Array 1 1475189-1474498 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LT963435.1 Staphylococcus simulans isolate Staphylococcus simulans ATCC 27848 chromosome I		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
   1475188	    36	 100.0	    29	....................................	TTGAAAGAAAATATATCAGCAACACAGAT 	
   1475123	    36	 100.0	    30	....................................	ACTTCCTAATTCTTTTATTCGTTTATCATA	
   1475057	    36	 100.0	    30	....................................	GAGGTTTTTAAAAGCAAGTGAGCAAAACGC	
   1474991	    36	 100.0	    30	....................................	TCTAATGATTCCTACACGAGTAATGGAAGT	
   1474925	    36	 100.0	    29	....................................	GTTGAAGCAGTTAGGTACAACATACGACA 	
   1474860	    36	 100.0	    30	....................................	TTCGTATTTAACTCTTCCGTCGCTCCAACG	
   1474794	    36	 100.0	    29	....................................	CTTCCTACGTGATTTACATTCTTGTTTAG 	
   1474729	    36	 100.0	    29	....................................	TTATTTCAATGACAGAGGGTCGATACAAC 	
   1474664	    36	 100.0	    30	....................................	TGAAGCGGAACAATACGCCGAACAGCTAGG	
   1474598	    36	 100.0	    30	....................................	GATAAGTACCACAACAAATCACTAGAGTTA	
   1474532	    35	  88.9	     0	...........G................TT..-...	|                             	
==========	======	======	======	====================================	==============================	==================
        11	    36	  99.0	    30	GTTTTAGAATTATGATCTTTTAGAATGAAGTAGAAC	                              	       

# Left flank :   AATATTGTTTTGAAAAAGTTGCTTGGCATGTTTAAACCAGACTTTCATAATGATTTAAATGATTTAAATGCGATAGAGCAACGCAAATTATTTATAGACACATTAACATCAACAGAAAAAGAAAATGTGCTGGTTTTGTTATTTCCTGAAGCTCATTTAGGGCTTTCGGATATGAAGGCATTTAAAAAATATCTGCAGACTCTAAATATGTTTAGTATTATTGTTACGAGCCATCCTTATTTTATTATCGAGTCAGATACATTAGCGCTTATTAAAATGAATGGAGAACCGGTGAATACTCAACAAATAAGAGAAGAGTTATTGTTGTTTAAAGAAAAAGAATCAATAACTGATTTGGATAAGACAAGCAAAATGATAGCTTATCATGAATTTTGCCAACATCCATATCTTGATGATGAGTTCTTCATTCAATTTATGAACAAATATTAGTTTACTGTCATTATAAAGGTCTCTAAAACCTTGATTTCTCATTGTTTAAG
# Right flank :  AAGCGGGTATAACTTAACTATTTATCGTGCTTGTTTGAATGGAAAAATCTTTATATTTGTTTTGGAAATGTCTTTGACTTTTCATCTATCTGTGTTAAACTTAGTACAGTTTAATAAAGAAATCGTAAGTCTTTAATTGAGAGTACAGAGATGCTCCGAAGGCAGATAATTTACATGTTGAAACTAGAGAAAGTAACTAAGTAAACACTTTATTAAGAGGTAATTTTGTATGAACACGCAATTCACCAACCCTGATTGCCATACAAATTTAGTAAAGTAACCGACAAAACAGTTACTGATTTAAATAGTTGAGATAGTAAATCTCGCATGTTCTTCGTGTCCCGTGTCTCTCAATTGAGATACGGGATTTTTTTATGGAAAGGTGAGTGCGGGAATGACAGAACGTATTGTATTAGATGATGCAGGCATGCAGCGGACTTTAACACGTATCGCACATGAAATTTTAGAGTATAACAAAGGTACTGAAAATCTTGTGTTGC

# Questionable array : NO	 Score: 3.21
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAATTATGATCTTTTAGAATGAAGTAGAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:75.00%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,-0.50] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [4-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,0.41   Confidence: MEDIUM] 

# Array family : NA
//