Array 1 61972-59691 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUNB01000003.1 Baileyella intestinalis strain RF-744-FAT-WT-3 seq3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 61971 36 100.0 30 .................................... AGCCGTGCAGCCGGATAGCGCCAGGTCTAC 61905 36 100.0 31 .................................... AATTAACGGCGGCGATGATGAGGAATAGCAA 61838 36 100.0 30 .................................... CTACACCTGTAGAAATTGGCAGTTTGCTAA 61772 36 100.0 30 .................................... TGAGCATTGCGGTTGATGGAATCATCGGAC 61706 36 100.0 30 .................................... TACCACCATAACAACCACTGGGTTTAAATT 61640 36 100.0 30 .................................... TTTCCGGGTCTTTTGTCAATCTGCCAATAA 61574 36 100.0 30 .................................... ATTCTTAAAAACTCACGCCTTGCATACGCC 61508 36 100.0 30 .................................... TAGTTGTCCTGTTGATTTATCGGTTGTTGT 61442 36 100.0 30 .................................... ATAGCTATGCCATAGGCGGATGCGACTTAT 61376 36 100.0 30 .................................... AATGTGGGACGTTGATCACATCGCAACCTA 61310 36 100.0 30 .................................... TGTTACAATTGCTTCACTGACTCCAAAGTA 61244 36 100.0 30 .................................... TGGGTCTACGTTTCGCCAATTGTAGCCGTT 61178 36 100.0 30 .................................... GCATCGTCCGACGCTGTAATCGTCCGCTTG 61112 36 100.0 30 .................................... GCAGGGTTTGTGAATTCAATCGACGGGTTT 61046 36 100.0 30 .................................... TGTAAGAGATGGAATATTCGATGATCAGGT 60980 36 100.0 30 .................................... CGAAAATACCATCTCGCACAAAGTTATTTG 60914 36 100.0 30 .................................... CTACGGTAATCGGCGGTGGAACTCTGGCAA 60848 36 100.0 30 .................................... TTTTACGATATCGATCTGGCCTGCAAGGTC 60782 36 100.0 30 .................................... TTCATACCGGCTCAGAATGCCGTCAGGGTC 60716 36 100.0 30 .................................... TAGGCCATTGTCCAGGGTGCACGTCTGTAG 60650 36 100.0 30 .................................... AAGGCGAAGTATGGCGAACCTTAGCTAAGG 60584 36 100.0 30 .................................... TTATTTCTCCTTTTTCGGTGCTGTGATTTT 60518 36 100.0 30 .................................... CAGAACCACCCACGCAAAGCTAACCCCTTA 60452 36 100.0 30 .................................... TGGGTCTACATTTCGTCCATTATAACCGTT 60386 36 100.0 30 .................................... CGGCGAAAAACTGCATACGAATTAACAGCG 60320 36 100.0 30 .................................... GACAACGATGAGACCAACAAGTAGACAAAA 60254 36 100.0 30 .................................... GAGACCTCACCCGGAGGAATCGAAGCGCCT 60188 36 100.0 30 .................................... CGCCGCGAGCGTCATGCAAGAAGTGCGTAA 60122 36 100.0 30 .................................... CCGCAAACAACCCAACTGGCTTTTGTGTCG 60056 36 100.0 30 .................................... GTAACACTGGGAGTGGACGAGGACGCAGAC 59990 36 100.0 30 .................................... AAAAACCGGAAGCCCGACATCTTTCAGAGT 59924 36 100.0 30 .................................... CCGGAAGGCAGGAGGTAGAAAGATGACAGT 59858 36 86.1 30 .................TC..........A..A..T TGGAGAGGAGGAGCGAGCCGTCATGGAGCT 59792 36 86.1 30 .................TC..........A..A..T TGCATTAAGAAACTCGTCACTCACTCTGTG 59726 36 86.1 0 .................TC..........A..A..T | ========== ====== ====== ====== ==================================== =============================== ================== 35 36 98.8 30 GTTTGAGAGTAGTGTAACTTCATATGGTAGCTGAAC # Left flank : CCTTAGAAATATTCTCTTCTGAGTTGCGCTATTGCGGAATTGAAGAACTGCTTGCAGAAATAAATCATAGCCTGTTGAAAATGATCTCGGAAACAGAAGTGATGTTTGATTTTGCATTAGAATACTCAGAGTCTATTTCAATAAATGAAGTGCTGAAAAGTGTTGGAGTCAGGTTAAAGGAGCCAGAAGGTACTTTTATTGAACGTTTGACTGAATACGTGCATTGCCTTCATAGGATTGGCGGGAAATCTGAGTTCTTTCTGATAAACTGCAATGCATATTTAAGGGAGGGCGATAACACTTTGCTAGAGGAGTTTGCGAAGCAAGAAAAAGTTGATATTGTACAAATTGAGGGAGCGGTAAGAAGAGCAGGTGGAGAAGAGGATGGAGTTAAAGTTACCATCATTGATGATGATGGCTGTGAGCTATATATATAAAAATTCGTTTGTATACTATATGAAGTTACGGACGTGTGTAGTGACGTTTACTTGAAAATTGAG # Right flank : GAGAGAGCAGTGAAGTAAATCTATTGTATTGCTTTGCTGCACAGATATTCTAAGAGAATCAAACACACCAACCAAAGGAAGATGCTGGTTTTGAAGGAAACTGGCATCTTCTTTCGTTTCATAGGGACTGCCGGAGGGGCTGCCAGGCTGATCCGGCGCCTTTTCTAAGCCTGCCTTCACCCCCTGGAGCGGCTTTCCCCCGGTATTCGCAAGAGCTGCTGGAGAGAGCAATATTTTTTTCAAAAAAGTGTTGACAGACTGACACAATTGCACTATTGTATTAGTAACGTAATACAACAATACAATCATACAACAAAACAACTGCGCAATCGCACTGCCGGACTGTGGCCTGGCAGTTGATGCATAGGAAAAGAGAAAGCGAAAGAGGGAAAAGACAACAGGAAAGGAAGGGTTTTGTATGGCATGGGAGTTTAGAAATGGCATCCCCATCTATACGCAGATCGTGGATGAAATGTCAGCAAGGATAGCGTCGGGCAGGT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAGTAGTGTAACTTCATATGGTAGCTGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //