Array 1 132527-123836 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHCSG010000003.1 Williamsia sp. CHRR-6 contig00003, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 132526 29 100.0 32 ............................. TCTGGTGGTCCGGAGTCCAGCTCGTGTTCAAC 132465 29 100.0 32 ............................. TCGGATTATGGCGCTAATTTACGGACTATTGT 132404 29 100.0 32 ............................. TTCGCGGCCGACGATCGACTACGCGAGTACTA 132343 29 100.0 32 ............................. CGTCGCCTAGCGCGGCGCGAGGATGCGCACGG 132282 29 100.0 32 ............................. GCGTGTCGGGGGCGCCGGGCCGGGAACGGTTC 132221 29 100.0 32 ............................. AGCGGCAGCACGCGCGGGAACTGGAACACGGG 132160 29 100.0 32 ............................. TGGAACACGGGGATCGGTAGCAGCGGGTTAGG 132099 29 100.0 32 ............................. GTCCTTCTCGGGCGCAACCCGTACGACTCGCG 132038 29 100.0 32 ............................. GCGACCTCGACTGCCGTCGCTTCTGCGTTGAC 131977 29 100.0 32 ............................. TTGACCGTTGACGATGGGGCTGCTGCTCATGT 131916 29 100.0 32 ............................. AAGTGATTCCATCCTCGGCATCGGCGCAGACG 131855 29 100.0 32 ............................. CGGATTCGGGGTCCGACTTCGCGGCCGACGAA 131794 29 100.0 32 ............................. ACCATCGCGATCAGTTTTCGCGCTAAGCGAAG 131733 29 100.0 32 ............................. CCGAGGAGAAACAATGTTCAACGATGGCAGCT 131672 29 100.0 32 ............................. TCCCTCGCCAACGCGCCCAAAGTGTCCGCGCG 131611 29 100.0 32 ............................. GACTCCGACCCTGGTGTCAGCCCCGACGGTGC 131550 29 100.0 32 ............................. GCTTGGGCAAAGCGATCGCCCGAGGCATCACC 131489 29 100.0 32 ............................. CGGAGCCTTTGCCCGCGCCGTGGGTGGTGAGA 131428 29 100.0 32 ............................. AAGAGGAGCCTTGCTCGCGTCCGCGCCATTGC 131367 29 100.0 32 ............................. CACCGTATCCACGCTCTCGCTCTCCCACGACG 131306 29 100.0 32 ............................. CCAATCCGATCGCGGAGTTTGAAGACCGGCTA 131245 29 100.0 32 ............................. ATGTTGTTTTGCGTCATGCATCTGATGAGTTG 131184 29 100.0 32 ............................. AGGGCGAAAAACAAAGTTTTCCGACTCGTGGC 131123 29 100.0 32 ............................. TTGGGCAGCTAGTGGGCGACCCTAACCTGTGG 131062 29 100.0 32 ............................. TGCGCGGCAGTGAACTCGACTTCTACCGGTGC 131001 29 100.0 32 ............................. TCGCCGAGCTGATCGGAGCGGTCCGCGAAGGC 130940 29 100.0 32 ............................. CAGTAGCACGTCCAAAGTCAGCCACAGCGCAG 130879 29 100.0 32 ............................. TGGTGGTCGGTGACGGACAAGGCCGGGGTCGA 130818 29 100.0 32 ............................. TGGCACGCTGCTGCAGAATGCCGGCGTTGTCA 130757 29 100.0 32 ............................. TCGGAGATCTCCACTCCGGGTACCCGGCTCGC 130696 29 100.0 32 ............................. ACCCTGCAGGCGATTGCCCCACTCGTCGAGCT 130635 29 100.0 32 ............................. GGCTCGATGATGCCGAGCTGCTCCTCGCCGTC 130574 29 100.0 32 ............................. AAGGGCACCGAGCGCGACACGTCATCACGATC 130513 29 96.6 32 ...................C......... ACCAGCGCAGGTGACGCAGATGGCGCAACGCA 130452 29 100.0 32 ............................. ACGATCGGGAACGCCGAATCCGGGAAAAGCGC 130391 29 100.0 32 ............................. CATGGGCACAGCGATATCGGGGCTGACGGTGT 130330 29 100.0 32 ............................. CGTGGCAGGTCCGCCCCACCCCGCACCTACCC 130269 29 100.0 32 ............................. CCAATCCGATCGCGGAGTTTGAAGACCGGCTA 130208 29 100.0 32 ............................. AACGCCGCACAGCTCAACGCGATGATCGCGCA 130147 29 100.0 32 ............................. TACATGCGTGTCATTACCGCCTACCGGCCGTA 130086 29 100.0 32 ............................. CTGACGCGATCTTCGAGGACGGCTTCACGCCC 130025 29 100.0 32 ............................. TCGACTGGCCAACCAACCTATGGATGGGTGTC 129964 29 100.0 32 ............................. GCACCGCCGCGCGCAAGATGGACGATTCGTTG 129903 29 100.0 32 ............................. AGTGTCCAGCCGACTTCGGTGGCGATGCGTTC 129842 29 100.0 32 ............................. TCGGTGTCGTAGGTGCACCCGCTGTGGCACCA 129781 29 100.0 32 ............................. TGGTACAACGTCAAGCGCAACCAGGTCGGCAC 129720 29 100.0 32 ............................. TAGGGCCTGCGCACGTGATTGCGCAAGGGTTA 129659 29 100.0 32 ............................. TGCCATCACGTCCTCCTAGTCCGTGGGGGCAG 129598 29 100.0 32 ............................. ACGGCGTCGGAAGTCATCAGGGGTTGACCCGA 129537 29 100.0 32 ............................. GTCGTTATGTGGTTGTGGAACAACGCAATTGT 129476 29 100.0 32 ............................. AGCAACTTGCGACTGGCGCAGATCAGTGCCCT 129415 29 100.0 32 ............................. GACAGTGAACGCGGTTCGATTGCGCTCAACGA 129354 29 100.0 32 ............................. TAGGGCCTGCGCACGTGATTGCGCAAGGTTAG 129293 29 100.0 32 ............................. TTCCTGCACGGCATGCGCGACCAGCTGGCACA 129232 29 100.0 32 ............................. CGCCTGCGGGTGTGGTGGGGCTGATGCGCATG 129171 29 100.0 32 ............................. CCGTTGATTCCGAAGAAGACGCGAAGCACGTC 129110 29 100.0 32 ............................. GGCACGTTGGTGATCGACATTGTCGACAAGTC 129049 29 100.0 32 ............................. TGCGACCCCGACAAGCCGGAGGAGGCTTTCCT 128988 29 100.0 32 ............................. GAGCCTGTGCCGGATCGCGATCCACCGAATCG 128927 29 100.0 32 ............................. TATTCTTCGACGCGGCGTCCAGCTCGCGATTC 128866 29 100.0 32 ............................. TTTTGCATGGCGTCGCGCAGCTCGGTGAAGCC 128805 29 100.0 32 ............................. ATCGGCCGGTAGGACTGCGGCAGTTGGATCGT 128744 29 100.0 32 ............................. GGTGTTCTGTCTCGGGGTGGCGCAGTGGATGA 128683 29 100.0 32 ............................. ACCCCAGTCGCAGCGCCATCGGCTGCCGAAGC 128622 29 100.0 32 ............................. CACCAGTCCGCGTTGATGTCGAGGGCGAGGTG 128561 29 100.0 32 ............................. TGGCCGCCGCTGATCTCGCTCGAGGAGCATCA 128500 29 100.0 32 ............................. GGTGCGGCGAATGGACCCTCGAATAGGTCCCA 128439 29 100.0 32 ............................. ATGACGGCCAGCGTCAGGCTCGGAGGTGCTTT 128378 29 100.0 32 ............................. TCGTACAGGTTGTTTCCGTCCTGGTAGAGCTT 128317 29 100.0 32 ............................. GATGCCCAGTCACGCCGCCCTGACAGCCACTC 128256 29 100.0 32 ............................. GATGCTTCGACACGTCACCCCGTTGCGCCGCA 128195 29 100.0 32 ............................. GCCTCCGCAGCCACCACATACCCAGCCCACGC 128134 29 100.0 32 ............................. AACACTCGCGCCAATCAGCTTGGCTGGGTGCA 128073 29 100.0 32 ............................. GGGCTCGCCACCGTCCCAGCGCTCAGAAGGCA 128012 29 100.0 32 ............................. CGCCTGCGGGTGTGGTGGGGCTGATGCGCATG 127951 29 100.0 32 ............................. ATGTCCGAACCGGGCAACTACGACGCGACACT 127890 29 100.0 32 ............................. GGGTCCGCTCTGCAGACAACCCTTCTCGACAT 127829 29 100.0 32 ............................. AGGTCCGCACGTTGCGCCGGGTCGGTGACCCC 127768 29 100.0 32 ............................. ACGACACACGACAAGCACCAAGCAATGATTCG 127707 29 96.6 32 ......................G...... GACCCCCAGCGTCGTACGCCGTGACGCCCAGC 127646 29 100.0 32 ............................. TCGCGCTGCCTTTGCTTGGCCAAGAAAGTCAG 127585 29 100.0 32 ............................. ACCTACAACGGAGATAGCCGGCTTTCGTCGGT 127524 29 100.0 32 ............................. AACGCGCACCGTGAAAGACGGGCACGGTCACG 127463 29 100.0 32 ............................. AGGTCAAACATCATCGCGTTGTGGCACAATCT 127402 29 100.0 32 ............................. AGCGCTATCGATTGCGGCTTTTGCGGACTCAC 127341 29 100.0 32 ............................. GCGACCCTCGGCCGCTGTGTCAGTTTCGATCA 127280 29 100.0 32 ............................. CTCGACACCGCACACATGCTCATCGGCGACAT 127219 29 100.0 32 ............................. CGGTGAAATCGTCATCGTCGGCCGCACACGAG 127158 29 100.0 32 ............................. CCTGGCACGTCATCACCGCGCCGTGGGCACAC 127097 29 100.0 32 ............................. TGGATGTCGTTGTGGATCTCGACTGCAAGTTT 127036 29 100.0 32 ............................. TCACAGCGCTTCGTCCACCAGCACAGGCACGT 126975 29 100.0 32 ............................. GCGGCCGCGCGCGCGCGCCTTGAGGAGCTGAC 126914 29 100.0 32 ............................. GTCGCCGGTGTCGGCGCGGTGCAGTTGGGCAG 126853 29 100.0 32 ............................. CTCAAGTGGTATCAGGTCTGGTCGAACCCTTT 126792 29 100.0 32 ............................. ATGGACGGGTTCGCACGCGATCTGCGCGCCCG 126731 29 100.0 32 ............................. AGGTTCTCCTGGACCGCTTTGCGAAACTCGGT 126670 29 100.0 32 ............................. CATATGCGAGGGAATTGGACCGCCGCAGGCAG 126609 29 100.0 32 ............................. GTGGTAGACCCCTGCGTGCAGACACCGTCGAA 126548 29 100.0 32 ............................. CGATCTGCGCCAGCGCCGGACCAAGGTTGCGT 126487 29 100.0 32 ............................. TTCGTCGGCTGCACCGCGACGAACACGCTGAC 126426 29 100.0 32 ............................. TGCCGCAACGCTCGCATGTCTGCGTAACACTC 126365 29 100.0 32 ............................. TACCCCGGAGTATGCCGACACCGTGATCGGAG 126304 29 100.0 32 ............................. TCGTACAGGTTGTTTCCGTCCTGGTAGAGCTT 126243 29 100.0 32 ............................. AGGCTCCAGTACTTCGGCGGGGATCCGGCCAG 126182 29 100.0 32 ............................. CTGTTGAACTCGCGCACGATTCGGTTGAACCC 126121 29 100.0 32 ............................. GTCGTCATTAGCCGCACCGCGCGACGCGAAAA 126060 29 100.0 32 ............................. CACGACTTAGGGAAGTAGGCGAAGTCAGTATT 125999 29 100.0 32 ............................. TCACCGTCATCACCGGAGGCGACGCCATCGCC 125938 29 100.0 32 ............................. CGCTGGCATCGGTCAGCCCGGAGCTGAACACG 125877 29 100.0 32 ............................. ATCAAGGTGCCTGACTGGGTGCCCTCCGTCGG 125816 29 100.0 32 ............................. GTGTCCGACGTGCTGACAGGCATCACCGAGCT 125755 29 100.0 32 ............................. GGCTCGATGATGCCGAGCTGCTCCTCGCCGTC 125694 29 100.0 32 ............................. GCATCGACGCATTTCCCGCGCAGGCCGGTGCG 125633 29 100.0 32 ............................. AGCTGGAGGAACGTCTGCACCAGCGGCATCAT 125572 29 100.0 32 ............................. CGGGGTCCGGGTGGTGGGCACACCACGGGCAC 125511 29 100.0 32 ............................. TTCTGCATGGCGTCGCGCAGCTCGGTGAAGCC 125450 29 100.0 32 ............................. AGTGACGTACGACTGGCGCAGATCAGTGCCCT 125389 29 100.0 32 ............................. TGCGGGCGAGCCGGTGCAGGTGGCACGTAAGT 125328 29 100.0 32 ............................. TGCTTATTTGCTAGTAAGCAGGGTCTCAGTGG 125267 29 100.0 32 ............................. GTCATCATTAGCCGCACCGCGCGACGCGAAAA 125206 29 100.0 32 ............................. CATCCGTGACCGCAGTGCTGGTGAAGGGCGCT 125145 29 100.0 32 ............................. ACGGACGTGGTGGCTGCGCAGCTCCCGGCCGC 125084 29 100.0 32 ............................. GGTGTGGTCGACGTGCTCAAGACCCCCATCCA 125023 29 100.0 32 ............................. AGTGCCAAGACCGAAAGCACGGTCACCTCCAC 124962 29 100.0 32 ............................. CTCCGCAACGGCACGCTGGTGATCGACATCGT 124901 29 100.0 32 ............................. TGCACGACGGATTGATGCTCCATTGACCTGGA 124840 29 100.0 32 ............................. AGAATTCAACGCCGCATGGGACGCACTGCGGA 124779 29 100.0 32 ............................. CGGTGCGCGTTGGCGACGATCCCGGTGAACTG 124718 29 100.0 32 ............................. TCCATGTAGGACCGGAGCGCTTCGCGGCTGAT 124657 29 100.0 32 ............................. AGGCAGTTCCGCACGGCGATCAACTACAACCA 124596 29 100.0 32 ............................. CGTCACTGGATTCTTGAGCGGCTTTGTCGAGG 124535 29 100.0 32 ............................. GCGGGAAAGTCCACCCCGTCACCCGAGAATGT 124474 29 100.0 32 ............................. CGAGTGCAGCACTTCGAAAAGAAGACAGCGAA 124413 29 100.0 32 ............................. TTGGGCAGCTAGCGGGCAACCCCAACCTATGG 124352 29 96.6 32 .......................T..... ATCGTCTCGCGGCCTGCGGTCATGACACGCTT 124291 29 96.6 32 .....T....................... TACACGGCCGACCTCGCGTGGGATCAGTCGTC 124230 29 100.0 32 ............................. GACCTCATCGCGCCCGATCAGCCACCGACCGC 124169 29 100.0 32 ............................. ATCCGGGTCCAGTGATGGCGAAAGTCACTGCC 124108 29 100.0 32 ............................. CAACAATTCTCGCTCAACGAGACGTTCCGCTA 124047 29 96.6 32 ............................A ATCTCCGACGACCTTCTCGACACACTCAACGA 123986 29 96.6 32 ...........................T. AAGGCGGCCGGCGGCACCGACCACATCAGCAA 123925 29 96.6 32 ............G................ GCCCAGCTGACGTGCGATCTGCTTCTCGGGCA 123864 29 86.2 0 A....T...........T.T......... | ========== ====== ====== ====== ============================= ================================ ================== 143 29 99.7 32 GTGCTCCCCGCGAACGCGGGGATGAGCCC # Left flank : GTGTACCTCTGGGACGATCGTGGCCCAGCAGTTGCCAGCGGCCAAAGCCACTTCGCCAGCGAGGACTTTGACGGGCCGTGGTAGTTCTCATCGTGACGGCTTGCCCAGTTGGCCTGCGCGGGCATCTGACCCGGTGGTTACTGGAGATCAGCCCTGGTGTTTTCGTTGGGGTGTTGTCAAAGCGCGTGCGCGATCTGCTGTGGGAACGGGTGCAGGAACTCGTCAAGGACGGCCGCGCCATCATGGTGTCGCCGGCCCGGAACGAGCAGCGGCTCGACTTCAGGATTCATCGCTTTGACTGGGAGCCCGTCGATATCGATGGAGTGAAGTTGGTGCGGCGTCCCCACACCGGAGAGGCCTTGCCGTCAGCCGCCAGACCGCGGGCCGGACGAAGTAAAGCTAGTCGCTACCGCGCAGCGCGACGCAACCAAGGGGGTGGTTGACGAGCAAGTCCAATGATTTTATGAGACGGCGAGCAGGAAAGTCCCAGCTCACCAAGT # Right flank : GTCCGGCCACCGCCAGTGCCAGAGCGATCATCGTGCTCCCCGTGAACGTGGGGAACCTTCCAGCCCGCGCTGCCCCCGCTGAGGGTGCCGGGTCGTACCGTCAGGCCACCCGCGCTGCGGAGGGTGTGGTGATGCCGCGGCGATCGAGGATGGGGCGCACGCCCTCGCCGAAGTGATACGCCTCCTCCAGATGGGGGTAGCCCGAAAGGATGAACTCACTGAACCCGGCGTCGTGATACTCGCCGATGAGGTTCGCCACCTCGTCATGCGACCCGACCAGCGCAGTGCCCGCGCCACCACGGATGAGGCCCACACCCGCCCACAGGTTCGGATAGATCTCCAGTGAGTCGGTTCGACCGCCGTGCAGCGCGGCCATCCGTCGCTGTCCCTCGGACTGCGACGTCGAATGTAGTTGGTGCGCTTGGGCTATGGCCTCAGGCGGGAGGTCGTCGAGGAAGCGCTGAGCTACCGCCCAGGCCTCAGCGGAGGTGTCGCGGGTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGAACGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGATGAGCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //