Array 1 623804-626854 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAFZH010000003.1 Spirosoma terrae strain KCTC 52035 3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 623804 30 100.0 36 .............................. ATAGGCAACTTCACCCGTATAGCTACTGACAATTTT 623870 30 100.0 35 .............................. CGATACCGGCTTAACAATGCGGGTGCGGCAAGGGG 623935 30 100.0 36 .............................. TTGGGAATATCTGCGCAAGTGCAATCGGCGCAAAAA 624001 30 100.0 36 .............................. TGCTTCTATTCTGTCGCCCCTCTGACGTATCAGCGC 624067 30 100.0 36 .............................. TACGTAAAATAGAACGTTTCGTATCCATTTTGAATT 624133 30 100.0 35 .............................. GGGGTACTGAAAGATGGGAAAACCTACCTCATCAA 624198 30 100.0 35 .............................. CGCTTGGTGGTGACACAAGGGATTGTTTTCTTACG 624263 30 100.0 35 .............................. GTCGCAATCTGGTCAATGACCCCATCATGAGCGAT 624328 30 100.0 35 .............................. ATAGATCCATCGCATCTTTTGAACCCGTCACTGCT 624393 30 100.0 36 .............................. CGGTATCGCCATACTCTTTTAGCTCCCTGGTGAGTC 624459 30 100.0 36 .............................. CTCGATGCCAACGGTAAGCCCGAATCCCGTCAGCGC 624525 30 100.0 36 .............................. AACGTCATGTTCGGTACCAGCATAGTCAGGCGTGAA 624591 30 100.0 36 .............................. GTAAATCGTTGAGACGACAACAGCTTTGTTGACCTG 624657 30 100.0 36 .............................. GTTGTAGTAACCGTCTTAGCCGGGTCATCGAGCGAA 624723 30 100.0 36 .............................. AAATTCTTTGGCGGTGAAGCTCGGATACGTTCGGAT 624789 30 100.0 36 .............................. GGTTTCAAAGCATCGCTGTTGATGCTCAAACAAACA 624855 30 100.0 35 .............................. GCGGCCACTACGGCCAGTCGGTTGCCTTTTTCGTC 624920 30 100.0 37 .............................. TTTTTTGCGCGAAGGCTGCTATACTGAGCAGACAAAA 624987 30 100.0 37 .............................. GAGTTGTTAAAGTAACCCGTGTATTCTACGATTCATC 625054 30 100.0 34 .............................. CTATAAACTGCGCCATAGCCTCAGCACCAGCGGT 625118 30 100.0 35 .............................. TAAAACCCAAGGGATTTCCAATTGGCCGGGCAAAA 625183 30 100.0 35 .............................. AACGTAACAGCCTTTAATGCGGACGGTTCGCTGAA 625248 30 100.0 34 .............................. ATCGAAGCGAACCCCTGATCAGATTTCATCCAGT 625312 30 100.0 35 .............................. ACGACGGTGTTGTGCTGATTGAGCCTAAAGCGGAC 625377 30 100.0 36 .............................. TAGCGCTTTATTGATGATGTAACGAACAATCGCGTA 625443 30 100.0 36 .............................. TTACAAGAGCCTCCTTATCGGCCTTGGCGCGTCGTC 625509 30 100.0 36 .............................. ATTGAGATAGCGGCAAACAAGTATGTAGGTTGTCAA 625575 30 100.0 36 .............................. CAGGGCTGGGCGGTTTCTACGCAGCCAAACAATTGT 625641 30 100.0 34 .............................. TAAATAGATTGTCCTCGGCGCCATTTGCTATTAA 625705 30 100.0 35 .............................. TCCATTTTATTCAAACAAGTCGCTATGAACCACGA 625770 30 100.0 36 .............................. GAGGGAGAAACAAACGCTAGAGCCACAAAATCATAT 625836 30 100.0 35 .............................. GATAAGATTACCACAAACGACTTCGCCTTCTTCAT 625901 30 100.0 36 .............................. GGCGGGTGTTAGTGATTGCTTGCATGAACTCTTCAT 625967 30 100.0 36 .............................. TAGTGCAAATGACAGGCAAAAAGAACGGGATGAACA 626033 30 100.0 37 .............................. CCGATCCCCCTCTACAGGAGAAATCAGAGACGGGATT 626100 30 100.0 37 .............................. ATCAGGATTATCAGTACCACCTCTTTCAAGAGAAAAA 626167 30 100.0 36 .............................. TTGTCTAGTACCTTGCCAGGTGCTGGTTTGCCATTA 626233 30 100.0 35 .............................. TTTTAGTGCGATGAGCCCTGGCAATCTGTTGCCTG 626298 30 100.0 35 .............................. TCTTTAAACTCAGGCGTAACCGGATCCTGGTTGAC 626363 30 100.0 36 .............................. GTCTAAAGGCTTATCGTCTTTCTTTTGACGAAAACC 626429 30 100.0 36 .............................. GGGGCTACATCGCAGCAGGTGTTATTGAAGAACTCG 626495 30 100.0 36 .............................. AACTGCTCATTGTAGTCACACAGGGCGATAAAGTGT 626561 30 100.0 36 .............................. TGCTTCAACTCTATAAACGTCTTGTCGACGCAACCT 626627 30 100.0 36 .............................. ATTCTGGCCGGACTGGTTGCCTACACCGCCCAGATG 626693 30 100.0 36 .............................. TAAAAGGCGATTCGAACGCTGCTCATAAATCCTTAT 626759 30 100.0 36 .............................. AATACACTATCCAGGAAGTGGAAGCCAATTTCGAGT 626825 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 47 30 100.0 36 CTTCTAATCGTACCGTAGTGGAATTGAAAT # Left flank : CTCATTCTATCATTGAACTATGTACGTGATTTTGGTTTACGATATTAAGCAGAAGCGGGTCGGGAAGATGCTGAAACTCTGTCGTCGGTATCTGAACTGGATTCAGAACTCGGTTTTCGAGGGCGAACTGACCGACGTGCAGTTAAAGGAGTTGCTCTATGAAGCCAGGCGGATCATGAACGATGAGGAAGACAGCCTGATCCTGTTCAAAAACCGCGATAAAAAGTGGCTGGACAAGCAAATTGTAGGCGTTGAACGCCAATCGACCGATGATTTTTTATGAGCGGTCGCGTCGTCGATCACCCCAAAACGTTCTTTGATGTATTGGTTTTATATGGCCTACAGTTTGTGTAAACGGTATAACGTTCTGATTAATAATGTGTCGTCGATCGCCGGGTATTTTCGTACTATCTGAGGTCGACGATATTTTATACCGGTTATCAGTAATGAGAAAGGCATTTGGGGCTTGCAAAGCCCTTTTTTTATCACCAACTTGACGG # Right flank : TTCGTCAGCATCGGGCGCATTTTCCAACTCTCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCTAATCGTACCGTAGTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [56.7-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA // Array 1 4-2072 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAFZH010000005.1 Spirosoma terrae strain KCTC 52035 5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 4 30 100.0 36 .............................. AAAACTTGACCATTCAAATGCAAAACTTTAACCACG 70 30 100.0 36 .............................. CTTTACGTTCAGCATCATTACGCTCCTTTTCAATTT 136 30 100.0 37 .............................. TTTGATAACTTGCCCAAACAGTTCTATAGGGGTAATA 203 30 100.0 36 .............................. AAATTCATAATACTATAATACATAGCGCCGGAGGAA 269 30 100.0 36 .............................. TTCTAATTAGTGTACCGGTATCGTCTACGACAAACC 335 30 100.0 36 .............................. TCTGGATGCGCTGGAACAGCAGAATCAGGAGTTGCA 401 30 100.0 36 .............................. GATATAGTAAATTTATCGGATGCCGTATAAGCAGAG 467 30 100.0 36 .............................. TTTGTCGAAGGTGAAACCTATACGGTTTTTCATCGG 533 30 100.0 36 .............................. TGATGACTAGACCAGGCGATGGGCTAATCAACTGCC 599 30 100.0 35 .............................. TAGTAACAGGACTGGGGCCTAACAGGAGAATAGGG 664 30 100.0 36 .............................. AGGAATAAACCCGCCCGGAGGGATAGGTAAACTAGT 730 30 100.0 34 .............................. TTGTGACGGATACCGCCGATCCGCCAGGAGGTGT 794 30 100.0 36 .............................. ATGAGTCGGCGCTGGGCATTGTGGTGCGGGTAAACT 860 30 100.0 36 .............................. TCTGAGGGCGGTTCGATCCACGTTTCAGACCCTTCA 926 30 100.0 36 .............................. TTTGGCCTCGACCAGTAGCTCCATTCGGTTGTACCA 992 30 100.0 36 .............................. AATTTTGAAGACAAGTTTTATCTCACGGACGGGCGT 1058 30 100.0 35 .............................. GTCATTAAGGGCTGGGAGCAAATGGGCATGGTGCA 1123 30 100.0 35 .............................. GGCAATACCGGCGCGGGTACGGTCACGCTGGCCCC 1188 30 100.0 36 .............................. CAATTTGATAAGTTTGGTAAACTGCCGATCAGTAGT 1254 30 96.7 35 ..........................G... AAAGGGATTCGGGCCTGAAACAAGCCAAAGTTGTC 1319 30 100.0 36 .............................. GTAACTGAGTCATTGGCAATTACTTGATCATGAATT 1385 30 100.0 35 .............................. AACAATCCTTAATCTACAGTACCAAAAATACAATA 1450 30 100.0 35 .............................. ACGCTAAACAGGCTCGAATTTAGCGAACCAGCACA 1515 30 100.0 35 .............................. ATGATATTGATTCGCTGGTTTCTGATTTTGAGGAA 1580 30 100.0 36 .............................. ACAGGAATCCAAAACTCAGACGCTATAGCAACCTGA 1646 30 100.0 36 .............................. ATATTACCCGGCCCAACATGGACCAGGACCAGGGGG 1712 30 100.0 36 .............................. TCTGCCTGGTGCCATGAAGATTATGGCAGCCGCAAC 1778 30 100.0 35 .............................. GGTTCGCGTCGTAACGAGTAGACCAGATGGTCTGG 1843 30 100.0 36 .............................. ACGGGAAAGCCTACCGGGAAAACCAGGGGCGGCTGA 1909 30 100.0 37 .............................. CAAAGCTGATCACCTCCTGGGCATCGCCTACGTTTTC 1976 30 100.0 37 .............................. CTGATGGCGGCTGGCTTCTGGTCGCGCTACAACCGGG 2043 30 96.7 0 ..........................G... | ========== ====== ====== ====== ============================== ===================================== ================== 32 30 99.8 36 CTTCTAATCGTACCGTAGTGGAATTGAAAT # Left flank : GAAC # Right flank : TTTTAATAGCTACAAGGCTCGTTTTGATCGCATGGCTTTAAGGTGATGTAACGAACTGTCAGCTGCCAATGCCTTATATTCCTTGGACTCAAGCGCATAAATCGCCATTTTCCCTTCAGCATCATAATGAATCCCCCAGCCATATCGCTTCGGTAGAGGGGAGGAGCGTAGACAGGGCTGCCCTTTTGAAAAAAAGGTTTGTCGGGCTTCCTCCCGTTCGCTATCGATCAGTTCATGCTTTTCAGCGTATATGTCGAACAGAACGTCGTCGGATGTGTACACGTATGGATTCTTACGGATAAGCTCAAATTGTAAGCTGGCTACCGAGCGTTTCTCGTCTTTTTGCGGAGGTGCTTCTCCCTGAAGGGCCGGGCTATCGTCGGCTACTTCAATGAATGTGTTGATGTAATTCGTCGTATGGAGTTTCATAGCGGTTGATCGTTAGCAGGACTGTCAAAACCATTTCTGCAACAAAGAAAACCACGACCTGCGACAACCCT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCTAATCGTACCGTAGTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [3.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA // Array 2 108410-111145 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAFZH010000005.1 Spirosoma terrae strain KCTC 52035 5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 108410 29 100.0 35 ............................. GTATGCTTTAGCCAATTAGGCCAGCGTTTACCGTC 108474 29 100.0 36 ............................. TTGCCTAATGTAAATCTACCTAGCTAATTTATATTT 108539 29 100.0 35 ............................. GAAAGATGGGCAGCGGGACTTTATTCTAATAAATT 108603 29 100.0 36 ............................. ATATTCTCGTCGTTCGTAAGAATTCGGCTCACATTC 108668 29 100.0 37 ............................. CTTTGAAATGCGTTTCGTCCGCGCTAGGATGATCAAA 108734 29 100.0 35 ............................. TTGTTATTCAGGTGCTAGCCCCACGATTTGAATCA 108798 29 100.0 37 ............................. GACGTGTCACTCATCTACGGTGGGGACGGACCATCAG 108864 29 100.0 37 ............................. TACTTGATGTTGTTGATGTAGACCGCGACGTAGACAA 108930 29 100.0 38 ............................. TAAAGAATAACCATCCTACTGTTAAGCCGATCGCACTG 108997 29 100.0 37 ............................. GATGGTAATGAGGTAGATAACTGGGCCGCCACAACCG 109063 29 100.0 35 ............................. CTGCTGGAACTCTTCGGGTGATTCGCGCTGAATGA 109127 29 100.0 38 ............................. AAGAGCTCACGAAAGGCACCTACGAAAAAGCACTGGAA 109194 29 100.0 38 ............................. ATGCCCGCGCCAAGATTGAACAGGATTTTGCCCAACGT 109261 29 100.0 37 ............................. AACACACCATCAAATCGTAGACAGACTTTTCGCTTGT 109327 29 100.0 37 ............................. GAATACCTCACTGATTATAAGTACCGCTCTGCTTAAA 109393 29 100.0 38 ............................. GAAAGCGAATCTGTTCCCACGGAATACATTGGACTGAT 109460 29 100.0 36 ............................. ATGCAACGCCCTTTACGATCCAGGTACTGGCTCCTC 109525 29 100.0 39 ............................. GAGCTACCTCAACGCTTACGTCGTTTCTCGAAGGTAGCG 109593 29 100.0 36 ............................. AGAATAAACTGCGCGGTACAGAGACAAAAGATGGAT 109658 29 100.0 38 ............................. TAAGCTGCTCAAGCCGAACTGTGGGCAAGGAAGAGTAC 109725 29 100.0 38 ............................. GCAAAACAACAAAGCCCACGGTCGGAATCAATACGGCA 109792 29 100.0 39 ............................. CGAAGGGCAAATGGTTCATCGCGGAATCGTTTATTAGAA 109860 29 100.0 35 ............................. CAAGCTACTCCTCTGGAGTCTTTTGTACGGAGGAT 109924 29 100.0 36 ............................. TTGTTTCAGAAAATGTTTGCGGCTATGCCACCTCGT 109989 29 100.0 36 ............................. AAAGCAGCCTGTTCAAGCCTCAGCCAGGATACAGAC 110054 29 100.0 38 ............................. GACATCAGTATTGGTGGGTAGCTCCGGTTCGTGCTCAG 110121 29 100.0 37 ............................. GATGGTAATGAGGTAGATAACTGGGCCGCCACAACCG 110187 29 100.0 36 ............................. AAAATAATCTTACGCAAGACGGATACCTAAAACTAA 110252 29 100.0 38 ............................. ATGCGTAAGTAGGCACAGTAAACAACAAAAACAAGAAC 110319 29 100.0 39 ............................. TTATCAAATTGTACTAAGAAATTGCCGTTCTTGCCGCGA 110387 29 100.0 36 ............................. GTTAACAGAACTCGCGACGCAGCTTCGACAAATGGA 110452 29 100.0 38 ............................. GCGATTATCCAGACGGGGGAAGCAGGCATTAAGTTGAT 110519 29 100.0 37 ............................. TTCTCAGTTTCAACTTCTTTCCAGTTGAATTCTTTCT 110585 29 100.0 37 ............................. GGTAAATCCACTCAGCCGGATGACGAAAAAAAGCAGT 110651 29 100.0 39 ............................. GATGGCGCTTACTAGCTCAGATGGCGCGATGTGGTTACG 110719 29 100.0 38 ............................. CAGCACCTGCCCCCATCCCTGAGAAGTCTCTTTGCCAA 110786 29 100.0 35 ............................. TGGCTTGTGAGGTTGACAATGAAGAACGAGCCTTT 110850 29 100.0 38 ............................. AATCCCCATACCGGCGCGTCGAATCCGACTGCAGAAAA 110917 29 100.0 38 ............................. GTTGATGTAATTTCTGATAAGGCATCCGCTTTTCAAGA 110984 29 100.0 35 ............................. TGAGAGACCCTGACTAGCTGGAGTTGATTAAGACT 111048 29 100.0 40 ............................. GCCACCCACGGATAGCTAGAAAACGCCGTCACGCCAGCCG 111117 29 96.6 0 ............................T | ========== ====== ====== ====== ============================= ======================================== ================== 42 29 99.9 37 GTATCAATCGCACCTTCGGGTATTGAAAG # Left flank : TTTATACTAAACCGTTATAACTATGCCGTTTTGTATTGCTGTGTATGATGTAAACCAGAAGCGGGTGAGTAAAATGCTCAAATTATTCCGGCGTTACCTAACCTGGGTACAAAATTCCGTCTTTGAAGGTGACCTAACCGTTGGTCAGCTAAAGCAGTTACAACTGGAAGCGGATGCGCTTTTGCAGGACGATGACGGCGTGGTGTTTTATCAGTTTCGCGACGAACGCTACGTCGAACGCATTGCACTCGGCACCGATGAGGTGAACCGCACTAGGTTCTTATAAGTCGTCAGCCTGTTGAATTGGGCGATCAACTCGAAATTAATACGGCCTGTTCTCGAATGATTAGCTAAATCAAATTATACGGCCTGTAAATGGCCTTTTTGTAAAGTCGTCAGCCTCCTGCATTTTTAGCAGTACTAGAGGCTGACGCTTTTTTGTGTTATTTTTAAGCCTGAAAACCTACTTGAAAGCCCTGTACAGTGCTTTTTTAGGATTG # Right flank : TTCATCGAGAGGCTCGGTGTTAAGTTACAGGTATAAAGTACCAATCGTGCCGGGAATGTTCAATGAAGTGTGTCATTCCTTCAGACTTTTAAGTAGGGCTTGACTCGATCGCCAAACAAAATGGCCAGTTGCTGGACCGTCAGTGACCAATTGGCTAAAGGCATCGTCCAGGTTTCGATAATCCGTTGTGTGCTCAGGTAAAGAAGTTTCACCAGAGCACTTTCCGAGGGAAAAGCTCCCTTCGATTTAGTTACACAGCGGATTTGTCGGTGAAAACCCTCAACCGTATTTGTCGTATAAACTACCTTGCGAATGGCGGCTGGATACTCAAAAAAGCGCGTTAAGCGTAGCCAGTTTCGTTGCCAGCTTTCAACTACCAGCGGATATTTACTCCCCCATTGATGGGAAAAATCAGCCAACTTTTGTTCCGCTGCTGCCAAGTTAGCCGCCTGATAAATCGGCTTCAACTCAGCCGCTACTGCTTTTTGATCTTTGGAGAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATCAATCGCACCTTCGGGTATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.10,-2.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : NA // Array 3 217537-222429 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAFZH010000005.1 Spirosoma terrae strain KCTC 52035 5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 217537 30 100.0 36 .............................. GCTTGACTGGCGACTTGTCTAAGTTCGTCTAACGTT 217603 30 100.0 35 .............................. ACGAACCCGGCGGGGGATGGGATACCGATAGTACC 217668 30 100.0 35 .............................. TTTAATACCTGTCCGATTTCCATTACTGTGCCTGT 217733 30 100.0 35 .............................. GGGGGATTCCCGCGACGGGGCTAAAACTCACCTTT 217798 30 100.0 36 .............................. GTCATGAGTTCGATCAGCGGTGGCACCCGGTTTGCT 217864 30 100.0 36 .............................. AAGACAAGGCCAAGCCTCGCAAACGAACGCTTAAAT 217930 30 100.0 36 .............................. ACAAGAAAGCAATCTTGGCTAAAGCCTACCAACATC 217996 30 100.0 36 .............................. CTTCTTAATAACGAAAACGCGGGACGCGACTACAAT 218062 30 100.0 36 .............................. AAAGGAAGATGCAATTTCGACCTATGAAGACCAACT 218128 30 100.0 36 .............................. GAGCCGGAATAGGTTTGCTGAACGCCCCCCGTACCT 218194 30 100.0 35 .............................. TAGGTAATGTGGATTTTATGCGTAGCTCCAGTAAA 218259 30 100.0 36 .............................. GGGGGCTGGCGGGGGAATGAAGAAACTACTACTGGT 218325 30 100.0 36 .............................. ATTACACCAGGTTGTAAAGTCGGTGCCAATCTCCAG 218391 30 100.0 35 .............................. ATTTGGTAAAATACATCGTCGGCAGCTCCATAAAA 218456 30 100.0 36 .............................. GTTAACGGTGCCAGTAGTAGCTGCGCAAAGGCGGCA 218522 30 100.0 37 .............................. GTAATTCGCCCGTCAATTGTTCAATCGCGCCAACTAT 218589 30 100.0 36 .............................. ATACTCGGCGACATCGCCTATTATAAAACGGGCACG 218655 30 100.0 35 .............................. TTACCAGAAAAAATGGTAACGCTGATTTACAGTTA 218720 30 100.0 36 .............................. GCGTATTCTACGATCCGGCTGTCGTCTCTAGTGGTG 218786 30 100.0 36 .............................. CTGCTAGTGGGATGAGACGATGAAGACAACAATCGA 218852 30 100.0 35 .............................. CGCTTGGTGGGGGCGGCAGGTGTGTTAATCCAGTC 218917 30 100.0 35 .............................. TTCACAAAAGAGCAGATTGAAGCAGCAGACAAGGC 218982 30 100.0 35 .............................. AAGTCATTTGCTGGCATCAAAGACATGACCACGAC 219047 30 100.0 36 .............................. TATTCCATCGTGAAGCGCACAACTGCCCGACGTGGC 219113 30 100.0 35 .............................. GTGGTAGAACCCCCAACAGAGCCGGAACTGTGGCA 219178 30 100.0 35 .............................. ATCAATGGTTTGCTATCAATATAAGTCGGTTTGCT 219243 30 100.0 36 .............................. TCGGATGATGTAATCCATCTAAAGCTTTTCTCTCTT 219309 30 100.0 36 .............................. ATCCTGACTGGCGCTTTCGCGTTCAGCAGTCACTAA 219375 30 100.0 36 .............................. TCCAATTGGAAATCCTTTCGGCTTTGCGGCTTTCTC 219441 30 100.0 35 .............................. TGATTAAGCCGTTTTTCTAAAATAGCATACTTAAG 219506 30 100.0 36 .............................. TTGGCTGATGTCGGTACCTGCCGAAAAGCACGCGTT 219572 30 100.0 36 .............................. ACAATTCAGGTTCCACCACTCGTGGAGGTCGTTGCT 219638 30 100.0 36 .............................. CAGCGAGTTCGGCTACCGATGCCAATACGTATCGAA 219704 30 100.0 35 .............................. CGCTTGGTGGTGACACAAGGGATTGTTTTCTTACG 219769 30 100.0 34 .............................. CAACTCTATCGGGACCTTTCTTTAGCTGAATAAA 219833 30 100.0 34 .............................. ATGCCAGATTATAATGCACGGGTATGCCAGTTGT 219897 30 100.0 35 .............................. GTCAAACTGGCGGGGTACGGATGTTCGAGCGTCTG 219962 30 100.0 37 .............................. TGGTCTTGACTCTTTCAATGTCACCCTTTGCTTTAGC 220029 30 100.0 35 .............................. GCAAAAGAAAAGGTGTATCTGTTTATTGTCTGTAT 220094 30 100.0 36 .............................. TTGGTTGGTCTGGATCAAAATTAAACTGCTTTGGGT 220160 30 100.0 35 .............................. TTGTTTGTGGCGAGCGTAAGCGGTGACATGACCAC 220225 30 100.0 36 .............................. TGAACAGCAACAGGAACTTCTTTTGATGCGGGCACT 220291 30 100.0 36 .............................. ATGGCTCTACGGCAGCCTCCAGTTCTGCTACTTTGG 220357 30 100.0 37 .............................. GGATTAATAGAGCTTGCCGAGTTGAGCGGTACTTTCA 220424 30 100.0 36 .............................. AGGGAAATATAACTCACGGCTGGCACGGAATTTTTT 220490 30 100.0 37 .............................. GTTAAGCCAGTCAACGGGTTGCCGCCCTGAATAACAG 220557 30 100.0 35 .............................. AATCATGTTCTGGCTATTCGCAGTAGGCAAACAAT 220622 30 100.0 35 .............................. CTTCTACACCTTCAGCACCATCTATAGTGAGTTCA 220687 30 100.0 36 .............................. ATGCTTCTGACACCACTAAAGTTTCTCTGGAAACTG 220753 30 100.0 35 .............................. CCTTAAAAGAGCTGGGGCATCAGCTAGTCAATCTC 220818 30 100.0 36 .............................. TACTTTTTCGTAATCCATAAAGGAGAGGATTAGGCC 220884 30 100.0 36 .............................. ACTTGGAGGGAAACTATGTCCGACCCTGGAACGAAC 220950 30 100.0 35 .............................. TAATTCAATTTGCTAATACCACTAGAGGGGATGGG 221015 30 100.0 35 .............................. TGTTCGATTTCTTCGACTATGTAGGCCATTATCGT 221080 30 100.0 35 .............................. TACCCGTTTCAATGGTATTTTTGACATTATCCTTT 221145 30 100.0 36 .............................. GTTGCTATTGATTCAAAAACAGGATTGCCTACAATG 221211 30 100.0 36 .............................. GATATTGTTTTCGTTCGCGAATCGTAGCGTAAACCA 221277 30 100.0 35 .............................. GTTGCTTTGTCGCGGATCTGCTGCTCGAAAATGGT 221342 30 100.0 35 .............................. ATTTTTTGAAGGTGAGTATTGATTTAACCAGTGAG 221407 30 100.0 36 .............................. AAAACTCTTTATGATCCTGTTTCCAACGATTTAGCG 221473 30 100.0 36 .............................. GAATCAACGATGAATCGAATGCGAGTGACTCTTTCT 221539 30 100.0 36 .............................. CAATACGCGTAAGCCGTCCCTTTATGGTGATCATTT 221605 30 100.0 35 .............................. CGAAATCGTCTTCGTTATTGACGATGATGTCCAGC 221670 30 100.0 37 .............................. ATGTGATAAAGTAAGTAGGATAACCGCCTAAATCGGT 221737 30 100.0 37 .............................. CTTGTTGCGTCCTGGGCTGTTTGTTTAAGATCGTTTA 221804 30 100.0 36 .............................. GAGTAGTGAGCATGCTTACGCTTCATAGGGTCTTTG 221870 30 100.0 36 .............................. TAAATAACCGCCAACGGGTCAGGCCCAACGTCCGGC 221936 30 100.0 37 .............................. TACACTGCCCCTATTCGTTTGCCCGGCAATGTTCAGC 222003 30 100.0 36 .............................. ATGAAGGTTTGCTTTATTTGAATCTTTTGCTGTGGG 222069 30 100.0 35 .............................. TTTAAACGCGGTTTACGCATAGACTCCGTTAGATT 222134 30 100.0 38 .............................. GTTGGTCGGCCGGGTGCGCTGTTTTAGACATAAAAAGT 222202 30 100.0 36 .............................. AAAATAGATAACGGTGTATTTAAAAACCTCCTTACC 222268 30 100.0 36 .............................. TCTGGAAGAGCGGTACGCGGAAATGAACCAGGTGGG 222334 30 100.0 36 .............................. AACGTCGGGCGTTGGTTGATTTGGGTAGAAAGAAGA 222400 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 75 30 100.0 36 CTTCTAATCGTACCGTAGTGGAATTGAAAT # Left flank : TCAATAAACCACCCATTCCGCAGGGCGATTTTCCATTGCGTTACACCTATCCAAACTCGGAGCAAAATGCAAATATTAACAACTATGCAGCAGCCGCAGCGGCCATTGGCAGTGATAAGCTAACGACCAAAGTATTCTGGGATACCAAATAAATTGTTGCAGCATAACGAACTGAAAGGTTGCCCGATGGCAGCCTTTCTTTTTGAGTAATAATTCCGCTACGTATGCGACGGGTATATGCTATATTTACTGACCGACCAACGTAGCGTAAACCATGTTGGCGCGTCGATCGGCCAAATTGGCCCGGATTTGTTCTTTGATCACCGGAAAAAATAACCGAAAAAGAGCGGTTTTTCGTTATACTGTTTTGATAATCAGCAAGTCGTCGATCGGCGCTACTTTTCGTATGATTACCGATCGACGACTTTTACGAGAATATATTGTTCAAATAAGTACGTCCAGGGCTTCGCAAAGCCCTATTTTTATCTGTAACTTCACGG # Right flank : TATCTTATAAAATAGGGATATGGTATGAGGTGCGAAAAAAAAACGCCCTTGCTATTAGCAAGGGCGTTCCGGTTTTAATCACAACAACAATTTGCGCCCATGATGACGCGCTTTGCGTTTATTTATAAATCCGATCCTTTACGAGCTTCATGTCATTTAATTCCGGTACAACCTGAACACAATCGCCTGGAATAACGCCCCGTCCAATCCAGTTTACGACAACCTGCTGGGAGAGGTTATATTTTTCGGCATATCGTTTAATCGTTAGCCAGTCGCTCATATCCAATATGGTATCGGGTAGTTTCAGGCCAAGTGACCTGAGATGCGCGATACTAGCGCCTGTTTGCTCATTAATATCCCTGAGCTCTTTATCGAAATCAACTTTTTGAGATACCATGCCTGTATCATTTATGTTTCAATATAAAATATGGTACGACTGAGTAGGGAACCTATTCCCCGTAGTTATTCGTCGTCGGCTTTTAATTCTTTCAGCCATTCGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCTAATCGTACCGTAGTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA //