Array 1 157101-157737 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB896163.1 Salinispora arenicola CNS744 C573DRAFT_scaffold00013.13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 157101 28 100.0 33 ............................ GTACGGAGGCGAGGAGGTCGCAGTGGGCGGCGA 157162 28 100.0 33 ............................ CAACGGCAGCGGCGGCCTGGCGGTACCGCTCCC 157223 28 100.0 33 ............................ GGCCGTCTTCCAGCACCAGGCGAACAACACCTC 157284 28 100.0 33 ............................ CGTGCTCGGCCGGCTTCGGGTCACCAAACCCGA 157345 28 100.0 33 ............................ GTGGAAGATGATGCCTGTGTGGTAGCCGTGCTG 157406 28 100.0 33 ............................ CGATGTCGACGTCGAGATTCTGGACGCGGCCCC 157467 28 100.0 33 ............................ CCCGTCCGGTCGGTGGGAGGTGACCCCCGTTTC 157528 27 96.4 33 .....................-...... CCACGATGCGTGACCGGGTTTGGGCGCGGTTGG 157588 28 100.0 33 ............................ CACCGGCTCCACAGAGCACTTGCGGTTGTCGTG 157649 28 89.3 33 ...........G..A..A.......... GACGAGGAGGCCGGCGTGGACCTTGACGTGGAG 157710 28 92.9 0 ...........G.............A.. | ========== ====== ====== ====== ============================ ================================= ================== 11 28 98.1 33 CTGTTCCCCGCACACGCGGGGGTGATCC # Left flank : GGTCCCCGGATTGGTCGGTATCCCCGAATTCAAGCTGACGAGTAACGGACCCTGGTTGGTGGGGACGAGGGAAGTCGAGCAAGCGCTGGACTGCTACCAGGCGTCGTCACCGAGTCTGCGGGCAGAGCTGGAGAGGGATGACCTGTGGGTGGCCTGGCTTGACTGGCTGAGACTGACTGTCATGCATGGCGGCTTCACCGTCCGCTGACCAGCCCGCCATCCCTAGATCGTCTAGCCAGACATGTCACGCACGTCCAGAGACTGTTCTGTCATGCAGGTCCTGAGACCCGACACCATGCTTCGACTACATGTCTGGCCTCGGGACGTGATTGTCAAGATCAGTGATGGTAGTGGCCTCCGGACGGCAGTCATAGGCCCTTGAGGGCGCTCGTTATGCTGCACTCAGCCTCTGCGCCTTTACAAGTCGTAATACTTTGATCTTGTCGACCGAAGTGAACGAAAACAACATATTTGATCTTTAGGTCTGCAGGTCAGGAAGC # Right flank : CTGTCGCCGGCCTCGCACGCCACAGGATCTTTCCTGCTGACCCTTACGCACGGGAGTGATTCCAGTCCGGCGCCTTCGCCGCCGCCCGCAATACGTGCGCACAACACCTTAGAGGCCGGGCGGGAACGACTGTTCATCAGTCGAGACGGGTCGCCGCTGCGAGGTCACACCCTCTATCAGGCATTCGTGCGGGCCCGTAAAAGGGTCGGAATGGACAACCTGACGTTTCACGACCTTCGCCACACAGGGCAGACCCTGGCCGCGCAGACCGGCGCCACGCTGGCGGACCTCATGAAACGTCTCGGGCGCTCGTCCATGGCGGCGGCTCGCCGGTACCTTCACGCGGTCGACGGCCGCGACCAGGAGATCGCCAAGGCGCTGTCGGAGCCGGCGGCGCATGGAGACGTCGCACGTCTTGCTAAAACGAGCACAATGTAACGAAGGGTGTGGTATGCCGTTAAAAGTGCGGGATGTGATCAAGATGATCGAGGCGGAAAAAT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCACACGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGTTCCCCGCACACGCGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 119878-119553 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB896170.1 Salinispora arenicola CNS744 C573DRAFT_scaffold00020.20, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ================================================== ================== 119877 26 100.0 50 .......................... CGCACCATGGCCGACCTCCAGGACGGAAAGCCGTCGAAGGCCTTCACCGA 119801 26 96.2 48 ..C....................... TTCCGGCTGACGATTCCGACGCCAAATGCTGAATCCCACCTTCACCGA 119727 26 96.2 48 ..C....................... CTCACGCCCTGACTGACGAACAACCTGCGACTCGACGCCTTCACCGAC 119653 26 100.0 49 .......................... TTGAGATGCCGTGGTGGCGTTCGGCCTCGCCGATGATTTCTTCACCGAC 119578 26 96.2 0 .......................C.. | ========== ====== ====== ====== ========================== ================================================== ================== 5 26 97.7 49 CCAACGCGGTCGGTCTCCGTTGCGGC # Left flank : CGGTCGGTCTCCGTTGCGGCACGCACCTCTGCCGCGTGCTGCTCGGCGACGGTCATGTCCTTCACCGA # Right flank : GAGGCGACGAATAGGTCGCGCCGCGTATGCAGGCCTACCACGTCGCGCGCGTCATCGGACAACACCATGCAGCATTGGATGGTGTTTGCTTCGACCCGATCTCCTGGGTATACGCGGTCTCAGCCCTGAGCGGTGAGGGTCAGGGCTTCGGGCAGCGTACGGGTGTGCAACACCGTCAGCCGGGTCACCGCCCGGGTGAGCACGACGTAGAGTCGGTGCAGCCCGCGCGGTTCCGCGTCCACGATGTCGGCCGGTTCGACGACGATGACATGGTCGTACTCCAAGCCCTTGGCCAGCGTCGCCGGGAGCACCGTGACGCGGCTGCTCGTCGCGGCGTCGAGTTCGCGGCTCTTCTCCGGCCGCGGCGAGCGCGGCCCGCACTGCGTCGAGGTGCCGGTGGGGGGCGATGACTCCGACCGACCCGGGAAGCGAGCGCGTCGCGTCCAGTTCCGCGATCACCTCGGCGGCCGGGTCGTCGGCCTGGCGGATGACGAGGCTGC # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:-0.09, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAACGCGGTCGGTCTCCGTTGCGGC # Alternate repeat : CCCACGCGGTCGGTCTCCGTTGCGGC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.90,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 122575-120740 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB896168.1 Salinispora arenicola CNS744 C573DRAFT_scaffold00018.18, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 122574 37 97.3 35 ..........................A.......... GCCGGGCACGGTGCGCTTGATCTCGCCGGTCTTGT 122502 37 97.3 38 ..........................A.......... GACCGGGTCGACCGCAAGAGCGACAAGCGCGCCGGATG 122427 37 100.0 37 ..................................... CGAGGACCTGCCCGCCGATCCGTTCGGCCGCCGTGTA 122353 37 100.0 38 ..................................... TCAGCCGATGGGAGGGCGGTTCCCGCAAACCACGAGGC 122278 37 97.3 39 ..................T.................. GCGGATGGCACCTGCACCTATCTGACTTAGGGCTAGGAC 122202 37 100.0 38 ..................................... ACCCGGGCCTCGGCCTCGGTGCACTCGGCGATCTCCGC 122127 37 100.0 37 ..................................... GGGCACTGGCGGCGGCGGATGCCGCCGCGTACGAGGC 122053 37 100.0 37 ..................................... GCCGCAGCTCATCGATTTCCTTGCCCGCCTGGACCAG 121979 37 100.0 38 ..................................... GAGCTGGCCGGTATCGCCGGGGCGAAGCTCACCGGGGT 121904 37 100.0 37 ..................................... GCCGAGGCCATCGGCTGGCCACTCGACCCGTGGCAGC 121830 37 97.3 34 ..............T...................... GGCCGCCGTACGCAAGGCCGACGACCGACTCCGG 121759 37 100.0 39 ..................................... GGTGAACACGGTCTCGTCCAACGCGGTGGCCGCCTGCCA 121683 37 100.0 39 ..................................... CTCTACCGTCAGATGCATCAACCCATCCTCCAGCAACAT 121607 37 100.0 38 ..................................... TCGCCTAGCCGAGAGCCGCCGCCGAGCTCACATGATCC 121532 37 100.0 39 ..................................... CGCCTGCGGCTGCGGCGGCTGGCTGTCTGCGTTCGACCG 121456 37 100.0 40 ..................................... GCGGGTCAGCGGCGAAGTCAGCCGGCGGCGGCCCCGACCA 121379 37 100.0 40 ..................................... GCCTTCCTAGGCATAAGTCCGGCCGCTCTCAGCAAGGTCC 121302 37 100.0 36 ..................................... CAGCACCACCCAGGACTCCGGGGATCTGACCGCCCT 121229 37 100.0 37 ..................................... CCCGGGTGTTACCTCTTGTCTGCCGAGCGGGCACTCA 121155 37 100.0 39 ..................................... CGTCGAAAACCCGGTGCCCCTCATCATCGGTTACCGGGC 121079 37 100.0 40 ..................................... TCGGTAGCCACATCGTCGGCTGCGGTGACCTCATTCCAAT 121002 37 100.0 38 ..................................... TACCTCACCGCACGCGCGGACGGTGAGGACGGGCTAAC 120927 37 100.0 39 ..................................... TGGTTGAGGTACGCGCGTTTAGCGCGGGTTGCCTGTGCG 120851 37 100.0 38 ..................................... CACTGTCACGGTCGACACGTGACGCGTACCTCCGTCTC 120776 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 25 37 99.6 38 GCCGCAACGGAGACCGACCGCGTTGGGTCGGTGAAGG # Left flank : | # Right flank : GGCTCGGGAGCAGCGCTTATAGCTGGCGGTGGTGGGCAAGGTGGTCCAGCCCTTGTCCGTATTGCCCGCTTGACGTGCCTTTTGGAGTTCGGAACCTCCCGCGTGTCGGGTGTCCACCGGGGGTTCCTAGGTCAACTGAGTGGCAGCCCGAATGGCGTGAATGTGTGCAGTTATCAAGGTTCAAGCTGTAGGCGGAGCTTGGCTGCTCTACGAGTTGGTGAGGGTGACTGGTAGGGGAACGAGGACGCCGGCTGATTTGCGTCCCTCTACTGGCCGACGGTGAGCTGCGGCGACGGCGAAGACTCCGAGGGCGGAGATTTTGCCTTTGGACACTGTGACGTGGCTGCCGTCGCTGTCGAAGGTCAGCTCTGGGTGTTCGATCAGGGCGCTGATGGCGATGAGATCGAGGGGTTGGCGCCATAGCGGCCAGATCATGATGCGTCGTCCGCCGGATTGCGGCGGCCGCCAGAGGGTGGCGGTTGCGGTGTTGCCGTTGCCGG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCGCAACGGAGACCGACCGCGTTGGGTCGGTGAAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-11.50,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [33.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,0.74 Confidence: LOW] # Array family : NA // Array 1 37992-38132 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB896172.1 Salinispora arenicola CNS744 C573DRAFT_scaffold00022.22, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= ====================================== ================== 37992 23 100.0 34 ....................... GGTGACAGGGCCGCGTGTCGAGCGCGGCATGTGG 38049 23 95.7 38 ...............G....... CGGGTGTGACAGGTCCGCGCGCTGCGCGGACGGTTTGA 38110 23 95.7 0 ...............T....... | ========== ====== ====== ====== ======================= ====================================== ================== 3 23 97.1 36 CAGGGCCGCGCGTGGAGCGCGGA # Left flank : GTGGTCGACTCGCGGGAGGCCGACGACGGTCAGTTGATCCGTCGCCGGCGGTCCTGCCCGGAGTGCGGCAAACGGTTCACCACGGTCGAGGAGGCGGTCCTCGCGGTCGTCAAGCGCAGTGGGGTCACCGAGCCCTTCAGCCGGACCAAGATCATTGGTGGGGTGCGCAAGGCGTGCCAGGGCCGACCCGTCGACGACGACTCCATCGCTCTGCTGGCGCAGAAGGTCGAGGAGACCGTGCGGGCCAAGGGGGCCGCCGAGCTTCCCAGCCACGAGGTCGGGCTGGCCATCCTGGGCCCGTTGCGGGACCTCGATGAGGTGGCCTACCTCCGGTTCGCCAGCGTCTACCGGTCGTTCGAGTCGCTCGCCGACTTCGAGCGGGAGATCGAGACGTTGCGGACTGCGGCACAGACCCGAGGGGGAGGCTGAGGCGGCCGGTACGGCCGGTCGTGGCACCTGGGCCGGCGGTCGTACCACCTGGGTTGCGTGGTTCGTGACGG # Right flank : ACGAGGGGTGGATGAGATGCCGGGGGACGGTGTGACAACAAGCAAGTCCAGGAGCAAGGCGGGGGCGGGCCTGAAGGTCGAGCGGGTGTGGACCACCGAAGGGGTCCACCCGTACGACGAGGTGACCTGGGAGCGCCGGGACGTCGTGATGACGAACTGGCGGGACGGCTCGATCAATTTCGAGCAGCGCGGTGTGGAGTTCCCGCAGGACTGGAGCGTCAACGCGGCCAACATCGTGACCACCAAGTACTTCCGGGGTGCGGTGGGAACCCCGGAACGGGAGTGGTCGCTCCGGCAGCTGATCGACCGGGTGGTGGCCACCTATCGCACCGCCGGCGAGGAGTACGGCTACTTCGCCACCCCGGCCGACGCCGAGATCTTCGCCCACGAGTTGACCTGGATGTTGCTGCACCAGGTGTTCAGCTTCAACTCACCGGTCTGGTTCAACGTGGGTACGTCCTCGCCGCAGCAGGTCAGCGCGTGTTTCATTCTCGCCGTCG # Questionable array : NO Score: 2.52 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAGGGCCGCGCGTGGAGCGCGGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,1] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 126745-129192 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB896159.1 Salinispora arenicola CNS744 C573DRAFT_scaffold00009.9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 126745 28 100.0 33 ............................ GGCCGCCGAGCGACCGACCGCCCCGAGGAACTG 126806 28 100.0 33 ............................ CGCGGCGGGTTTCGCGCCGATGACTCGACCGGG 126867 28 100.0 33 ............................ CAGCCGCTGCCCCTGCCCCTGGTTGACGACCGC 126928 28 100.0 33 ............................ CTCAAATCCACAAGTCTGCCGGAACTAGAGCGA 126989 28 100.0 33 ............................ CGACTCCCGCCCCCAGGCGGTGCCCGGTGCCAA 127050 28 100.0 33 ............................ CGTGCCGGACCTGGCCGAGGCGACCCCGGCAGG 127111 28 100.0 33 ............................ CCCCCTCGTCGTAGAGGCCCTTGCCGCGCTGTA 127172 28 100.0 33 ............................ CAGCGCGGCATTCGGGAGACGCCCACGGTCGAG 127233 28 100.0 33 ............................ CCACCCGGACACGTCGCGGTCGAGCAGCAGGTC 127294 28 100.0 34 ............................ CACGCCCTCGGCGTCCGCGCGGACCCAGTCCAGC 127356 28 100.0 33 ............................ TCTCCCGTCGCGACCGGTGCGAATCCGACGCCT 127417 28 100.0 33 ............................ GGTCGCCGACCGGGGCCGGCGCATCGACGGTAA 127478 28 100.0 33 ............................ GCCCGGAAGCGACGCGTGCGCTCATACAGCGGC 127539 28 100.0 33 ............................ CGCCACGTTGTATCGGTCGGATGGCTCGGGGAA 127600 28 100.0 33 ............................ CGCGTTGACGGCGCACCCACCGAGAAGCAGGTC 127661 28 100.0 33 ............................ GTACAGGCGCGTCCGCCTCGCGGTGGATCTGCT 127722 28 100.0 33 ............................ CACCCGCAGCGCATCGCCCGCACCGCCCGTTCA 127783 28 100.0 33 ............................ GTGAAGGTCAAGGGCTCCAACCGGTCCGGCCTG 127844 28 100.0 33 ............................ TCCAGGGCCTTCGCCTCGCTCAGGCAGGTGGAG 127905 28 100.0 33 ............................ GGCGTCCAACGCGCAGCAGCGCAAGGCCGACCA 127966 28 100.0 33 ............................ GAAGTGGAGGCGGAGATGGCCGCGACGCTCTTG 128027 28 100.0 33 ............................ CGCCGCCGGTGCCGGGCGCCCGCCCCGTCGAGG 128088 28 100.0 33 ............................ CGAGGCATCGCTGGCCAGCCGGCTGGCCGAGGT 128149 28 100.0 33 ............................ GTCGCCGTACGCAGCAGCCATGCCTACACCGAC 128210 28 100.0 33 ............................ GAGGTAACCCCGAACCAAGCTGGAGTAAACGCT 128271 28 100.0 33 ............................ CGCCCGTTCCCCGTCGGTGAGCCCGAATGCCTC 128332 28 100.0 33 ............................ CCTGGTGCCGCTTGACCAGCGGCACGGCCTGGG 128393 28 100.0 33 ............................ GGTTGTCCGGCTCCCCGGTTGGCGCACAAGCGA 128454 28 100.0 33 ............................ GAGCGTGACCGTGTTGCACACGGCGTACTCCCG 128515 28 100.0 33 ............................ GGCGAACGTCAAGGGCAGCGAAGCCAGAGCATC 128576 28 100.0 33 ............................ GCAGGCCGAGGTCGACTACGGTGCCGCCCTGGC 128637 28 78.6 10 ....................ATCC..GA GGCTGTCGGA Deletion [128675] 128675 28 100.0 33 ............................ CGGAGACATCGAGTGACGGCACAGTACGCCGTG 128736 28 100.0 33 ............................ CAACACGATCCCGCGCCACATCCGGGTGGCCTT 128797 28 96.4 33 ......................G..... CGCGAGGGGCAGGCCGGTGATCCAGCCCTGAAG G [128814] 128859 28 96.4 33 ...C........................ CACCTTGGCGCAGATCACCGCCTCCTCGGGGTG 128920 28 100.0 33 ............................ ATCAGGCGGACGATCCGGCGGTGCGAGAGCGAG 128981 28 96.4 33 ..........T................. CCGCCCGTCGTTGCGGAGCGTCAGCGCGCATGT 129042 28 96.4 33 ....................A....... TTCGTCTCCACCGAGCCGGGCGGCGATCCCGGC 129103 28 96.4 33 .........................C.. CGGTGTGCTGCCGTTCCCCGAGCCATCCGGCCG 129164 28 100.0 0 ............................ | G [129181] ========== ====== ====== ====== ============================ ================================== ================== 41 28 99.0 32 CTGTTCCCCGCGCAGGCGGGGGTGATCC # Left flank : GAGCGCCGTTTGCAGCACATCCGTCGCCTTGGGCCCGTTGACAAGCAAACTCATCAACGCCCGCGACGAGAGGTGGACGGTCATCGGTTCAGCCCCTTCTGCAGTGCATCCGTACACAGATCATTGTCGTCCAGTGTGGATGGAGTCGTTAAGGCCGACCCGTGGATAGCCGCGACAGCTGCACCTCACCTGCAGTTCGGCCAGCCGCCGCATGATCGACCGTTGCGAGGACCACTCGAATCCGCTCCCCGGAACCCCGGCGGACAGAGGATCAGGTTGAGCTGTCATTGATACAGTGGACTGCCAACTGCCAGCCGTCCGTTGCCAGCGATGTTCTGCCGGCCTCCACAGCTCTGCCAGCCACACGGCTTGGGCCTCACTAACTATGCTGCAGCCGAGAACGCTAGCCTGCCATGTCAACTGCTGCAGGAAGGACGATCTTGCAGGCCCTAGTGAATGAAATCCGGAAGATTGATCTCTAGCGTCGCAGGTGAAGAAGT # Right flank : CCAAAGACGAACGAAGCGATGCCAGCAGTGGACTTCGCCCTTAACTGTGGTTCGGCAGGGCAAGCGCATCTCACCGCGAGTCGACCGCGGTCGACGCCGGCTCAAGCACTTCCGGAGGGCTGTCACTGTGGCAGAGCCGGCACGCCCGGTCCGTCAAGGCTGATCGTCGCTGCTGGATCCACGGCGAGCGCCTGGAAGATCTCGGTGGGTATGAGCACGTCGGCCGCGAAGTGCACTCCTACGGGCGTCTCGCCCGCGAGGACGGCGGTCGCCGCTGCAGTGGCCAGGAATCCGCTGAGTTCGTAGGAGTCCTCGCAGGCCAGCGACAGGACCCGCGGCGGCGTCTCGGCGTCGTTCCCGCCCCAGAGGTGAAACTCCTGGCCATACCACGTGCCGTGGCGCCGTACGTCCTCGGCCGCCGCGTTGACGACCTCGGATGTGTCCGTGTCGTCGAGGGCCCAGGATAGTGCCAGTTGCTCGGGAAGCCGGCCGCCGCCGAA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCGCAGGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGTTCCCCGCGCAGGCGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.90,-11.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //