Array 1 25024-23897 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAVY01000058.1 Streptomyces avermitilis MA-4680 = NBRC 14893, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 25023 29 100.0 32 ............................. CTCGCAGCTACACGGCGGGGCCCGAAACGGGA 24962 29 100.0 32 ............................. TCGAGGGCGGCCATGCGCTGGAGGTGCCAGGG 24901 29 100.0 32 ............................. TTCGGGTTCCGGCCGAGGCTCTGGTGCCAGTA 24840 29 100.0 32 ............................. ACGCACCAGCTTCTCGTGCGGCCGGACACCCC 24779 29 100.0 32 ............................. TGCAGGACGGCTTGCTCGACGAGGAAGCGGTC 24718 29 100.0 32 ............................. TGGGGCTCCGTCTCCAGGGACGACAACGGCCA 24657 29 100.0 32 ............................. CTCGCCGACGGCTTCGAGGTCTCGGTGCCGCA 24596 29 100.0 32 ............................. CCGGCGCGCTGGCGTTCCTGCAAGACGAGAAG 24535 29 100.0 32 ............................. ACGGAGCTGCGGGCAGAGCTGACAGCGACGAA 24474 29 100.0 32 ............................. TGGGTGATGCTCTCGTCGATGCCGAGGATGAG 24413 29 100.0 32 ............................. CCGTTCCCCTGGATCCAGCGCGGTGAGGTCCA 24352 29 100.0 32 ............................. ACGGTCGGCCAGCAGTTGCGGCGCGACCCGTT 24291 29 100.0 32 ............................. CCGAGGAAGCCGAAGGCGCCGACTTCGCCATG 24230 29 96.6 32 ..G.......................... GCCGTCACCACCACGAACCGGAAGCTCACTTC 24169 29 96.6 32 ..G.......................... TAGTCCCGCCTCCAGGCCCCGCCCTGAGCCGC 24108 29 93.1 32 ..G..............A........... TAGTGCGTGCCAGTCGACACCGAACTCAGGGT 24047 29 93.1 32 ..G......................A... CGCCGCGCCGTGGCTTCTTCGTTCGGCCGGCC 23986 29 86.2 32 ..G..........A......A..T..... TGCTTCCCGATCAGCGAGGGCGGGAAGCGGGC 23925 29 86.2 0 ..G................G...A.T... | ========== ====== ====== ====== ============================= ================================ ================== 19 29 97.5 32 GTTCTCTCCGCGCGAGCGGAGGTGGGTCG # Left flank : TTGGCGGGCGGCTTCGGTGCGGAGGTCTTCG # Right flank : ATGGCCAAGGGCGCCGAAGAGATCCGCGGCAAGTCGTCCCCGCGCCCACAGGGGCAGCTCCGCCAGGGACGCCATCGGCCGGGCTGGCAGTCCTCATGCCGCTGCCTGGCGGTGTCCTCCACTCGAAGGTCATGCGCTCATCTGCCCAAGTTGCAAGGCAGTTGATGCCTCTAGTGGCGTCGGACATCGACGTAGCGACCTCGCTTACGCCGCGTCAACCGACACCCCGCCTGCGGCCGGCCGCAGGCGGACAGCGTGCAGTTCGCCCAAGCGCCAGCGAAGGAGGAACTCGACGGTACGGCGGCCCGCCGCGTCTGCAGCCTCTTCCGCACCGCGGCCGCGGTGCCGCAGGCACGCCTCATACGCGGCGTCGGCCTCGACCACCACATCCTCCGCCCCCAGCAGCCGGCGCAGCGCCGCCGCGCGCCGTTCGTCCCGGATCTGTTGCGCCACCTGCGGCGCGTAGAACGCGACCAGAGCCGGATCGGCGTCCGGACCGC # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTCTCCGCGCGAGCGGAGGTGGGTCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGGGTCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [28.3-16.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 3664-32 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAVY01000068.1 Streptomyces avermitilis MA-4680 = NBRC 14893, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================= ================== 3663 30 96.7 31 .............................A CACGGCTGTTGAGCCGGACGGCGCCGAGACC 3602 30 100.0 31 .............................. CCCGATCGAGGGCGGTGTGAGCATGAGTATC 3541 30 96.7 31 .............................A CGTCGTGGGACTGGTTGGCCGCCGCGTTGAA 3480 30 96.7 31 .............................C AGGTCGCCAGCCGCTGCCCGGTGTCGCAGTC 3419 30 96.7 31 .............................C CCCATGATGATTTGGCCAGGCACCCGAACCA 3358 30 93.3 31 ............................CC ACTAACTCAAGACGCAATGATCACAATCGGA 3297 30 100.0 31 .............................. CGATGATGCCGGCGTCGACGGCGATGGGGAA 3236 30 96.7 31 .............................T CGTTGAAGCTCATGCCGGTGCGCTTCTCCAG 3175 30 96.7 31 .............................C CGCCCGCGCCGCACTCATCCCCGACCAGGCG 3114 30 96.7 31 .............................C CCGTGAGCAGCCGACGTTCGGTGACCGGGGG 3053 30 96.7 31 .............................C CGTCGATGAGCGCCTAGCCTTGCTGGAACGA 2992 30 96.7 31 .............................T CCATGCAGCACCGCGGCGACCGCCACCCCCC 2931 30 96.7 31 .............................T TGGGGCAGTAGGTCAGCGAGGATGCCGAGCC 2870 30 100.0 31 .............................. AGAACTACGACGAGATGGCCAAGAAGACCGT 2809 30 96.7 31 .............................A ACGACACGGCCGCCTTCAGCCCGCCCCAGAC 2748 30 96.7 31 .............................C CGCCCGCACCACTGACGTGCGACGAGTGCGG 2687 30 100.0 31 .............................. CGCGCGGGTCCAACGTCCAGGTCGTCCTCAC 2626 30 96.7 31 .............................T CCACCACGCGCTCCAGGAAGCTGGTCCCCTC 2565 30 96.7 31 ............................T. GGTGTTCGTCGGCATCCCGGTGCTCGTCGTC 2504 30 96.7 31 .............................C TCGGCAAGTCCGGCGCCGACGCCCTCTACGA 2443 30 96.7 31 .............................C GCAGCGTCGGGTGCTGCCGCTTCATCAGGAC 2382 30 96.7 31 .............................C AAGCGCGGTGTACACGATGTGGGGGTGGATC 2321 30 100.0 31 .............................. TCCGCGCGGACCCGGGCGTCGGTGTCGACGC 2260 30 96.7 31 .............................C AGTTCGGCAGCCTCCTCGGCGACATCTTCGG 2199 30 96.7 31 .............................T GTGACGCCTGCCCCATCGCCAACGCGACGCC 2138 30 93.3 31 ............................TT CTTCGCCCCGGCCGTCCCCGCCGCCGCCTTC 2077 30 100.0 31 .............................. CCCGCACCTGCAGACGTACGTCCAGTCCAAC 2016 30 96.7 31 .............................T CCTGGGACGCCCTCAAGGTCCCGAACGTCTG 1955 30 100.0 31 .............................. TGGGGGAGGCTGCGGAGGCGCAGACCACGTT 1894 30 96.7 31 .............................T ACGCGTGGGGCGGCATCCTGGTGCGCACCTC 1833 30 100.0 31 .............................. CTGCCATCGAGTCATCCCCTGCGACCCCGGG 1772 30 96.7 31 ..T........................... TTTCGTACCCGAGGGCCGGGCCGATGATGGT 1711 30 100.0 31 .............................. ACATGATCGCAGCCCGATTCCTGCGGCAGGA 1650 30 96.7 31 .............................T CCACGGACGGCAACTGATCCCCGGCATGAAC 1589 30 100.0 31 .............................. TCAACCGCGCGTTCGGCCGCAGCCGGCTGGT 1528 30 96.7 31 .............................C CTGACCGGCTGGCGTTCCAGGCGACGTCGAC 1467 30 96.7 31 .............................T ACGCCATCGCCTGGCGTAACGCGCTCCTCAC 1406 30 96.7 31 .............................A CCGTCACGTTCGACACGCGGGTCGGGTTGTA 1345 30 93.3 31 ............T..A.............. ACATCCACGGCAACCCGCTGAAGCTGACCCG 1284 30 96.7 31 .............................A AAACCGGGCGCGCCGTGCAACCTGACGGCCC 1223 30 96.7 31 .............................A TCAGCAGCATCGCCAAGGCCATCGTGGCGGG 1162 30 100.0 31 .............................. AGCCGGAGGCCCGGCAGACCGCCGTCGCCGA 1101 30 96.7 33 .............................T CCGCCCGAAGAAGGACCGCAGTACCGCCCCGTA 1038 30 100.0 31 .............................. CCCTCAACAGGCCGTCAACCGAGCACGCCAA 977 30 96.7 31 .............................A CGGACAAGGGCATCACCGTCCTTTTCACCTC 916 30 100.0 31 .............................. AGACCCTTGCGAAGACCAGGCGTGCCAGTGC 855 30 96.7 31 .............................T CGCGGTGCCGCCACAGCGACGGTCGGGCGCC 794 30 93.3 31 ............T................C TGATGCTCGACATCGCGAAGGGCATGCAGGC 733 30 100.0 31 .............................. CCGAGAACGAGCGGCTGAAGGCGGCGAAGCC 672 30 100.0 31 .............................. CCATGGAGTAGCCCTGCTTGAAGGCGTCGTA 611 30 96.7 31 .............................T CGGACACCGAGGTCAGCGCGTGGCTGCTGTC 550 30 96.7 31 .............................C CACCGGGGACGTAGCCGACGTCCGCCGCCCC 489 30 93.3 31 ............T................T CGGAGCTGGCCAGGGAGCTGACCACCCGGGT 428 30 93.3 31 ..........T..................C TTCCAGGTCAGCGGGAACTGGCCAAGGCTGA 367 30 90.0 31 ...........A.......T.........A AGCCGGAGACCGAGCAGCAGGACCAGCCTCA 306 30 93.3 32 .............C...............T ACTGGATCTTCCCCGTCCGTGACGAGCACGGG 244 30 93.3 31 ......C......................C CATGGTGATCTACCACAGCGAACTTGCGGGC 183 30 100.0 31 .............................. TCCGCCTCGACGGTCTGCACCGGGCGAAGAT 122 30 93.3 31 ...T.........................T ACCCGGTTCAGTGAAGGTCAGCTGGGGCCGT 61 30 93.3 0 ......................C......A | ========== ====== ====== ====== ============================== ================================= ================== 60 30 96.9 31 GTGCTCTCCGCGCGAGCGGAGGTGAACCGG # Left flank : TCGTTCCGTACGGCCGCGAACGCCTCCGGAACCTGGGCCTGAAACGGAGGAGTGATCTTCCCCAGATCGTGCAACCCCGCCCAGAACGCCAGCACCCGCCGAGCCTCGGCCACCGTCAGCCCCAGCGCCCGTGCGACCTTCTCACGCATTTGATCACTCAGCAGCACATCCCACAGGGCACCGAACACTCCCGCGGTGTCCAGCAGATGGCAGAGCACTGGGTACGGGCGCGGAAGACCATGCTCCTTGCCCCAAAACCGGGTGTCGACCGGGACATGTCCCGGCGAGACGGACTCACGCTTCATCATGACAGCCATGCATAACAGCCCCCACTGACAACGCATCCTCACCTGCACGGATACCAGAACAGATCCCAAGCAGGGCCGTAGAATCCAAGCCGTGGAACCTCAGCCGACGCGCGGGCAGACCAATTCAAGGCGAGTCCATTCGGATACCGTAAAGAACTCGCAAAGCACCTGAAGGAGGCCAGGTCAGGAAGG # Right flank : ACGAAGACGCTTGTCGGCGACGCTTGAAATGT # Questionable array : NO Score: 5.44 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.33, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAACCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGAACCGG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 13359-14302 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAVY01000068.1 Streptomyces avermitilis MA-4680 = NBRC 14893, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 13359 29 100.0 32 ............................. CGGCGGCAGCAGCAGCCGAGCGGGCCGTGAGC 13420 29 100.0 32 ............................. CGGTCCGTAACTGGCAGAAGCGTTGCTCGGTG 13481 29 100.0 32 ............................. CCTGTACTACGCAGGCTGGAATGCGGGCATCG 13542 29 100.0 32 ............................. GAGCTCCCGTGAATGCTACCGCTTTAGCACCT 13603 29 100.0 32 ............................. CGGACACCACCAACGTCCACGGCATCGCGAAC 13664 29 100.0 32 ............................. ACGGCCATCACCCTGATCTGGGTCACCGTCTC 13725 29 100.0 32 ............................. CTGAACATCTCCAACTGGCAGTCGCAGATCGA 13786 29 100.0 32 ............................. CTGGGCGATCTGCTGCTCTAGGTCCGGTACAG 13847 29 100.0 32 ............................. GTCCACCGGCAGGACCGTGCACGGGATGGATG 13908 29 100.0 32 ............................. TCGCTGCCCGCGTTGAGCTCGGCCGTCGTCGG 13969 29 100.0 32 ............................. CCACCGAAGCCCTTGGCGCTGGCCAGCTTGGC 14030 29 100.0 32 ............................. GCTTCGGCGTCGACACCTACCGCCTGTCGACC 14091 29 100.0 32 ............................. GCTTCAGGTCTCGGCCAGACCACACTGTCGGT 14152 29 100.0 32 ............................. CACTGTCCGAGCCCCTCGCGAGCTGAAGCGGG 14213 29 100.0 32 ............................. TCGTCACGGACCTTCTTTGCGTGGCGGCTGGC 14274 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 16 29 100.0 32 GTTCTCTCCGCGCGAGCGGAGGTGGGTCG # Left flank : CCCGCGCATCGTCGGCGACATCCAGGAGCTCCTCGGCCTCGGCTCCGCCTACGACATCCCCGATCCGGAAGAACAGCTCGTCGATCTATGGGACCCCATTTCCGGACCAGTCCCCGGTGGCATGAACCACGGGACGGATACATGACCACACAGAAGAGGGAACACACTCAGTGGCCTCAATGATCGTGCTCTCCGCCACCGCCGTCCCCGACCACCTCCGCGGAGCACTCACACGCTGGTTGTTGGAAGCCACCCCAGAGCTGTACATCGGAACCGTGTCCGCCCGTGTCCGCGACGAATTATGGACTGCGGTCGCCGCATGCACTGGTGACGGCATGTCGGTCCTTGCCTACCCCAGCGACAACGAGCAAGGCTTCGAGCTCCGCACTGCAGGATCCCGCCGCCGCCACCCCGTCGAATTCGACGGCCTCACCCTGATCGCCTTCAATCGAGAAGATAAAGAAAAGGCAAACCCCCTGTAGAAACGCAGGTCAGGAAGG # Right flank : TCGATGAAATTGGTTCCGCCCGTTACCGAGAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTCTCCGCGCGAGCGGAGGTGGGTCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGGGTCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [51.7-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1520-1185 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAVY01000002.1 Streptomyces avermitilis MA-4680 = NBRC 14893, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 1519 30 100.0 31 .............................. ACGCCGACCGAACCGTCATGCTGACCGTGGA 1458 30 100.0 31 .............................. CCACCGTGGATATCAAGCTGGCCGAGCGGAA 1397 30 96.7 31 .............................T GGCGCCAGCCGATGGCCGTGCGCTCACCGTC 1336 30 100.0 31 .............................. ACGGGGACACGCTTCGCGTGATGCTGGACCA 1275 30 100.0 31 .............................. CGGACAACGAGGTGCGGGACGGGATCCGGTC 1214 30 93.3 0 .....................A.......A | ========== ====== ====== ====== ============================== =============================== ================== 6 30 98.3 31 GTGCTCTCCGCGCGAGCGGAGGTGAACCGG # Left flank : ACTTTTCAGCCGTCGCCGACAGACGCTGGCACTCGGGACTGAGACGG # Right flank : CCGGCCAGGAAGCAGAGGGTGATGACATTCGGTTCGGTCCTCGCCACCATGGCCGTGCTCGCGGTGGCCGCCGCACCGAACCTGTACGCGACCAGCACAACGAGCCACGCCGCCTTGGCCCAGGCGTAGGGCGTCTCGAAGACGACCATGGGCCGCGCGATCCGGCGCGAGAACTGGAAGCACGTGGACTGATCCGCTCATGGCCAAGTCGTCTTTCGTGGGCGCTGGTAGTCCACGGAGTACACCCGGGACGGACGCGAGAGCCGGCCTGGGTTGACGGTGGTCAGGAACAGGTCGGCCAGGGGCAGGCCGGTGAGGCCGGAGCTGTAGAGCAGGGTTGGGTCCGGCATCTCCATCTCGACGCCCTGAGGTCGGACGGCACCTGCGGGAACTGCGCGAGGACGTGCGCCGGGCGGGCGGGGCGCGTGCGGCGGCCGACGCGGTGGAGCGTCTGCTGACGCGCCGGCAGGCCGGGGAGGCTCAGCCGCTGGGCGGAGTCC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAACCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGAACCGG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //