Array 1 2368598-2367794 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP038504.1 Corynebacterium diphtheriae strain TH1526 chromosome, complete genome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence             	Insertion/Deletion
==========	======	======	======	====================================	============================	==================
   2368597	    36	 100.0	    28	....................................	CACCGCTATGCCAGCGTAGCCTACGAGG	
   2368533	    36	 100.0	    28	....................................	TCTTACCGAGACACTAGAGGACGGCTCC	
   2368469	    36	 100.0	    28	....................................	TGGCAAGAAAGCTCGGCGACACTGCATG	
   2368405	    36	 100.0	    28	....................................	CCCTTGAGAACCGGCTTGATCTCGCGTG	
   2368341	    36	 100.0	    28	....................................	TATGCCCATCTGACCTGCCAGTTTTGCG	
   2368277	    36	 100.0	    28	....................................	TGTCAGACTTGCGGTTGATGTCGTATTG	
   2368213	    36	 100.0	    28	....................................	ATCGTGAGGTTTGGAGTTCGCGTGAGGC	
   2368149	    36	 100.0	    28	....................................	AAAGACGCCCTTCTCACATGGCACTAGC	
   2368085	    36	 100.0	    28	....................................	TAATCGCTTGAGTCAGGACTGGGGCGCA	
   2368021	    36	 100.0	    28	....................................	CTGTTGATATTGACATCATCGTTGATAG	
   2367957	    36	 100.0	    28	....................................	CTCATCAAACTCACAAGTCTTGCTGATA	
   2367893	    36	 100.0	    28	....................................	GACAATACCGGCTCACCAACGCTCAAGG	
   2367829	    36	 100.0	     0	....................................	|                           	
==========	======	======	======	====================================	============================	==================
        13	    36	 100.0	    28	GCTGGGGTTCAGTTCTCAAAAACCCTGATAGACTTC	                            	       

# Left flank :   ACACCATTACTTCATCAAGTACTGCGTCAGTGACCGCGGAAATCGTCTCATGGGAGATGTCCACCCGCATAACAGTGGCCATATGGTGCCTGATATCGCGCACGGTCATCCCACTGGCATACAAGCTCACGATCATGTCATCGACATCCGTTAAACGCCTCGAGCCTTTCGGGACCATGGTGGGAATATACGTCCCAGCTCTATCCTTGGGGACGTCTACGGTAACTGGCCCGTCGTTGGGATCAACAGTCTTTAGGTAGGTGCCGTTGCGATAATTGTAGATCCCAGCAGCAGCTTTAGCTTCGCGATTTCAGCATGAGCAAGCAGCTTTTCCTCAGGTCGCGTCAATCTTGGCCTTATCAGCCGAGTCTCGTCTTACCACAGTAGTCATTCTGACTTATCTCCTTATGCGGAATAGAATCCCAAACACAAACCATCAGGCACCCTCATTCCCAAAAACCCTGATAAACTTCTCCTACGGTTCATCCCCGCTGGTGCGG
# Right flank :  AGGTAGCCCAAAAATCCTGTTTAACATGGTTTTTTGGGCTACCTGAAGTCTAAAAAATCGCGAGTTGATCAGGCTTTTCTTCGCCAGAAACCTCTGCAGAAGAAGAAAAACGGATCATCTTCGACCATTGGATGTCCGATACCGAAAGGATTCGAACATCCCCACCTGGGGGTAATTTTTCTTTAATTAATTTCACCAAATTAGATAACTTTGCGGCCAGAGGCAGGTACTGCACATATACACTCAGCTGTGCCATACAGAATCCAAGATCTAAAAGATTCTGACGAAACGCCGTTGCTTGCTTTCGCTGAGTCTTTGTCTTCACCGGAAGATCAAACATCACCACACACCACACCGGATCGCTACCTTTCTTCGGCATCGAAGGGACCTTCCCAAATAGGCGGTACTAATTTCTCAACATCACCTTCCACATACCGCCCATACTGTTGAGCGAACGCGGTAAAAACCGTCGGAATTGACTGCCCCGCAGAATTGAAAGG

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GCTGGGGTTCAGTTCTCAAAAACCCTGATAGACTTC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:52.78%AT]
# 	Reference repeat match prediction:         R [matched GCTGGGGTTCAGTTCTCAAAAACCCTGATAGACTTC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-3.20,-1.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [61.7-45.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.64,4.5   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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