Array 1 117567-119452 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHOIA010000002.1 Bacteroides sp. MSK.18.39 NODE_2_length_372369_cov_127.073, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 117567 47 89.4 28 A.........A....T.........A..............A...... AGAAATTAAAAAAAAGTCAGCCAGCAGA 117642 47 100.0 30 ............................................... ACGAACATGTAACACATTTGGAAGATTAGA 117719 47 100.0 29 ............................................... ATAAAATTAGGGTCATAACACATTGACGT 117795 47 100.0 29 ............................................... ATTACAAAAAAGTACATCTTCACAAAACA 117871 47 100.0 29 ............................................... CGATGTGGTTATGTACGAGGCGGCAGCGC 117947 47 100.0 29 ............................................... ATTCTAAGGTGGTTATAAATTCGCATGCA 118023 47 100.0 29 ............................................... CGACCATTGCTGGGCTTTCTTTTCATTGC 118099 47 100.0 30 ............................................... AGCAAACCAATAATATAAGATTCCTCATCA 118176 47 100.0 30 ............................................... AGCAAACCAATAATATAAGATTCCTCATCA 118253 47 100.0 30 ............................................... AGCAAACCAATAATATAAGATTCCTCATCA 118330 47 100.0 30 ............................................... TTTACTACAATAACCCTTGACGCAATCCGG 118407 47 100.0 30 ............................................... GATTGTCATATAATTTTCTTAGTCCATCCG 118484 47 100.0 30 ............................................... AGTATACTCGCTTACCCCTGAAAACTTTAT 118561 47 100.0 30 ............................................... CATTTGCGTTAACACAGTATTAGCCTTATT 118638 47 100.0 30 ............................................... CTAATTTACAGGAACGAGTAAGAGAATATA 118715 47 100.0 29 ............................................... TACATTAATCCCGCCTACATCTAAGCGGT 118791 47 100.0 30 ............................................... ACATATGGCTGTAAAATTTCCAGATAGGCT 118868 47 100.0 30 ............................................... CGCGTATTCGATAACTGGGATCGCGAGAAC 118945 47 100.0 30 ............................................... CACCTTCCTCTAAAGCGCCTGCACTTTCCT 119022 47 100.0 30 ............................................... TAAGGAAGTTGTATACTTTTTGTGATAGGT 119099 47 100.0 30 ............................................... CACAGCGGGATAACCCCGCTGTCTTTTAAA 119176 47 100.0 30 ............................................... TAGTCTTCCCACATAGAACGAAGAGTTACC 119253 47 100.0 30 ............................................... TAAATCTCAATTCTTTTCTAGACCAGTAGT 119330 47 100.0 29 ............................................... ACAAACCATAATACGACAAGGAAGCTTTT 119406 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 25 47 99.6 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAAT # Left flank : AGGATCTCCTAGATGTTTTGTTATAATCTTATACTGTTTCATCGTCAAATAACGATGATTATACGGCATATAACCAGTCGGTACAAGCTCTTTGGTCAACGGGTTACAGTCTTTAATCCATCGGCTCAGACAACGCACTGCATTTTTACTGGTCGTACATCCGGGGAAGTACAATGCAGCTAATACAGCAAAAGATAAGATTCGTCTCATTTCGTTTTTAAAGTTTTAATTTGTCGTTTCATTGTTTCTTTCGTTCTACAAATATACAACATCAAAAAGCGTTTGTCAAGTCATTTGGGATTTTATCGTTAATATAAAGGAATACCCACCTTTATTAACCCAATTACTAAGCAATTGAAACAGATTGAGCATTCTCAATATTTAACGCTAGAATTAAGTCTAATGCTCACAAAAAGAAACTTAAAAATACTTATACGAAAATGACAATCTTTAAATCACAAGAAATAACATGTTTATATTAAAAAGAGATACATGAATGG # Right flank : TACATTTCATATAATAAGATGTAATTCAATTAGTTACAAAGAAGATTAGAAAAGAAAAAAGAAGACTGTTCCCAACACAAAATCTCGCATTAATGCGAGATTTTGTGTTCTAAAACAATTCCAATTGCTGCCCTGGTGTATTGACACTCTGCGCCTTCTTTCCATAGAAAAGTTCTATGTCCCCAAATTGTTTATCCGTAATACACATGACTCCGACATGCCCTAGTTCCGGAAGGAAAGATTTAACTCTTTTTATATGTACTGCTGCATTCTCGCTACTAGCACAGTGACGTACATAAATGGAAAACTGAAACATCGTAAAACCATCTTTTTGCAGATTCTTTCTGAAATCCGCATAAGCCTTCTTTTCCTTCTTCGTTTCAGTTGGCAAATCAAAAAGAACGAGCACCCACATTATACGATATTCACTAAGACGATCCATTACCGTTCGGGATAGGCAACTCGGCGAAGCTCTCCATTGAAACATTTATAAAGTGAGG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.40,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.78 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //