Array 1 2179858-2182338 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP049887.1 Vagococcus hydrophili strain HDW17B chromosome, complete genome Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 2179858 36 100.0 30 .................................... CTTTATAGGTTTTGCCCCAACCACTTGTAT 2179924 36 100.0 30 .................................... CGGTAGAATTATTAGTGAACAAGGCGCACC 2179990 36 100.0 30 .................................... TGATTTAGAAAGCAAATACAATCAATCAAA 2180056 36 100.0 30 .................................... GATAGATGAGAAGAGGTTCTTTAAAGATGG 2180122 36 100.0 31 .................................... TTTGTATCGCGATGAAAGCCGAGGACTACCT 2180189 36 100.0 30 .................................... TTATGCTGTTTTGTATGATGATCCCTTGTT 2180255 36 100.0 30 .................................... ACGTTCTAAAATATCAGATTTCTACCCATT 2180321 36 100.0 30 .................................... CATTCTTATCTGAATGGTGATGCTCATAGG 2180387 36 100.0 30 .................................... TTTCTGGCGGTCCTAAAGGAGTATCAATCA 2180453 36 100.0 30 .................................... TAATTCTCTGGACATTTATTCACCTCCTTT 2180519 36 100.0 31 .................................... ATGAACGTGCTACTACCCACGCATCTGCTGG 2180586 36 100.0 30 .................................... AGCAGCAAGACGAATTAAGAAGCGAAATAG 2180652 36 100.0 29 .................................... GTCAATTACACAGGGCCAGATGTTAACTC 2180717 36 100.0 30 .................................... ACGACTTCCGTCAATTTCTAACGTTCCCAT 2180783 36 100.0 30 .................................... AGAAAACATCGTCAGACAGCCAATCGTTAC 2180849 36 100.0 30 .................................... TTGGTATGATTATATAGAAAGAGGTTGTTA 2180915 36 100.0 30 .................................... ATCTGACACAGATATTTAATGATAGATTTA 2180981 36 100.0 30 .................................... TAAATACAACTAATTATGCCATTGTTGAGA 2181047 36 100.0 30 .................................... CACTGACACCTAACTCCGTGCCCTCTTCTG 2181113 36 100.0 30 .................................... CGATATCTGGAAAATTTGGCATAGCTCTAT 2181179 36 100.0 30 .................................... AGCCAAGCGCCACACTAAAAGCGGTACGTT 2181245 36 100.0 31 .................................... TCAAAAAAAGGTTCGTCGCTTACTTTTATAT 2181312 36 100.0 30 .................................... CTTCGACTCATGTAGCAGCTATCATACCTA 2181378 36 100.0 30 .................................... AATACTATATTATGAGATCATTGCCTTCAA 2181444 36 100.0 30 .................................... AAATTATCCCTTCAGCAAAAGGCATAAGTG 2181510 36 100.0 30 .................................... AAATTATCCCTTCAGCAAAAGGCATAAGTG 2181576 36 100.0 30 .................................... CGAATTGCATCAAGAGGTATTGAAATACTT 2181642 36 100.0 30 .................................... CGCTAGCCTACATCTGTCAAGTTCAGCACT 2181708 36 100.0 30 .................................... AGATGTATCACTAGAATTAACTTTGTGAGC 2181774 36 100.0 30 .................................... TGTAGCATACATTGCAGCTTGCTTGCGTGA 2181840 36 100.0 30 .................................... AGAAATTGCGGATGCTATCGCAGAGCTACC 2181906 36 100.0 30 .................................... TGTTTGTCTTCATTATAGGGCATGTAAAAT 2181972 36 100.0 30 .................................... CGTCATCTTGGCTGATGATTCAAAAGGTTT 2182038 36 100.0 30 .................................... AAAATGAAGTTAGAGCAGATATTTACAATG 2182104 36 100.0 30 .................................... TATGTTTGCAATTTTATTAGCTCAGAATAT 2182170 36 100.0 30 .................................... CACTGACTCCTAGCTCAGTTCCTTCTTCTG 2182236 36 100.0 31 .................................... GCAAAGAAAAAGATTTCTCAGCGACTGCTAA 2182303 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 38 36 100.0 30 GTTTTTGTACTCTCAATAATTTCTTATCAGTAAAAC # Left flank : TTGAAAGAAACGAAGAAATGATTTGGTTAGCTATTATCAATCCTGAGAGTTTTTTGGAGCTAAATGATTTTGGGTATTTATTTGGAGAATTAAAACGAATCGCAAAAGAAACAAAGCAACTTAAATTTTTTGTTTTTTCTAATCGAAGTTTAGAAGTATCCTATACGTCTGAGGATATTGGGAAAACTATTTTACTTTATGATTATTATGAACAGATGCCAGAATATGGGTTTTTTGAGGAAAGTATTAAACGGCATTATCCAAGTGAATTTGAAATGAGTGAATCAGATTTGGTATCGAGTTTTTATCGAATCGCTGACTTGATAGGAAAAGATCTTAAAGGTGACTGTTATATTAGTGATAAAGATATGGTATTATTAAGAGTAATCAACGACATGTTGGAGGTAAATGTCTCTACTGAGACGTCAGTTCAGACAATTAACCGACTAGAGGAAGCATTTTTAAAAGAGATAAATTAGTTTTTGAAAAAACATTTTGAG # Right flank : CTGTTTGGGCATATAACAATGTAGAGTGGTTGTTTTTGTATTTTCAATATTATGAAAATACAAACTAAACACCTTTCAACGTATCTTCTAACAAAAACTACTCTAACCACCAACAAAGCTCTATAAAAAGGAAGATACCAATGAAAAAGAAAACAGCCATATCACTAATAATCATATTAATCACTACCCTCAGCATTATCTACATCAATCACACGAAAACTAAAAATAAAATCAAGGGGAAAATAATTGAAATTTCAAAAGATTCATTAATCATTGAAGATGATAAAAATGGACATTACATTATAAATAAAGAGGACTATCCATTCTCTGAAACTGAGGTTAAACAAAACGATCAAGTTGTTATAACTTATAAAGGTGAAATCCTTGAAACCTCACCAGCACAATTCAAGAAAATCATAACAATCAAAAAAGACTGATGAGAAAAATCAGTCTTTTTGTATATAATTTAAACTTAAACTTCTTTTTAACCCTCTTTAACC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAATAATTTCTTATCAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //