Array 1 151244-149505 **** Predicted by CRISPRDetect 2.4 *** >NZ_JTMV01000023.1 Pseudomonas aeruginosa strain AZPAE15051 AZPAE15051_contig_23, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 151243 29 100.0 32 ............................. GGATTGCTTCGCCCATCTGCCGGGCCTTGCGA 151182 29 100.0 32 ............................. ACCGGATGCAGTCTTAATCCCTTTTTGCGTCG 151121 29 96.6 33 ............................A GTTATGCTGGTGCTGTCATAGATCATGTCGAAC 151059 29 100.0 32 ............................. CTCTACGACGAGAAGTTTGGCCTGTCGCTACT 150998 29 100.0 32 ............................. TCTATGGGAGGTGGGGAGTGAACGAGACCGTA 150937 29 100.0 32 ............................. TTGAGGGCAAACGACGTTTTGCCCATCGAGGG 150876 29 100.0 32 ............................. TAACGGCCCGCCCCTTCACGCGACCTCCCGCG 150815 29 100.0 32 ............................. CCAAGAAAGAACGCCGAAAGGCCGTTAGGAAA 150754 29 100.0 32 ............................. ACGTTGAGTACGTCGGCGCCGTACTTTTCGTC 150693 29 100.0 32 ............................. CGGGCCTTGGCAGCGAGCAGGGCCTTCATGCC 150632 29 100.0 32 ............................. CGCACTGATGCCAGAGCCGGAGTCGCGACCGG 150571 29 100.0 32 ............................. TCGGCCATCACTGGCAAGGTGCGCGAAGGCGT 150510 29 100.0 32 ............................. GCGCTTCACGGAGACGGCCTGCTGTTCCCTGC 150449 29 100.0 32 ............................. TTCAGCAGGGCGTCAGGGATGGCATCGTGTCC 150388 29 100.0 32 ............................. GCTACTGTCGAAGCCGGCACCACTCTGGACGC 150327 29 100.0 32 ............................. GCCGGATTCCGCTGCCGGGCTACATCATCCCG 150266 29 100.0 33 ............................. CGGGGCATGACTTCAACCCACCCCCAGCCCTCC 150204 29 100.0 32 ............................. TCGCACTTCCAGCCATGGCTGGACAAAGCGGC 150143 29 100.0 32 ............................. GCAGTCAAGGCTGCCGGCGGCCAGTCCGCCCT 150082 29 100.0 32 ............................. GCCAGCAGGGATGCCAGCACGCAGCCAGTCGC 150021 29 100.0 32 ............................. CAGTGACGGCAGCAGACGCGGCGATGCTGGAT 149960 29 100.0 32 ............................. TCGGTAGACGCACAGATGGTCGAGCAACTTCG 149899 29 100.0 32 ............................. GCGCAGGGCAAAGCCAAGGTCACCGCCGGCAC 149838 29 96.6 32 ...........A................. TTCGAGGTCAGCGGCTTCGGCCCCGGCGAGCA 149777 29 96.6 32 ...........A................. CCGGGAATGAACGTTCCCATGTCGGCTACGCC 149716 29 96.6 32 ...........A................. GTCGCCAGGCCCACGTCGGCGGATCACCAACA 149655 29 96.6 32 ...........A................. ATGTAGCTGTTACGCGGTCCCGCGGTGCTGAG 149594 29 96.6 32 ...........A................. GTGATGGAGCGGACCGCCCCGAGCACCGCAGA 149533 29 93.1 0 ........T..A................. | ========== ====== ====== ====== ============================= ================================= ================== 29 29 99.1 32 GTGTTCCCCACGTGCGTGGGGATGAACCG # Left flank : TGACCCGCATCATTCCCACCATCGAAGAGGTACTGGCCGCCGGCGGCGTCGAACCTCCCAGCGCACCGCCCGAGTCGGTGCCGCCAGCCATTCCCAACCCGGAGGGAATCGGCGACCTCGGGCACAGGACGCAAGGGTGAGCTTCCTGGCCGTAGTGGTGGAAAACGTCCCGCCGCGCTTGCGCGGACGTCTGGCAATCTGGCTGCTGGAAGTCCGCGCGGGCGTCTATATCGGCGATGTATCGCGGCGTACCCGGGAAATGATCTGGCAGCAGCTGAGCGAGGGCTACGAGGAGGGCAACGTGGTAATGGCCTGGGCCGCCGCCAACGAATCCGGCTACGAGTTCCAGACCCTGGGCGTTAACCGTCGACATCCAGTGTTGTTCGACGGGCTGCAATTGGTGGCATTCCAGCCTCTGGATCGGACCACGGAATAGAGGATGAGGCGGTAGATTTTTCGAGGTGTTTTTTCTTCTTTAAAAACAATTCTGTACGGTAAGT # Right flank : TGGAAGTACGCTCGCGCAGCGAGGATGCGATATATGCACGGGGCGAGCCGTTCACTTGAAAAGCCGACATTCCTGGCTGTCCTGTATTTCCCCTTTGGCATGGATAGAGCAGCCCCATAGGGCGAACGACGCCACCGGCGTCATTCGCCATGGCCGGGTCAACCGGAACGTCGAGCGGCTACCAGGCGCTGCTGCAGGCGCGTCAGGAAGGCCACTTCGAAGGCGGTCTTCTGCATCGGTGTGGGCAGGCTGTCGCGGCCGAAGGCGAAGGCGGTCCAGAGCTGGCCTTCGATCTGGTCGGCAAGCCAGTTCTCGGCCTGGCGGACGCCCTTGTCGATGGCGGGCTGGGCGGGAACCGGCCAGAGCAGGGATAGACCGGGTTGCCGGTCGGCGGGGGGAATCTCGACCATCAGGTCCTTGTAGCGTTCGATGATTGCGTCGACGTGGGTCTTTTCCTTTTCATCCTTCGTCATGCTGGGTACTCCGTTTCTGAGAGTCAC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGTGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGTGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 161543-160416 **** Predicted by CRISPRDetect 2.4 *** >NZ_JTMV01000023.1 Pseudomonas aeruginosa strain AZPAE15051 AZPAE15051_contig_23, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 161542 29 96.6 32 ............................A GCAGGATTTGGAGTCGGAGCGTTTACCTACAT 161481 29 100.0 32 ............................. GTGAACGATGCGAATCGGGCGGGGGTTTGGTC 161420 29 100.0 32 ............................. GCTTGGTAGATGCCTGGAACAAGTCGGTCAGC 161359 29 100.0 32 ............................. CGCGCTGTCCTCGGCCTGGACTGGACCATCGA 161298 29 100.0 32 ............................. TGGGCGAACGACGGCAGCGTCACCCAGGCGCA 161237 29 100.0 32 ............................. ACAGGGACGTTCTCCGCGAGCTGGCCATCGAC 161176 29 100.0 32 ............................. GCAGAGCGGATTGCTGCCCGCTTTGTCGGCAC 161115 29 100.0 32 ............................. GGGGTGGTAGCACCGGACTCGCGGATCTTGAA 161054 29 100.0 32 ............................. GCGTACATGACTGAGGGAGAGTCCACGGACCT 160993 29 100.0 32 ............................. TCATATAGCTTGTATTTTTCCTTGCTATGAGA 160932 29 100.0 32 ............................. AAAAACGACGGCATTCACTACGCGCGCCAGGC 160871 29 100.0 32 ............................. GCGTTCATTTCCCAGGACGTGGACCAGCTGCG 160810 29 100.0 32 ............................. GCCCCAAAAAGCGTTGGCGTCATCGGCTGGCT 160749 29 100.0 32 ............................. TTCATGAACGGCAGAACGTTGAGCGCCGATTT 160688 29 100.0 32 ............................. GTTGTTCTAGAGTCCGTTCAGGAGATGCTTCT 160627 29 100.0 32 ............................. AGGTATTCCTTGCCCTTGGCCAGGAGCACGCC 160566 29 100.0 32 ............................. TCATCGATCGTGGCGGCTGCACTGGCTGCCTG 160505 29 89.7 32 ..............C..........G.T. GTATCGACATCGATGGTGACCAGGCTGGTCCG 160444 28 79.3 0 A..........A..C.....-..A....T | C [160435] ========== ====== ====== ====== ============================= ================================ ================== 19 29 98.2 32 GTGTTCCCCACGGGTGTGGGGATGAACCG # Left flank : GGCATCGTTGTACAGGGCGACGAATTCCGCGCCCCAGAACAGCACGATCTGCGCCTTGGCCGGCAGCAGCGTGGCCATCGTCGTCTTCAGGCTCGCCGACCAGGCGTCCGGCGGGCCGAGGGGCGAACCGGCCGCGTCGAGGCTGAGCAACAGTTTCCCGACCGCTCCTCCGTTGGCCAGGAAGGCCGGTGGATGGTCGAGGGTGTTCGGGTCCGGTTCGATGGTGAAAGGCTGTGCCATGTCTGCGGAGTCTTGCTCGGTTCCGGTTGAGGTGGTGGGTTGCATGGAATATAGGAGGGCGGTGGGTGCGCTTGCGTTCAATCAGCTTGGGGGACCGCGGGATCCCGATGCGGGTAGGTTTCGAATGGTCCCGAGGGAGCTGCCGGATTAGGCTGTGGGATGAGTACGGCCCTCATTTCCAGGAGCGGCGCGAGGGCCGCTTGGCCCGGTGGAATTTTGCTGTTGTTTTTCTTTTTTTAAAACAATGGGATACGGTAAGG # Right flank : GTCTACGCTCCTGCGGTTCGCCCCACCGCGCGGTATTTCCCATGGTGGGGCGAACCGCGCGGCACTACGACCAGTGGCGTAATCACCAGTGTCAGCCGCCAGTTGCCGGAGACGCGGATCGCCCACCGTCCGGCAAGATCCTCTTTCAGGGCATGGAGTTTCCAACCAACCTGGTTCACGTCGCTGGGGATGCAGGCTTCGCTCAGCACGAATAACTGACGGCGCAGGCATTGGGCGGGGGCTGCCTGGATACCTTGCCCTTACCGGTCTCGAAGAAGGCTTCCAGCCCCCTGTGGCGGAAGGAAATAGATTGTGAACAGGCGGCAAGTGAAGGTTGTTAGTGAGTTAGCGGAATGTCCGACGTTCGCTGTTGCACCATGGAGTTCCTGCTAATTTGGACAGGGGTGGTCGGTCCGGTCCATATCCCTCCTGCGCTCCTTCGCTTGCTAAACGGGGGGAGCAGGCGCATCCCTCGCTGGCTGCTCCTTGACGAGCGTCAT # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGGGTGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGGGTGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //