCATAAATCGCCTACTCATAATAATGGTATTCCAATTGTTTTATTGTAGGTAACTTTAATAATCTAAAATCTTTTTTACTACAAGCTGTTGTATAAGAGGCAACCATCTTGTCTATAGCATTTAAAATGGAATGATTTTGCTCA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATAGTTCCTAGTAAATTCTCCATATGCTATAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: R [matched GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.77 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //