Array 1 611045-612597 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP007524.1 Neisseria meningitidis strain 510612 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 611045 36 94.4 30 ........G...A....................... TTTTTGTATCCATTCCCAGCCGGAAATTAA 611111 36 100.0 30 .................................... CTTCTGCCTTTTTACAAGCTCGCTTTCTTT 611177 36 100.0 30 .................................... TTTGGTAAAGGTTTCTGTTGCGACCCGAAT 611243 36 100.0 30 .................................... CTTTAACTTTGACCGTGTGCAATCCAGTTA 611309 36 100.0 30 .................................... CTTTAACTTTGACCGTGTGCAATCCAGTTA 611375 36 100.0 30 .................................... AACGGCAACCCACTAAATTTTGCAAATGCG 611441 36 100.0 30 .................................... AGTATTCGTCGATGATGGAAACTCGAGCAT 611507 36 100.0 30 .................................... ATGATGCAGGCTGCTCCGTCATCGTCTGCA 611573 36 100.0 30 .................................... TTTCTTTTTGTAATTGTTCTGCCTTTTTTA 611639 36 100.0 30 .................................... CAATAACGGCGAGTTTACGCATCAATGCGG 611705 36 100.0 30 .................................... TACCCACGGCGGAAACCATTGCCACAAAAC 611771 36 100.0 30 .................................... TTAAAATAATAACCCAATACACGATGTTAA 611837 36 100.0 30 .................................... TCCTGCCAATTATCATACATAAGATTTTGC 611903 36 100.0 30 .................................... TTGCGTCTATGGTGTCCTTTGAGATGTCCA 611969 36 100.0 30 .................................... AAAACCAACCGGGTATTCATACACAGCCAA 612035 36 100.0 30 .................................... CCGTTGATGACGGATGTGTCGGGTTGCGGA 612101 36 100.0 29 .................................... TCGGCCGCTTTATTTCTGCCATATCGACG 612166 36 100.0 30 .................................... CCTATGCCTGTTATTGTTTTCAGCCTTTTG 612232 36 100.0 30 .................................... TTTAAAACCGCAAACCAGTTTGTATCCTAT 612298 36 100.0 30 .................................... AATAACAACCATTTTGTTATTTCGATTTTT 612364 36 100.0 30 .................................... TCCCGACATTGACGGAAAAACCCGAAAGCA 612430 36 100.0 30 .................................... TTATGCCGTTTTCATCCGGCTTGAACATTT 612496 36 100.0 30 .................................... TTGCGCATGATGGCAACGATGATTACCATC 612562 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 24 36 99.8 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAACGGTCGATGTGTCTGGCAATCATGGCTTGGGCGGTTTGTTGAAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : TACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: F [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.40,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.68 Confidence: HIGH] # Array family : NA //