Array 1 187117-184029 **** Predicted by CRISPRDetect 2.4 *** >NZ_QULW01000003.1 Clostridium sp. OM02-18AC OM02-18AC.Scaf3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 187116 31 100.0 35 ............................... TCGCCCCTATTTATCCCCATTAAATAGTAAATGCA 187050 31 100.0 35 ............................... ATAATTATCTCCCGTCCGCCAGACGGATACAGGAA 186984 31 100.0 33 ............................... CAAAAATCATGGATACTGGTTTACGGCCGCATA 186920 31 100.0 36 ............................... CGCTTATGGATAAAGCAACTGGGTCGATTGCATCAA 186853 31 100.0 33 ............................... ATAAGCCAATACTGTTTTGATGTTATCATTTTT 186789 31 100.0 35 ............................... CGCGAATCAATATGCGAATGGTGGAGAACACATGT 186723 31 100.0 36 ............................... AAGAAAATCTTAATTTAATATATCATCCAGATTTTT 186656 31 100.0 35 ............................... CGCACCACATTAAACACTCCCTACTACGGTAACAT 186590 31 100.0 34 ............................... ACACCTCAAAAATAAGTTTGAAAAATTAGCTAAA 186525 31 100.0 35 ............................... CCGTCTATGCAGTCAGATTCAAGTGCGCATATCTC 186459 31 100.0 35 ............................... GGTTCCAGACCGTATGAGTTATCGCGGGTAATACG 186393 31 100.0 33 ............................... CATCTATCTTGGTATCTTTATCATTGGTGCCGC 186329 31 100.0 35 ............................... TATGTGTATGGCTCGCCGTGATTATTCGCGAAAGT 186263 31 100.0 34 ............................... GCGAAAGTGGAGATTTTAACGAATAGTTAGAAAG 186198 31 100.0 36 ............................... CTTTTGCTGCATTCATCATGTCACCTGCAGCTACGA 186131 31 100.0 33 ............................... ACTAATGCCTGATACATTTCAGCACCGCTTTAT 186067 31 100.0 33 ............................... CCTGTCCGGCTGTAAAACTGCCCCTGCCACCAC 186003 31 100.0 32 ............................... TTCCAGTACCCAGTACACTGAAAGTCAGTTAC 185940 31 100.0 33 ............................... TGTGCTCTGGAGAACCAAGTATTAATGTGCCTG 185876 31 100.0 34 ............................... ATACAGATGAGGATGATGTAAATGGAGTCTTATA 185811 31 100.0 34 ............................... AGACGATTAGTAAACAGTTGGAAGCCCTCTGGAA 185746 31 100.0 33 ............................... CTCTTTGATCCGAACCTCTCTTGCTACTTTAAT 185682 31 100.0 33 ............................... AAAAACACGGTTCCGTATGCGCATCCGTACTCC 185618 31 100.0 34 ............................... GGTAAAAAGGGGTCTGGCAAGACCACCCTTTTAA 185553 31 100.0 34 ............................... AGACGATTAGTAAACAGTTGGAAGCCCTCTGGAA 185488 31 100.0 34 ............................... CCGGGCAAATAACTCCACTATCCGTAATTCGCGT 185423 31 100.0 33 ............................... TGTGTTGATCTGGTCAATCCTGATCTCTGCGAT 185359 31 100.0 34 ............................... CTGATGAATCAACAGTGAATTGACCATTACCAAC 185294 31 100.0 36 ............................... AATGATTGGTTGGTACTCTTCTTCTCGGATGTATAC 185227 31 100.0 34 ............................... TCATAAACCTCGGCAACTGTTCATCTGGTATAAC 185162 31 100.0 35 ............................... ACACCACCAGTAATCACACCGAACCCTGAATTTGC 185096 31 100.0 33 ............................... TCCTTGATACGATAACATTAAATAAACGCCGTA 185032 31 100.0 34 ............................... AGTGCCTCAGAAATTCGTGGTCTCACCAAATCCA 184967 31 100.0 34 ............................... AGAAGCAGAACAAGGCGTACAATGAGTATTGCAA 184902 31 100.0 33 ............................... ATTAGTGATATCAGTATATGATTATTTATTTTA 184838 31 100.0 36 ............................... TGGATGCAGAGGGAAGATGGCGGAAGGAGAGATTTA 184771 31 100.0 34 ............................... ATGATAGCTTCGATTATTCGGTTTAGGATATAGC 184706 31 100.0 33 ............................... ATTCAGGGTGCTATTGAAGCAATGGCAACCCTT 184642 31 100.0 34 ............................... TTATGAGAAGAAGTCACAGGCTACATTATCCCCT 184577 31 100.0 34 ............................... CGGTGTAGCGTTCTGTTTGGATGCTTCCGGGTTC 184512 31 100.0 34 ............................... TTGAATACCCCCGCAACAATCAATCCTGAAATGT 184447 31 100.0 35 ............................... CTTACTGCCCAGAATGTAAAATGCAGTTTGATCCG 184381 31 100.0 34 ............................... CGTCAAAGTAGTTACCCTCACGCACCATGCCTTT 184316 31 100.0 33 ............................... ACACAGATGGACGATGTTGACAAGTCCTATATT 184252 31 100.0 33 ............................... TGTCAGCTCCTGCTGTTCTGGGATATCTGTGTC 184188 31 100.0 34 ............................... TGGCATGTACAGGTGCGGTTTGTCTACGATGCTT 184123 31 100.0 34 ............................... CATTGCGCATATAAGGTAACTGTACCGTTATTAT 184058 30 74.2 0 .............T....TA.A.-..C..CA | ========== ====== ====== ====== =============================== ==================================== ================== 48 31 99.5 34 GTCGCTCCTTCGCGGGAGCGTGGATTGAAAT # Left flank : TTTCCTTTGGAAGTGAGGTGGCAGAAGATGCTTGTATTGATTACTTATGATGTAAATACAGAAACAGCAGCAGGAAGAGCCCGCTTGCGAAAAGTTGCCAAGCAATGTGTGAACTACGGGCGAAGAGTGCAAAATTCTGTGTTCGAATGCATTCTCGATAACGCCCAATGCATTATGCTAAAATCCATTCTGACAGATATCATAGATGCTGAGGTGGACAGCCTGAGATTTTATTATTTGGGAAATAAATACCAGACGAAAATCGAGCATGTAGGCGTAGACCGCGGCACAGCTGCTGATCAGGTATTGATTATGTAGTACGTGTTCGGTGCGAGTCGAAAGTGTACATAAAAATGACAGGAGACTCGCACCCGAAAAAAGTAACAAAACGTGTTAAATGAGCATTTATCGAAATCAATTTGAAACATCCTAAAAATATGATTTGTGCGAAATGTGAGAGAAGATTGTATGTTGGAGAAAGAAAATTAGTGATAAATGCA # Right flank : GACTTAAAAAACATAAGTTTTAAACAAAAGAAAAACTTCGGACGCGCGCAAAAAGAAATACAACTCAATGTAAAATTAAAAAAATAAAGATTTTAGTTGCATTTTCAGAAAATGTGGCGTATACTGTCTGCAATGGGAAGGCAACGGCGCTTTTAAAGCAAGATTTGTCTGCCCTTTTTTTGTATCATAAGAACTTTTGAAGTTATCTTATGAAACAATTTATCGCATACAGAAAAAATTTGGGAATGTGTTTTCTGTATGGATTGTAACTGCTCGGCTTCCGATCGGTTGGTTGCATAAATTTTTATTAGACAGGAGGACTTCATATGAGTGAAAAGAAAAAAGGCGGCGGCGCGCTCTTGGGAGCAGCATTTTTGATGGCAACATCTGCAATTGGACCAGGTTTCCTTACTCAGACATCCACATTTACGGGTCAGTATCAGGGCAGTTTTGGCTTTGTCATTCTGGTATCGATCATCCTCGCGGCAATCGCACAGATT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTTCGCGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.90,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : NA // Array 2 198854-195390 **** Predicted by CRISPRDetect 2.4 *** >NZ_QULW01000003.1 Clostridium sp. OM02-18AC OM02-18AC.Scaf3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 198853 33 100.0 34 ................................. AAGCAGATGCACAGATCTATCCCGAACGGAATTG 198786 33 100.0 33 ................................. TTGCATCTGCGAATCCGGTTGTAAGAGCAATCG 198720 33 97.0 33 G................................ CTTATACGGTTTCAGCATCGTTATCGTCCTCCT 198654 33 100.0 33 ................................. GGATTTTTGTTTACAGGAGCGGAGGTAGTATGG 198588 33 97.0 32 C................................ GCCCTCATGGTGTTTTAGTTCTCGGCATTTTG 198523 33 97.0 33 C................................ CGGTTACTGTATCGTTTACCCTTATCTTTGTAA 198457 33 97.0 32 C................................ TGTGGTATTTACAATCTTGTACTCGCCCCTGC 198392 33 97.0 32 G................................ ATTGATATAACACCCCGCTTTTTGCCCGTATT 198327 33 100.0 34 ................................. CATATCAGTGCCGCAAGTATGCCGAGAATGTATT 198260 33 100.0 34 ................................. CGGCGTGACCGTGGCCGGGGAAAAAACCAATGAA 198193 33 97.0 33 C................................ CAGTCTATGCCGTCCACGAATAAAAGCAAGGTG 198127 33 100.0 35 ................................. CACGCCTGTAGCCGTCTGGATGCCGGAGGACTCAT 198059 33 100.0 32 ................................. TGCTGATGTGTCAAATAGGTATGGTGCATATC 197994 33 97.0 33 A................................ TTCCAACACTGAATATGATGCTGACAGTGATAT 197928 33 100.0 33 ................................. TGATATTTTCAGCAACACCTCCCGCATCTCTGC 197862 33 97.0 32 C................................ ATGACAGCGCCGTCCAGATAGTATTGTGCCTG 197797 33 97.0 35 C................................ ATTACTGCATCGGTTTTCCATCCGCCACGCTCCTG 197729 33 97.0 32 C................................ AATGATGCAATAGCAAATTCAGGCGTGGGTGA 197664 33 97.0 33 C................................ AATGGTTGTCATTAACCTTGACCTTGGTGATAT 197598 33 97.0 33 G................................ AATTTGATGCCCTTGCCATATATCGGTGCATCA 197532 33 97.0 32 G................................ CATACTTTGCACACATTCCTGTATCTTCATAA 197467 33 97.0 34 G................................ AGTTTGGAAATACTTGCTATATCAATAAAGATGA 197400 33 97.0 33 A................................ TAGCAAGCGGGCGAACCGCTCTAATTCCATATT 197334 33 100.0 34 ................................. TCCCATAGATCTGTTTGTTATCCGGATCCAGTGA 197267 33 97.0 32 A................................ TCCTCCAGGAAATGGCGGATCGAACGGGTCTG 197202 33 97.0 33 A................................ ATGCACTGCCCGTATGATTCCCGCATGAGCCGA 197136 33 97.0 34 A................................ TATCTGGTCGTACAGATAGCCCACCAGTATATTT 197069 33 100.0 32 ................................. TTCCAGGTATCCTCCGCTCCAACATCATCTTC 197004 33 100.0 33 ................................. CTGAAAGCCGGTCACGAAAAAGGATTGTGGCAT 196938 33 100.0 33 ................................. CAGCGTGATCTCCACGCTGATTTTTGCAAGCTC 196872 33 97.0 34 G................................ CGCAAGGAAATACTACCCGTACCTTGACTGGCTC 196805 33 97.0 32 A................................ TTCTCAGCCTCCGGCATGATTGCCAAGCTCGC 196740 33 97.0 32 C................................ CAGGGTGATCGAAGCCATGCGTCGTATGGAAA 196675 33 97.0 33 G................................ CTCCATAATGTGGTTATAAACCTCGATTACCAT 196609 33 97.0 32 C................................ CCGCACTTGCTTCGGCACACGTTCGCGACACA 196544 33 100.0 31 ................................. CGGAAGCGGACGAATGACACCATAGAATACA 196480 33 97.0 34 C................................ AAAAGCATACCAAAAAGAGTTCAGATGTGGCCGC 196413 33 100.0 33 ................................. GGTTTCCTGCTGCTGCCAATAGCAAGCACGGCA 196347 33 97.0 34 A................................ TAATCCCCGTTATCCATAAGAACTCCGCAGATAC 196280 33 97.0 34 C................................ TTAACGGTATCTCTGGAAAGGTTCACGCCCTTGT 196213 33 97.0 33 C................................ ATGATTCAAGATTTTAGATTTCGAAGCAGAGCG 196147 33 97.0 33 G................................ GACTGCAAGATCGTGATTGAAAAAGCGTGTGTT 196081 33 97.0 33 G................................ TTTTCAGAGGAAGTCAGCTGGCGAAGCCCTCTT 196015 33 97.0 32 G................................ TGGGAAGTCCTTTGCGTAGAACGTCGCCCAGT 195950 33 100.0 32 ................................. TACTTTAAAACTTCCTGATGGGTTAATAGCAA 195885 33 97.0 33 C................................ CGTCTGAGTGACAAGTCCATTCCGGTTCCGTTT 195819 33 100.0 35 ................................. CAGTATCGTATCAGCTGCGCTTCTGGGAGAGTCAT 195751 33 100.0 32 ................................. TATAATTACACACTCACTGTAGACCCGGATAA 195686 33 97.0 32 A................................ ATTCTGTACACCCGGTTCATCACCTTTACCTG 195621 33 97.0 34 C................................ CTCTGCTGCCCTCTGTGGGTCCGGCGCGGTCTTT 195554 33 97.0 33 A................................ CTCCGTACAACTCAACAGGTGCGGGGTACACAA 195488 33 97.0 33 A................................ GCAATATTCCGAACGATGTTTTCCAGGGCATTC 195422 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= =================================== ================== 53 33 98.0 33 TGTCGCTTCCCTCGCGGAAGCGTGGATTGAAAT # Left flank : TTTTAAACGGTTTTCCACAGAGCGTGTCATGAAATCATTGGCAGGTGAGTTGACTGAAAATGAAAAGTGGTCTATAAAAGGAACTCTGATGGGAGAGTGTTGGTATAAGAACTGCTGCGTATCAGATCATAAAGACCACTTTAGATGCGGGAAACCGGAACTTGAATCTGGAAACAAAAAAGTGACAGCATTAATTCTGTCAGAAGTTGTACAGCAGATTTTGAAAACGATATGATTTCGGAGTGGAGTATTGATTAATGATTACTTCATAATAAAATAAGTTTTCATTATCAAATCTTAGGCAATTGTGGAAAGCATGTATGCATGTCATTGAATATGAGGTGCGAGTCGCAAGTACACATAAAAATACGTGTGGATTCGCACGTCTTCCAATAAGAATATTTTATTTGCTTGACGATATGAAAAAGAAATATTATTATTAGTTTGTAAGTCGTGCTATGATTTTTGCAGATATGCACGAGAAAATTGTACACATTTGC # Right flank : AAGCTAGAATACCGGAGCTGTCATAAGTATGAGGCTCGCTTTCCTCACGTAAGCACAAATTCCAGAAATATCCAGTATCTTAAATACCTGGCATTTTTATAGTACACCTATACAATTATAATGTAACACAACAAGAACATTATATGAGGAGGGTGTATATGGCAGAATTATATTTTACAATTTCTGGCTGTAAACATTATTACGGTACGGATTTTATGGAGAAGGGCATGAAAGTCCAACTCGTAAAAGAACCGGACAATGAATTTGACAAAGAAGCCATTCAGGTGATGGTAAAAGGTCTCGGAAAATGTGGTTATGTGGCGAATAGTCCTTATACCGTAAAGGGGGAATCCATGAGTGCCGGAAGATTGTATGATAAGATTGGAGATACGGCAAAGGGAAAGATTTTATTTGTTTTGGATCAGGGTGTGTTATGTAAGATCACAGATACAGGAATAAAAAGTGAAGAATAGAGAAGGTGTTTGTTTCGTTGCGCATTG # Questionable array : NO Score: 8.60 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.44, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGTCGCTTCCCTCGCGGAAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CGTCGCCTCCCTCGCGGAGGCGTGGATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.50,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 217888-215107 **** Predicted by CRISPRDetect 2.4 *** >NZ_QULW01000003.1 Clostridium sp. OM02-18AC OM02-18AC.Scaf3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 217887 33 100.0 33 ................................. TTTGTGATCTGCATCGGCGTCATATCAACAATG 217821 33 100.0 35 ................................. GTGTTGCATAGTATTTAAAAATATACCATTTTTGA 217753 33 100.0 34 ................................. CGTATATGCCGATGGTAACTGGCAGCTTTATCAA 217686 33 100.0 33 ................................. TTCTGTATCGGGAATTACAGCATAGCTCAAATG 217620 33 100.0 33 ................................. TATGTCATTGGTGTACTGCACCGTAACAGGCAG 217554 33 100.0 36 ................................. CCTGTCCTATATGACATATTATTATGTCCAGGGCAA 217485 33 100.0 33 ................................. TTCAGTGTATTCGGTCGGTGGAACGAAAAATAT 217419 33 100.0 34 ................................. AGAACGGTTTTGACCCCGGTGATTTTGCAACATC 217352 33 100.0 36 ................................. ATGCTGTCGGAACGATTGAAGTCACCGTACACAATG 217283 33 100.0 34 ................................. TTTGCATGGATGGTAACAACGGTGGTTTTATTGG 217216 33 100.0 35 ................................. GCTTGATGTTGGCATCAATCTGGGGCTGTGCCATC 217148 33 100.0 33 ................................. AGGTATTTGACCACTTTGAGCCGATCATAAATC 217082 33 100.0 33 ................................. ATAGTGCCTAGTGAAAGGGGGCGGTTGTTATGA 217016 33 100.0 36 ................................. GAACTCCAGACCGATGTTACCGGACGGTTTTACACC 216947 33 100.0 34 ................................. CTGAATGTCCCTTGTCATATCAATACCGCTTGGG 216880 33 100.0 34 ................................. ACAGTGCTTAGAAAGGGGGAAATAGTATGTCTGG 216813 33 100.0 34 ................................. CTGCCATTTATAATATACCTCCACTGTTTCTTCT 216746 33 100.0 35 ................................. TACAAGGTCACGGGCGGCACGACATATCACATTTA 216678 33 100.0 35 ................................. CTTTGACTGTCTTTATTATATACTTACGGAAGTAT 216610 33 100.0 35 ................................. TTTGCACCGCCGCCGTTGTTGCCTGCTCCTGCTGT 216542 33 100.0 33 ................................. TTACGTCAGCAGCAGTGTGTCCTTGCGTTCCGC 216476 33 100.0 33 ................................. CCTTGAACAACGTACAAGAGGGCGTGTTATACC 216410 33 100.0 33 ................................. CACCCTCTGCCAGCTAATATCTGCATAGGCATA 216344 33 100.0 34 ................................. ATCACGTATGGTTTTTATTGTTCCGTCTTCGTCA 216277 33 100.0 33 ................................. ATTCCAGCAAACTCGTCAAGCTCCTCAAACCAA 216211 33 100.0 34 ................................. AAGTACAGCAAACGCAAGGTAGAGCAGCTGGCGA 216144 33 100.0 33 ................................. AATTATAAAGGTCTGGCAGGTTTGCAACTACTG 216078 33 100.0 34 ................................. ACCTGAAAGGTCAATCTGTAACTTAGCAACTTCA 216011 33 100.0 34 ................................. CTTCATAAACTTGCAGATTTTGCGTGATTCAACC 215944 33 100.0 34 ................................. TATGACCGTATCGGATCCATACTCTTTGATTCTT 215877 33 100.0 34 ................................. CACCCTCTCCATACCCTCTGTCGATAAGATCCGT 215810 33 100.0 34 ................................. CCGGGACGTCGCCCAGTTCCGCAAGTTCTGCGTT 215743 33 100.0 33 ................................. ATAACTCTTGCATTGTTCTCTGCTGTGCTTATC 215677 33 100.0 34 ................................. AATGGTAGTAATCAACCTTGACCTTGGAGATATA 215610 33 100.0 34 ................................. TGTGAGGAGCAGTACGATGACACATACAAAGCAT 215543 33 100.0 33 ................................. GGGTTAGGAACCTGATATGCCGGAATCGGTGCC 215477 33 100.0 36 ................................. TGCAAGCAATCGTAGACGGTCGAGGCGGGGCAGCAG 215408 33 100.0 35 ................................. CCATTGTGTTCCGCTTCAGAAATGGGGCGTTTAAA 215340 33 100.0 35 ................................. AATGTCACGTCTGCTGTTGCAGCCCAGCAGTTGCC 215272 33 100.0 34 ................................. ACTCTGGATGCCTCGACCGCAAGCATTGGTAAGG 215205 33 90.9 33 ...A...C..G...................... TAAGCGCCATACTACCTCCGCTCCTGTAAACAA 215139 33 87.9 0 ....T.....G.......C............G. | ========== ====== ====== ====== ================================= ==================================== ================== 42 33 99.5 34 GTCGCTTTCTACGAGGAAGCTGTGGATTGAAAT # Left flank : TAGTTGCCTGCGAACGATACAATCGCTCATGACGCAGGAAGCAGCCATGCAGTTTCAAAATGTCGCAAAGGAGTTTAAAGTGATTGATTCTGATACGGTTACAGCAGTTGTTGATGAATCCTTTGCAAAAGAAATTGCACACGGCAAAGGCGATTGGAAGGTATTGCAGAAAAAGTCCATTTCAATTCCCCGGAATAAAATCAAGCAATGGAATGTAAAAGAAATTGCAGATGATATTTTTCAATGGACTTTGGCGTATGATGAATTTTGGGGATATATGCGTGGCGTTTTGGAACAGTACAAGTAGAAGTTTCTGAAATATTTGACACGAATAGGTATTGGGTGCGAGTCAGAAGTGCACATAAAATGTTGGCAGATTCGCACCAGTAAAATTGTATATTTTTATAGGGTTGACAGCAATAGAAGAGGATAATGGTATTATTTTGTGAGTATTGCTGTGATTTATGCAGGCGTGCAAGGAATGGTTGTGCATGTTTGCT # Right flank : GAGAAAGTTCTGACCAAGAAGATGTTCATCAATATGCAAAGGAATTGATTGCCCTAGAAGGAATAGATGCGTATAATTTAAGTAAAATTAGTGGATATCCACACAAGATATGTACATGGAAAAGCTGTTCAAAGTTGAAGCTGAATACAATGCATGGTTCCAAATCGAAAAGGAAAAAGCATTATGGTAATTATCGAATGTCTAGAAAAAATAGAAAAACTGATGAGTATTTACGAGCCTTACATGGTGGGGTGTCATCTGGAAGATGCGCCGCCGGAGGCGGTAGAAGCTCTTGAAAAAGTAAAGGAATGGTCATGGAAATAGGCTCAGTAAATGCCACCGGTCAGCGAACTGGTGGTATTTTTATACCCATTTACAACATGTTTAAAAGAACAGTTTTTAAATTGTAGAAATCTTGCATCAGGATGTTAAGGACTATCTAAGAAGTATCATCATGCAATAAGAGACCGGAAAACGGACTAACCATATATCTTTTTCAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTTTCTACGAGGAAGCTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.55%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA //