Array 1 16129-15968 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIUL010000031.1 Blautia massiliensis strain MSK.16.77 NODE_31_length_22658_cov_440.766, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 16128 30 96.7 35 .........................A.... CAGATCAGCCCATTTATCACAACCTTGATGCTTTC 16063 30 100.0 36 .............................. TAGTACGATTCCAGAATTTCTTTGTAGTGCATCCTT 15997 30 96.7 0 ......................G....... | ========== ====== ====== ====== ============================== ==================================== ================== 3 30 97.8 36 TTTATTTCTCTCCAACGCACAGAACGGACT # Left flank : CCCCGTTAACGATCCCCTTCACAACAACATCCAGCACCTCACCCGAATCCTGAAGCTCCTTCAGCCTGTCCCAGGCAAGCACATCCGCAGCATCCGCTCTGGAAAGAAGAATATTCCCCTGACCATCATCCCTGCGAAGAACCATCGCCTGAACCTCATCCCCCGGCTGAACAGCCTCTTTAATATTAAACCCCGGCACCCGGGAAAACTCCTCCACCGGAATAAAACCCTCAGCATAAAACTTAAGGTCAAGAACAACCCCCGACTCATCCACACTCACAACAGTCCCTGAGATAATATCACCCTCATCGATCCTCTTAAAAGAAGCCTCCAGCTCCCTCTCAAAATCCTTCATAGACTCCGCCATATCCAGACCTCCCATTCAAACAAAAAACCAACCACCGCCGCCCCAAACCAGACAACTGCACTATAATCCTAATCATTATAGCATGCACACCCCACCCGCGCTATATTTTTTGCACTGGAAATTTCTTACCCCC # Right flank : GCCGGAGGGGCGGCTGCATGGTCGGGACCCGGTGCGTCGGAGTAAGCCGCTGGTCATACTTAGCGCCTGAGGCTTCTGACGGGAAGGTACTCTGCGGCCACAAGCCGCAGAGTAAGCCCCATCTGTCTGAGCCAGGTACGCATCAGCGTACATGGCGAGTTATGGGGCGCCCTGCACGGCAGAAGACTCAGACGCTTAGTATGCCCCGGCGAAACGACCGCACCAGGCACGACCATGCAGCCGCCCCTCCGGCAGTCCGTCCGTCCCTCCCTCCATCCATCCCCACCCACAAAAAAAAAAGAGCCCAAAAAAGGCCCAAAAACGAGGAGTGCCCCGGTAGTGGCTTACCGGGGCGATTATTATGAAAAAAATTGTATGTGTAATGATACAGATACACACCATTACAGCGTCTTTCGTAACGTTCTTTCGAACTATCCCTATACTACCAAACAAATATGAACAAACAATGAACATCTCGTAAACAATTAGCGCATTTGCAC # Questionable array : NO Score: 2.56 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTATTTCTCTCCAACGCACAGAACGGACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: R [30.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 40201-41018 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIUL010000005.1 Blautia massiliensis strain MSK.16.77 NODE_5_length_169027_cov_271.549, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 40201 32 100.0 34 ................................ TGCAGAAAGTTGGCATCCTATGATTGCTGCAACA 40267 32 100.0 34 ................................ AAGAATGTTAAAATAATTGCCCACCCCTATACCC 40333 32 100.0 33 ................................ CCTGTATTCCATCCACCTTCACGGCTGTGATTC 40398 32 100.0 33 ................................ ATAAAGAAGCAGCTGCCGACAGTCGGCATCGGA 40463 32 100.0 33 ................................ ATAAGAACTGCCGCCCCACTGTGCTTTTACACC 40528 32 100.0 33 ................................ CGCTTACTCCACGAGTTACAGTATACTGCCACC 40593 32 96.9 34 ...................A............ TCTGTCTTTGCGGTGATCTCGTGCGGATCCGGAA 40659 32 100.0 33 ................................ GGAAAAGAAGCAATGTCTGGGATGCTTGCTATC 40724 32 96.9 34 ...................A............ CTGGATATGACCTTAATTTTTTTTCGCATTTCGT 40790 32 87.5 34 .........T...CA....T............ CCCGATCACATATGCGATCACTGTAGCTCCAGCC 40856 32 93.8 34 .........T...C.................. GAGTGTAGAAGATAGTGATAGCCTGGTTGATGAT 40922 32 100.0 33 ................................ ATCAACGCAAAGAGATTCGTGGAGATTGAAAGG 40987 32 93.8 0 .............T.........A........ | ========== ====== ====== ====== ================================ ================================== ================== 13 32 97.6 34 GTCGTTCCCCACGAGGGAACGTGGATTGAAAT # Left flank : AGGAGATTTGGACAGTTATCCAGTGTTTTTGTGGAAATGAGGTGACAAAGTGTTGGTAGTGATTACTTATGATGTAAATACAGAGACAACTGCAGGAAGAACTCGTTTGCGTAAAGTGGCGAAGCAATGTACAAATTATGGAAGAAGGGTGCAAAATTCTGTATTTGAGTGTATTTTGGATAGCGCTCAAAGTGTTGCTTTGAAGGGGATATTGTCTGATATTATTGACAAAAATAAAGATAGCTTACGTTTTTATTACCTCGGAAATAATTATCAGACTAAAATAGAACATGTAGGTATAGAACGTGGAATTCCAGTAGATCAACCTTTAATTATGTAGGTGCGAATCAGAAGTACACATAAAATGCCGGCAGGATTCGCACTACAAAAATCAGAAAAGTAACATGAATAACACTAAAGAAAAGAGAGAAGGGATAATAAAAAGTAGAAAAATTATATTTATTGCATAAAAAAACAAAGAATATTTGTGAAAATTTGCC # Right flank : TAACAAAGAGGAAATCAAACGGTGTGGTACATGGGACATTCCCTATGCGGGGACAAAAACCGGAAATCGCAATTAATACTTGCATTTAACAGACATTGGTGTTACAATGAACGAAACTAAGAACTTGTTGGCATAGGAGTGGGCGAGAGCCCGCTCCTATTTGCTGAGAAGGAATTTGTTCAGAAATAGGCAGAAATAGGAAAGGCAGGTGGGAAGCATGAGCAGACGGGAAGAATATGAACAGAAGACAGAGGCGATCCTTACACCAATCGTGGAGTCCAGGGGCTTTGAGCTGGTAGACGTGGAGTATGTCAAGGAAGCCGGAACCTGGTATCTCAGAGGCTATATCGACAAGCCGGGCGGAATCACAGTCAATGACTGCGAGGACGTAAGCCGTGCATTCAGCGATATACTGGATGAGCAGGATTTCATCGAGGACAGCTACATTATGGAGATCAGTTCTCCGGGACTTGACCGGCCTCTTAAAAAAGAAAAAGACT # Questionable array : NO Score: 9.14 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTTCCCCACGAGGGAACGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : NA //