Array 1 22577-22082 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKQQ010000026.1 Desulfitobacterium hafniense isolate MGYG-HGUT-01388, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 22576 30 100.0 35 .............................. CGGAAAATCGCGTCCATAAACGCCAGATTAGCCGA 22511 30 100.0 35 .............................. CACTCTACATCACGATGTTTTCTCACTGTTTCTCA 22446 30 100.0 39 .............................. GCTTTTGAGTGGGGTGGATGCGGTCTTGTTGTTGCTGCG 22377 30 100.0 35 .............................. TGTATCAATACTTTGCGTCAAGTGGGGAGTAAACA 22312 30 100.0 37 .............................. TCAAGACCCAGCGCGGTTCGTCTCAATGTGTTCGGAA 22245 30 100.0 35 .............................. GAGCTTTTGGGCCCTACCTTACAAGTCAGAACATT 22180 30 100.0 39 .............................. TCCAGAATTTGAATTGTTTTTTCTAATTCAAATTTTAGT 22111 30 93.3 0 ...C......................T... | ========== ====== ====== ====== ============================== ======================================= ================== 8 30 99.2 37 GTTGTTAGCTTACCTATAAGGAATTGAAAC # Left flank : TTAGCTTACCTATAAGGAATTGAAACATGCGGATATTAAATTCTTTCATGGCATCGGCAACT # Right flank : TGAGGTTGAAGGTCACAAATTTATTGAGTGCTGCTAAAGACAATTTAAAATAGAAAACTTTCTTAGCTTAGTATAGAATTAAAACAACTTAAGTAATAAGAATACTGCTTTGGGGGTGAAAAATTTGAAAAAGATGTTTTTAGCAGCTTCGGCTCTGGCATTGAGTTTGGCTTTGGTCGGCTGTAGTAATGTGAAAGTAAGTGTGGAAGAAAAGGATCAAAGTACGTTATCCGTAGAAAGCATACAGTTGGAACGANNNNNNNNNNACAGTTGGAACGAAAAATTATTATCAGAAACTCCATAGCCGATCCTTTGCCCGAAGAAGCTCAAAAAGCCCTGTCTCTGCCGGATAAAGGTGGTCCACAACGACTGCCCAATGTTGATTTAAGCACTCCAATCATAATTACTAAAATGCCTTATCCTGAAAGACCCCAGCCATAGCAATAACAGCGGCAGCGGCGGAATGGAGATTAGTATGAAAGAATTGTACATGAATCACT # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTAGCTTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 1 85878-85714 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKQQ010000034.1 Desulfitobacterium hafniense isolate MGYG-HGUT-01388, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 85877 30 100.0 36 .............................. ATGCGACTCCAGTCTCCGTCTCAGCCCTAGAAGATA 85811 30 96.7 38 ........T..................... AATACATTAAGCTTTTCCGACAAATCGGAACGGTCTAG 85743 30 93.3 0 .......A.............A........ | ========== ====== ====== ====== ============================== ====================================== ================== 3 30 96.7 38 GTTGTTAGCTTACCTATGAGGGATTGAAAC # Left flank : AAACTAAGGAAGGCCGCAGTTAAGGCTACAACCACAGTAAGTTGTTAGCTTACCTATAAGGGATTGAANNNNNNNNNNGTTAGCTTACCTATAAGGGATTGAAACATTTTAGTCATCTCAATTCCTTCTTTCTTTTTAAAAGTTGTTAGCTTACCTATAAGGGATTGAAACTCAGGGAATGTATCTCAGGAAGACATAACAAATCTAGTTGTTAGCTTACCTATAAGGGATTGAAACTGTTTTTTACCTTAATTTCTCCAGTCTCATCATTTAGTTGTTAGCTTACCTATAAGGGATTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTAGCTTACCTATAAGGGATTGAAACCTGCTGAAAAAGACGGGCAAGGATTGGGGCGCAG # Right flank : TGCCGATTGAGGATTCCCGGGAGTCTTTCACCGCGGGTGTTTGACCTACCTTAATTCGGTTTACTAGCGGGCCGTGAAACGGGCTGCTGACAACGCAACAGGCTGTATGCTCCCATAAGAGGGAGTATACAGCCTGTTTGTTGTGGGGGATGGGTGTGAGAGCCATGCCCGCCAGAATCCCTGTAAGGAGAACGAGCAGAAAGCGAGCGGAGAGCTGGACGATGATGTCGCGGCTTGTAAATCCATAGGGTCATGAGCAGTGCCCCAAGGAATCCTCTGGCAGAGACGCTTCCGGGCGATCGTCTGGGCGACATAACCGTCGATATCGGCAATCTTGGCAAAGGGAAACTGTCCGGTGTAGTCTCTTACCTTGTCACGAATAGAACTATTGGGAGTTATTGGAGGAGGAAAAAAGACAGTTGTTCGCACAATGCTGACTCGGGAATCGGAACATTGATCTTGACCTTGCCCCTGCTCCCTGCTTTCATTCTTACTCTTTT # Questionable array : NO Score: 7.01 # Score Detail : 1:0, 2:3, 3:3, 4:0.84, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTAGCTTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.90%AT] # Reference repeat match prediction: R [matched GTTTGTAGGGTACCTATGAGGGATCGAAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 86829-86665 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKQQ010000034.1 Desulfitobacterium hafniense isolate MGYG-HGUT-01388, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 86828 30 100.0 35 .............................. GTGGCTGAGGAGACGATGGATGAGGATGCCGTTGC 86763 30 100.0 39 .............................. TCAACCGTCTGGTGGAGCTGACCGGCACACCGGCCCCCA 86694 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 3 30 100.0 38 GTTGTTAGCTTACCTATAAGGGATTGAAAC # Left flank : | # Right flank : TTAAGTTTTTCAAGTGATTTAATTGCTCTTTCTTTGTTGTTAGCTTACCTATAAGGGATTNNNNNNNNNNTTAGCTTACCTATAAGGGATTGAAACTCTACTTCAACCTCAAATAAATGACTAGCCTCTTTGTTGTTAGCTTACCTATAAGGGATTGAAACAAATTTTTTTCTAGCATAATTATTCAACCTCTTTCGTTGTTAGCTTACCTATAAGGGATTGAAACCTTCTTGTCTCAGGCAGGGATCACGGAGATGAAGCGTTGTTAGCTTACCTATAAGGGATTGAAACTAAGGAAGGCCGCAGTTAAGGCTACAACCACAGTAAGTTGTTAGCTTACCTATAAGGGATTGAANNNNNNNNNNGTTAGCTTACCTATAAGGGATTGAAACATTTTAGTCATCTCAATTCCTTCTTTCTTTTTAAAAGTTGTTAGCTTACCTATAAGGGATTGAAACTCAGGGAATGTATCTCAGGAAGACATAACAAATCTAGTTGTT # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTAGCTTACCTATAAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : NA // Array 1 218-56 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKQQ010000059.1 Desulfitobacterium hafniense isolate MGYG-HGUT-01388, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =================================== ================== 217 31 93.5 35 NN............................. GAAATCACTGCTGATGAGTACAACACCCTCACCAT 151 31 100.0 34 ............................... GTTGTGGAGGAGTACGAGGGCAAGGTTAAAAAGA 86 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== =================================== ================== 3 31 97.8 35 GTTGTTAGCTTACCTATAAGGAATTGAAACT # Left flank : ACCTATAAGGAATTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTAGCTTACCTATAAGGAATTGAAACGCGCTGAAGATTGCCCTTTTATACGCACTATTACCCGGTTGTTAGCTTACCTATAAGGAATTGAAACGATTCAATCTCGCCGCTCAAGCGGCAATGTGGTTCAGTTGTTAGCTTACCTATAAGGAATTGAAACGACGCATGCCCCGGTGAGGTGCTGAACGCTGTCGAAGTTGTTAGCTTACCTATAAGGAATTGAAACGAGTGTAGTCAGGCCCCCAGCCAGATTCAGCATTTGTTGTTAGCTTACCTATAAGGAATTGAAACATCTTAAGGCCAGCAGCGCGGGAATGGCAGATGATAGGTTGTTAGCTTACCTATAAGGAATTGANNNNNNNN # Right flank : TTCACTTCAGCGTTGGTTAACTTTTTACCTCCTTGTAAGATAGATATTGGGTTAAG # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTAGCTTACCTATAAGGAATTGAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.74%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : NA // Array 2 584-222 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKQQ010000059.1 Desulfitobacterium hafniense isolate MGYG-HGUT-01388, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 583 31 90.3 36 NNN............................ CGCTGAAGATTGCCCTTTTATACGCACTATTACCCG 516 31 100.0 35 ............................... ATTCAATCTCGCCGCTCAAGCGGCAATGTGGTTCA 450 31 100.0 35 ............................... ACGCATGCCCCGGTGAGGTGCTGAACGCTGTCGAA 384 31 100.0 34 ............................... AGTGTAGTCAGGCCCCCAGCCAGATTCAGCATTT 319 31 96.8 36 ..............................A TCTTAAGGCCAGCAGCGCGGGAATGGCAGATGATAG 252 31 87.1 0 ...........................NNNN | ========== ====== ====== ====== =============================== ==================================== ================== 6 31 95.7 35 GTTGTTAGCTTACCTATAAGGAATTGAAACG # Left flank : ACTTCGTTGCGTGCGCGGAACAGAAGCGTACTCAGTCGTTGTTAGCTTACCTATAAGGAATTGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGTTAGCTTACCTATAAGGAATTGAAACTAACCTCCTGCAATATTATTTTATTTTCTGTTATGGTTGTTAGCTTACCTATAAGGAATTGAAACTCTTTAGGGCTATCCTGTTTTGGGTTAGGTGGTTCTTGTTGTTAGCTTACCTATAAGGAATTGAAACTCATGTTTCGCCTTTCACTCAGGCACTCTTTCCACAGTTGTTAGCTTACCTATAAGGAATTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : NNNNNNNTGTTAGCTTACCTATAAGGAATTGAAACTGAAATCACTGCTGATGAGTACAACACCCTCACCATGTTGTTAGCTTACCTATAAGGAATTGAAACTGTTGTGGAGGAGTACGAGGGCAAGGTTAAAAAGAGTTGTTAGCTTACCTATAAGGAATTGAAACTTCACTTCAGCGTTGGTTAACTTTTTACCTCCTTGTAAGATAGATATTGGGTTAAG # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTAGCTTACCTATAAGGAATTGAAACG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA // Array 3 1112-764 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKQQ010000059.1 Desulfitobacterium hafniense isolate MGYG-HGUT-01388, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ========================================================================================= ================== 1111 31 100.0 34 ............................... TCGTTGCGTGCGCGGAACAGAAGCGTACTCAGTC 1046 31 93.5 89 .............................NN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 926 31 96.8 34 N.............................. AACCTCCTGCAATATTATTTTATTTTCTGTTATG 861 31 100.0 36 ............................... CTTTAGGGCTATCCTGTTTTGGGTTAGGTGGTTCTT 794 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ========================================================================================= ================== 5 31 98.1 48 GTTGTTAGCTTACCTATAAGGAATTGAAACT # Left flank : TAAGAATTTAAAGCTTGGTACGGGGAGGCTATACGTGGCTGGCAGGAGGTCCAATCCCTAATCCAGCCATCTTCTGTCATTTAACCCAGAGCGGATGCGATAGCATGGAGAGGCTTTGAGGAGAACTAGTTAGTGAAGGTATAAAAATGGAGAGGGAGCCAACCAAGGTGATGGTGAGTGCTTGAAGGATTTTATCTTTGCTTTCAGCGTTCTATATGCTAACATGATCAGGAAGGGTAGAAATTGATAGCCTGATGTCGAAGTGGGTTAGATAGGACTAGTAAGTCTATACAATAGTAAAAAAGGCGATAAATATAAAAATTACGAGTTATTCAGAGTCAGGATTTCAGCATGTATTTTGTCGTCGATGTGCAGTAAGGTAAAAACCCCTGGAGACCGACGACAAAGAATAGGGCCAAGTAAGCGGATTGAGGAGCAAAGATCAGTTTGGATAAATTCGGGTGCTTGCCGAAGATGCTGATTTAATGCGGGTAAAATGG # Right flank : CATGTTTCGCCTTTCACTCAGGCACTCTTTCCACAGTTGTTAGCTTACCTATAAGGAATTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTAGCTTACCTATAAGGAATTGAAACGCGCTGAAGATTGCCCTTTTATACGCACTATTACCCGGTTGTTAGCTTACCTATAAGGAATTGAAACGATTCAATCTCGCCGCTCAAGCGGCAATGTGGTTCAGTTGTTAGCTTACCTATAAGGAATTGAAACGACGCATGCCCCGGTGAGGTGCTGAACGCTGTCGAAGTTGTTAGCTTACCTATAAGGAATTGAAACGAGTGTAGTCAGGCCCCCAGCCAGATTCAGCATTTGTTGTTAGCTTACCTATAAGGAATTGAAACATCTTAAGGCCAGCAGCGCGGGAATG # Questionable array : NO Score: 4.59 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-1.36, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTAGCTTACCTATAAGGAATTGAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.74%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.5 Confidence: HIGH] # Array family : NA // Array 1 1-160 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKQQ010000063.1 Desulfitobacterium hafniense isolate MGYG-HGUT-01388, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 1 29 93.5 36 --............................. GGTTGTAAAGGTCGTATTTCATGCAGGAGAGGGCTA 66 31 100.0 33 ............................... ACCGACGGGAAGCTTGGTGTAATAGGTAGAGCC 130 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ==================================== ================== 3 31 97.8 35 GGTTGTTAGCTTACCTATAAGGGATTGAAAC # Left flank : | # Right flank : CAAAAACAATCTCCAGCTAAAGATGGATTTAGGCCGAGTTGTTAGCTTACCTATAAGGGATTGAANNNNNNNNNNTCAATCCCTTATAGGTAAGCTAACAACAAGGGTTTCTCTTCTCCCAGCGGGAGGCTGAAGGCAGTTTCAATCCCTTATAGGTAAGCTAACAACCGTTTTGAAGTCCATTTCCACGGACATCAGTGTTTGTTTCAATCCCTTATAGGTAAGCTAACAACTACGATAGTCCTCCTGAAGTTCGCCCCTTGACTGGGTTTCAATCCCTTATAGGTAAGCTAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCAATCCCTTATAGGTAAGCTAACAACTGACACGGGGGGCGCGCCTTATTATGGCGAGCCACGTTTCAATCCCTTATAGGTAAGCTAACAACTTTTATCGATTTGACGAAAGAAGAGGAATTCAGCCTGTTTCAATCCCTTATAGGTAAGCT # Questionable array : NO Score: 8.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTGTTAGCTTACCTATAAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : NA // Array 2 1061-232 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKQQ010000063.1 Desulfitobacterium hafniense isolate MGYG-HGUT-01388, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================================== ================== 1060 30 100.0 36 .............................. TTCTAAAAGAGGGGTAGTAAAGAAATGGAATATCAG 994 30 100.0 34 .............................. AGAGTTGTAGTAAGTTTTTTCGGCCTCTTCTTCG 930 30 100.0 37 .............................. CTACTATTGGCCTGGATTCAGGACACAGCCCGCGCGC 863 30 100.0 36 .............................. CTCTGTAGAAGAAATCCTGAAAGAGAACAAAGTCAT 797 30 100.0 35 .............................. TGGAGGTGATAGAGGCCACAAAACTCCAAAACCCC 732 30 100.0 37 .............................. CTCGAATAATAGACTTGTTCTCTGAACTTGCAGTTCG 665 30 100.0 36 .............................. AGGCTGAATTCCTCTTCTTTCGTCAAATCGATAAAA 599 30 100.0 35 .............................. GTGGCTCGCCATAATAAGGCGCGCCCCCCGTGTCA 534 30 93.3 47 ............................NN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 457 30 90.0 35 NNN........................... CCAGTCAAGGGGCGAACTTCAGGAGGACTATCGTA 392 30 100.0 35 .............................. AAACACTGATGTCCGTGGAAATGGACTTCAAAACG 327 30 100.0 36 .............................. TGCCTTCAGCCTCCCGCTGGGAGAAGAGAAACCCTT 261 30 90.0 0 ...........................NNN | ========== ====== ====== ====== ============================== =============================================== ================== 13 30 97.9 37 GTTGTTAGCTTACCTATAAGGGATTGAAAC # Left flank : AAGCTAACAACGGCAAGACGTATCATGTGCCGGGCGATATGACTTACGTTTCAATCCCTTATAGGTAAGCTAACAACTACGTCGAGGCCGAATTATATAAATATCCAATTCGGTTTCAATCCCTTATAGGTAAGCTAACAACATTCTATGTACACGCCTATTGACGGAAGGTATTTTTGTTTCAATCCCTTATAGGTAAGCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGCTTACCTATAAGGGATTGAAACTACAGTGGTGTGCCTATTGCCGGCCCGGACGGACA # Right flank : NNNNNNNNTTCAATCCCTTATAGGTAAGCTAACAACTCGGCCTAAATCCATCTTTAGCTGGAGATTGTTTTTGTTTCAATCCCTTATAGGTAAGCTAACAACCGGCTCTACCTATTACACCAAGCTTCCCGTCGGTGTTTCAATCCCTTATAGGTAAGCTAACAACCTAGCCCTCTCCTGCATGAAATACGACCTTTACAACCGTTTCAATCCCTTATAGGTAAGCTAACAA # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTAGCTTACCTATAAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 3 1419-1646 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKQQ010000063.1 Desulfitobacterium hafniense isolate MGYG-HGUT-01388, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1419 30 100.0 35 .............................. CGAATTGGATATTTATATAATTCGGCCTCGACGTA 1484 30 100.0 36 .............................. GTAAGTCATATCGCCCGGCACATGATACGTCTTGCC 1550 30 100.0 37 .............................. CATTCAACAAAGGCCCCGGTGCCCATGGCGAAGGCCA 1617 30 90.0 0 ...........................NNN | ========== ====== ====== ====== ============================== ===================================== ================== 4 30 97.5 36 GTTGTTAGCTTACCTATAAGGGATTGAAAC # Left flank : TAAGCTAACAACCGAAGAAGAGGCCGAAAAAACTTACTACAACTCTGTTTCAATCCCTTATAGGTAAGCTAACAACCTGATATTCCATTTCTTTACTACCCCTCTTTTAGAAGTTTCAATCCCTTATAGGTAAGCTAACAACTGTCCGTCCGGGCCGGCAATAGGCACACCACTGTAGTTTCAATCCCTTATAGGTAAGCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGCTTACCTATAAGGGATTGAAACAAAAATACCTTCCGTCAATAGGCGTGTACATAGAAT # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAATCCCTTATAGGTAAGCTAACAACTACTACGGCACCGGGGAAGGACAAAGCATGGATGATCGTTTCAATCCCTTATAGGTAAGCTAACAACCAAGGTTAAGGCTATTATCAGTTCTTCCTAATAGAGTTTCAATCCCTTATAGGTAAGCTAACAACGTAAAGTTACCTTCCTGATTTGGAAGCCTATATTTATGTTTCAATCCCTTATAGGTAAGCTAACAACCCATTTTACCCGCATAAAATCAACATTTACAGCTCCCTGGAGCCGTCTCAAAAATTTCACTATTCTCTGCAGGCCGCTTACTAAGCGACATCTCTTGTCGTCGATC # Questionable array : NO Score: 8.74 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTAGCTTACCTATAAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA // Array 4 2040-1878 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKQQ010000063.1 Desulfitobacterium hafniense isolate MGYG-HGUT-01388, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 2039 30 100.0 37 .............................. ATAAATATAGGCTTCCAAATCAGGAAGGTAACTTTAC 1972 30 100.0 35 .............................. TCTATTAGGAAGAACTGATAATAGCCTTAACCTTG 1907 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 3 30 100.0 36 GTTGTTAGCTTACCTATAAGGGATTGAAAC # Left flank : GAGCACACTATCGAATAGACGGTATGCAGCGACTTTTGAAAGGGATAGGCATAAATTTGGGGGAGAGAAAATCCGGAAGATGAGGTATAATTATGTTTGTGATCTTAGTCTATGATATGGGGGAAAAGCGGGTAGCCAAAGCACTGAAGCGGTGCAGAAAGTACCTGAACTGGGTGCAGAATTCTGTCTTTGAGGGAGAGATTTCGGAAAGCAATCTGGCAAAGCTGAAGATGGAGCTGGACAGGATTATAGTGCCGGAAGAAGATTCGGTTATTATTTATACACTGAGGACGACCCGCTATTCTGAGCGGGAGATCATGGGCTTGCGAAAAGGAGGCCAGAATTTAATCATATGAAATTGTCGTCGATGTGCAGTAAGGTAAAAATCCCTGGAGATCGACGACAAGAGATGTCGCTTAGTAAGCGGCCTGCAGAGAATAGTGAAATTTTTGAGACGGCTCCAGGGAGCTGTAAATGTTGATTTTATGCGGGTAAAATGG # Right flank : GATCATCCATGCTTTGTCCTTCCCCGGTGCCGTAGTAGTTGTTAGCTTACCTATAAGGGATTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAATCCCTTATAGGTAAGCTAACAACTGGCCTTCGCCATGGGCACCGGGGCCTTTGTTGAATGGTTTCAATCCCTTATAGGTAAGCTAACAACGGCAAGACGTATCATGTGCCGGGCGATATGACTTACGTTTCAATCCCTTATAGGTAAGCTAACAACTACGTCGAGGCCGAATTATATAAATATCCAATTCGGTTTCAATCCCTTATAGGTAAGCTAACAACATTCTATGTACACGCCTATTGACGGAAGGTATTTTTGTTTC # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTAGCTTACCTATAAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA // Array 5 7970-7609 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKQQ010000063.1 Desulfitobacterium hafniense isolate MGYG-HGUT-01388, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 7969 30 100.0 39 .............................. CTTGGAATTGCCATAGGTCATCCCTCCATAAATTTGATA 7900 30 100.0 35 .............................. TAAACTCCTTCAAAGTGTCGATAAATGTCTCTCCG 7835 30 100.0 35 .............................. ATAGATTCTGCAAAACCGATAACTCCGTATGCCTT 7770 30 100.0 35 .............................. TTTTTAATCCTTAATCTTTTCATTCAAGCCCTCTT 7705 30 100.0 37 .............................. AGCAACTTGGAAAAAAGCATCCCGTCAACCCCCCCGC 7638 30 93.3 0 ............................NN | ========== ====== ====== ====== ============================== ======================================= ================== 6 30 98.9 36 GTTGTTAGCTTACCTATGAGGGATTGAAAC # Left flank : ACCTATGAGGGATTGAAACTCCGGACGGACATAACTTCTACCCCTTCCCGTTTCGTTGTTAGCTTACCTATGAGGGATTGAAACCTCCAAGGATGGAGATTTAGAAGGAGAAGAACTAAAGTTGTTAGCTTACCTATGAGGGATTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTAGCTTACCTATGAGGGATTGAAACTATTCCTCTGGGAGCCGCAACTGAAAACTCTTGC # Right flank : NNNNNNNNTGTTAGCTTACCTATGAGGGATTGAAACGACTGTACCTGACGGTATAACAACAGTAATGGTTAGGTTGTTAGCTTACCTATAAGGAATTGAAATATGAACTTGGTAGGGCTTTGTTTGATGTTCGTTATCTTGAAAAAAGTCTCAAGACCCTTGATAATTCCCTTAAGGCCTGTGAACAGAGTTTAAAGAATATATGTAATACATTTCGCTGGCTGCAGCTCCTGGCATTGTATTACATATATCCTTGTGGTAACCTAAAAATTAGGAGGGATAAGGCGTGGATGATAAATTAGATTTGATTTTAGACAGATTAACGGCAATGGATAGAGGCTTAAAAGCTGAGATAAGTTCTTTAAAATCTGAGATAGGTTCTTTAAAACCCGAAATAGGTTCCTTAAAATCTGAAACTCAGGCGATTAGTAAAAAGGTGGATATGACATGGAGAGCCATTCAGGAATTAAGGATGATAAAACTGAGTTGAACGAACTTCG # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTAGCTTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 6 9213-8386 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKQQ010000063.1 Desulfitobacterium hafniense isolate MGYG-HGUT-01388, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 9212 30 100.0 34 .............................. GTTTTTTGAATTTCGGGTATAGTTTCTTCGTGAG 9148 30 100.0 39 .............................. TATCCTTTGGGAATGCTAATCGTTTTTGCCCCCGGACCC 9079 30 93.3 5 ............................NN NNNNN Deletion [9045] 9044 30 90.0 36 NNN........................... TCCTTTTTAAGCAAAAGACCCGGGGACTCTGGGAGG 8978 30 100.0 35 .............................. ATGATTCGCAGACTGAGGATTATGTCGCAGAGGTT 8913 30 100.0 36 .............................. CTAAGTGGGTTAAAGCGTTAGAAGACTACGCTCTGA 8847 30 100.0 35 .............................. CTGTTCAGATAGAGGAGTGACGGAAGTGGAAGAGA 8782 30 100.0 34 .............................. CGGAGAATTCCCACTTCGAGGAGCCTGTCACCTG 8718 30 96.7 8 .............................N NNNNNNNN Deletion [8681] 8680 30 96.7 39 N............................. ACTAAATATGAAGGTGCATTTTTACTTTGTGGACTTCCA 8611 30 100.0 35 .............................. AGTCTAAGAGGTATGACCCAACCGGAAATTTTCGA 8546 30 100.0 36 .............................. CGCCGCTGACCGAAACCAGGCCACCCTTGTCTATGA 8480 30 100.0 35 .............................. TCCGGACGGACATAACTTCTACCCCTTCCCGTTTC 8415 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 14 30 98.3 31 GTTGTTAGCTTACCTATGAGGGATTGAAAC # Left flank : TACGGCTCTTATCCGGGAGATCGTTCTCAAGGCGGATCGCTACTATTGCCGGGCAGGTGGGTATTTGTATGAGTATAAAGGGCAGCGGACCTTTGAGAAATCAGTGGATTTCCTTTATGAGAAAGATGGGAAGCCTATTGCGTTTATCCCTAAAAGTGATGACCTGGATTCGCCTTTGGATCTCAGAGTGGCGCAGTTCGGAGAGGACTTGGTATGTCTTGTTTAATGGCCTTGGCTTAATGGGCGGAGATTATTTTGCTATATGAAATTGTCGTCGGTATGCAGTAAGGTAAAAATGCCTGGAGACCGACGACAAGGACTATGGCTTAACAAGCAGCTTGTGGGGTAAACGCGGATTCTCCGGGCTGAACTTGTTAAGCCATAAATGCTGATTGTATGCGGGTAAAATGGGTTGTTAGCTTACCNNNNNNNNNNTGTTAGCTTACCTATGAGGGATTGAAACTAGAGTATGAAGCTCCCCCAAGAGGGAAGACCCTTCC # Right flank : CTCCAAGGATGGAGATTTAGAAGGAGAAGAACTAAAGTTGTTAGCTTACCTATGAGGGATTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTAGCTTACCTATGAGGGATTGAAACTATTCCTCTGGGAGCCGCAACTGAAAACTCTTGCGTTGTTAGCTTACCTATGAGGGATTGAAACCTTGGAATTGCCATAGGTCATCCCTCCATAAATTTGATAGTTGTTAGCTTACCT # Questionable array : NO Score: 8.81 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:-0.35, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTAGCTTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.87 Confidence: HIGH] # Array family : NA //