Array 1 2500121-2500593 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP041725.1 Staphylococcus lugdunensis strain SL117 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence                        	Insertion/Deletion
==========	======	======	======	=====================================	=======================================	==================
   2500121	    37	 100.0	    34	.....................................	CTCAGTATACTTTTCCATATATTAAATCACTGTA     	
   2500192	    37	 100.0	    39	.....................................	GAGTGGTTTTTTTATTTTGCATTTTAAGCCCTTTTTAGG	
   2500268	    37	 100.0	    36	.....................................	TCTGTATTTCTATTAACCAATTCATAAGTGTCATTA   	
   2500341	    37	  97.3	    36	....................................A	TATTTTACTATATGCTCATATCCGCCGTTTGTTTCT   	
   2500414	    37	 100.0	    34	.....................................	GGTAAATCTTCTACACTGTCGACTGGGTCTTCTA     	
   2500485	    37	 100.0	    35	.....................................	GTTCCAATTAGCTAAAGATGTTATGGACGGCAAGA    	
   2500557	    37	  89.2	     0	..............................A.A..GA	|                                      	
==========	======	======	======	=====================================	=======================================	==================
         7	    37	  98.1	    36	AATCAGAGAATACCCCGTATAAAAGGGGACGAGAACT	                                       	       

# Left flank :   GATTTTTTAGAAGTATCATGATACAATTTGATGCTTTTTTTGAGTCTCATAAACTTTATGATAAAGAAACATTGGAATTTTTAGAGCAAAATGTAAATATAGTTAATTATAAATTGAAAAGTGTCCGTTTTCATATGGAAAAGGTTAAAATTCCATCTTTTAAGGGAGAAATTGTATTTAAAATAAATGGGCCATTGCCGTTTTTACAATTAGTTTACTTTTTATTAGCTTTTGGAGAATTTTCAGGTACGGGTATAAAGACTAGTCTAGGTATGGGGAAATACAATATAGTTGATAAAAATCAAGATAACTAAAAAGTAGTTACACTTCATAGTCCATTTAAAACAAATCGAATTTATAGTATAATATATATAGGGAAATAACCTTTAAGTGTCAAATTTTTTGACAAATAAGGTATTACCTAGAGTTAGATTGTCAAAATTTTTGCCAATTTAAATTATCCTTCAAACTTAGGCAATACTGGATTGAAATTAATTGCT
# Right flank :  ATGTTAATATTAAGGTTTTTAAAAAACTAGATAATAACCAAAGCGCTAACTCTGCATTTGAGTCAGCGCAGTTTGTTTTATTATTTAAAAAATTTAAATGATTTTGACAATCTTAAAAAAGGTTCTGTTGATTTTAACAAGAATTAATGAAAAGTGTTGATAGTTATATAAAAAATTGGGAGATGTTGAAATTATGGAGGAAGTACTGGATTTAATAATAAATTTAGTTAAGTTATTTATTATAGTTCCGTATTGGTTGATTAGTGTTGGTGTAACTGCCTTTTTTTATTTTAAGCTTGTCGTGTTTATTCGGAATACATTTAAAGCTTTTTTTGATAAATACTTTTATGGCGAAGACAGTGACTCTATTCCTTATGCTGTAGGTCCATATATAATGATAATAACTGCTATGCTTATTGGATTAGGAATAGTTATGGTAATTGTTTTATTTTTTAATGCACTTTTAGGGCAAAATTTGTATACCCTATTATTTATAGTTG

# Questionable array : NO	 Score: 6.16
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     AATCAGAGAATACCCCGTATAAAAGGGGACGAGAACT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:56.76%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-7.80,-6.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-5] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.78,0   Confidence: HIGH] 

# Array family : NA
//