Array 1 5457-5663 **** Predicted by CRISPRDetect 2.4 *** >NZ_JNJP01000005.1 Bilophila wadsworthia ATCC 49260 T370DRAFT_scaffold00005.5_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 5457 28 100.0 32 ............................ TTGACCGAATTGAGCAGCGGCATCCGAAATGC 5517 28 100.0 32 ............................ AATATGTTGCTGGTTATGTGACTAAAAAATGT 5577 28 100.0 31 ............................ AACCGGAGCGACAGCGCGTTCCCGTCACCGG 5636 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 4 28 100.0 35 GTTATCCGCCGTGTAGGCGGCTTAGAAG # Left flank : GTACTCATTCACTTCTCCTAGCTCTTTTGGTTGGGGTCATATTTTCTCCACGAAGTAGCCGGATGGTGAAGTCCGCATGGGCCGCATCAAAGCATGTGTATGGTGATGACAGTCTTTCGCGCCACTGGTCGCGCTCTTCTTTTGTTGGGTTCATATCATTTTTATCCCTTTAGTGCCTTGTAAATACGGACGACAACTTCTTACAGTTCTGTTTTTTCATTCTGGGCATGTTCCAGTTCCCGGCACAGCCTGAAAATGGTAGCCGCTGACCCCATCTCGTCGAGCGCCTTGGAGTCTCCGAGCATGTCGCCAATGGCGGCGGTTCGGATGTAGTCGAGTTCTTCGGGGGTGATCATATCTTTCCTTTGGCTTCATAAAAAAGTTGTCTAAAAAAGAGATTGAGAATAAGGTAGTTACAAATAGAGAGGAAAAGCGAAGCTTCTGAAGTCTTTTCAGGTGTAACCTACTGAAAAGCAGAGATACTTTTGTAAAAGCCTCTA # Right flank : GTATCTGGTCGGACGCCTAGCCACTTCATCGGCATCACCCCCTTCCAGGACCAATTGCCCACAACACCCAAACGAAAGGCGACCCACATCAAAGTGAGCCGCCTTTCGTTTGGGGTCATTCGTCGCCTTCGTATGGTGTTACATCCAGCACGTTGTAGGCGTACCTGTGCCGTCGGGATGGTTTGCCCCCTTCCGTGATGGGGAGCACGCGCAGGTCGTAGTAGGGGTAGGAGGGGGTGAACAGGATTTTGTCGACCTTTGCCGGACTGGTGCCGTCGCGATCCCATCCGGAGACGATATCGCCTTCCTTGTAGGGGCAGGCGGCGACGGCGGCGTCACGTTTGGCTACTTCAAGAGCGTTCTTCGCCTGTTGCACGGCGCGTTCGCACCTTCTGACCTCATCAACGAGTTCCATGATTTCAGCGTCGTTCATTACCGTTCCGTGTGATGCGTGTTGAGGTTATGGGTTCATCTTTTGCCTGAGCTGGTCGGCAAGCTCG # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATCCGCCGTGTAGGCGGCTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTATCCGCCGTGTAGGCGGCTTAGAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.50,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [63.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 5142-4754 **** Predicted by CRISPRDetect 2.4 *** >NZ_JNJP01000083.1 Bilophila wadsworthia ATCC 49260 T370DRAFT_scaffold00081.81_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 5141 28 100.0 32 ............................ TATAAACGACCCTCATAGATTGCCAGGTGAGT 5081 28 100.0 32 ............................ TTGACCGAATTGAGCAGCGGCATCCGAAATGC 5021 28 100.0 32 ............................ GATCGGCATGAAGAGCGAGTTCCGCAACATCG 4961 28 100.0 32 ............................ GATGAGGCGCAACGGCACATACCAATGATGAA 4901 28 100.0 32 ............................ TGTATGAGCAGCTTGAGCATGGATACGGCCTC 4841 28 100.0 32 ............................ AAGGGGATGCTGCTGGCGCAGTTCCGCACGGT 4781 28 96.4 0 ..........................G. | ========== ====== ====== ====== ============================ ================================ ================== 7 28 99.5 32 GTTATCCGCCGTGTAGGCGGTTTAGAAG # Left flank : ACGCTGGGCCAAACGTTTGTATGCGGATCTGGCGCGAGGACATGGATTTTCATTCGTTCGCGAAGAAGGCGCGCGGCGTTCAACCTCAAAAGCGGATGTCTGCAACGGCTTTCTGGATCATGGCAACTATATCGCGTATGGATATGCCGCTGTGGCGCTTTGTGGTCTTGGGATCAGTTTCGCCATGCCCATCCTGCACGGGAAGACGCGAAGAGGCGCGCTGGTATTTGACCTCGCGGATGTGGTCAAGGATGGTTATGTCATGCCTCTGGCCTTCGAGTGTGCCAAAGAAGGAGAGACACAAAAAGATTTCCGGCAACGCCTTATCGAGCACTGCCAAGAGGAAGATGTTTTGGACTTTCTTTTTGACTTCATGAAAAACCTGTGTGTAAAAAACACATGATATAAATGTGTTACATCTAGCTCACCAAAACGAAACCTTCAGAAGGATTTGAAATACAGTCTGCTGAAAAATAAGTATATTGTTTTCAAAAACTCTA # Right flank : AAAAGTTTCGCTGTCCACACGGTGAACGTAATCAGGCGTTGATGCTCTGCTCGCTTGATTGTGATTTGTCCGGTGCTCATCCCGATAGAAAGGCGAAAGCGGATGGTCGGTTTATCATCACGTCGTGGTGGTGCCTGCATAAGTGCAGGTGGCTCCCGGAACATCGAGACGAGATTCGATTTGTGGCAAAGAAGTCGGACTGAAGAAACCAAAAAACTCCACCTTCCGGCATGAATCGGAAGGTGGAGTTTTTTGGTGATTCAACATATGAAATTCCGTGGAACAGTAATCTCGGGAAGACACCTTTTGCCGTCTGCACCACATATTTTGGTGTAACATTAATGTTACATGTTGAAATTCCTAATTAACATTCTTTTTTTATGGAAAAGGGAGGACCACCGCCTCGTTCGGCGCCTCCCCATTGGGGCTATGCCGTCGGGCAATCCCCCCTCAGGAGCATTACCAGCCTTGTGATGACCATACCACAGAAAACCACCGTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATCCGCCGTGTAGGCGGTTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTATCCGCCGTGTAGGCGGCTTAGAAG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.20,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 13425-13572 **** Predicted by CRISPRDetect 2.4 *** >NZ_JNJP01000083.1 Bilophila wadsworthia ATCC 49260 T370DRAFT_scaffold00081.81_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 13425 28 100.0 32 ............................ ATCAGGACCACCTGTAATGAAATCCTCAAAAC 13485 28 100.0 32 ............................ TCCCCGCGGCTACTCCACGGCTTGGGGCTCTA 13545 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 3 28 100.0 32 GTTGTCCGCCGTGTAGGCGGTTTAGAAG # Left flank : GGTAATCCGGCGATACCCTGCTGGAAAATGGCCTTCAGGCCCGAAACGTCCCCGTGCGCCCACTATCCAGAGTAACTTCATACGGCGGCGACCATCGTTCTGGTAGCAGGCCACGGAAGTCTGTCGTGTAGCGCTTCGGGCTAAAGCGGCGCGCACTTCCTGCAACCCTTCAGTCGTCATAGGCGACATCCAGCAACGTTCCCCTGCGCGCAGGGCGTAGCTGTCCAGTATGGCGCGGCTGCGGGGAATAGCCCGTTTCTGGCAAGCGGAAATGAAGATGACGTGCATAGAAGAAAAGGTATCGGTTTATACAGATGAGAGCAATATGACACGGGGAACAGCATCTCATCTTTTTTGTAGCTTCCTTTTGGCTTCAAAAAAAGTTGTTCGGAAAAACCTTTTGGAATAAAGTAGTTAAAAAGAAGCGATGCGGACGAAGCTATTGGAGGTGCCAAGATGTAATCCTTTGAAAGATAAAGATATTGTCTCGTATCGCTCTA # Right flank : GGGCTCATCGAAGAATCTTTTATCATGAGGTTCCCCTTCCTTACTCGCCGCCGATGGAACGGGCGCAACGGTCGTTCTCGTAACTCGCCGTTATGAAGCTGACCCCGCCCCACGTGAAGACTCCGGCGTTCTGCCGGGCGTCGACTACCCCGCGACCCTTACCCCCGCCGTGGGCCTGTAGGAGGTGCATCATGTCACAGTGTGAACTCATGCCCATGCCCGCGCCTTTGGTCGTCTTACACGACGGACGCCCCACCACCTCTCTGGAGATCGCCAAGTTTTTCAAGAAGCGTCACGATGTTGTATTGCGGGATGTTCGTAATATTATGGATAACTGACCGGAACCGTTTAGCCACCACAATTTTGTGGGGCTAACTATATTGATGATCAAGCCAAGAATCGCCCCATGTTCATCATCTTCAAGGACGGCTTCACTCTCTTGGTGATGGGCTATACAGGCCCCGAGGCTATGCGCTTCAAGCTGGCCAACATCGAAGCCT # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTCCGCCGTGTAGGCGGTTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTATCCGCCGTGTAGGCGGCTTAGAAG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.70,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [63.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //