Array 1 718457-720005 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR822046.1 Streptococcus salivarius isolate commensal strain from anonymous patient (individual 4), whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 718457 36 100.0 30 .................................... AATCGAATACAAGAGAATCGATACAGTTCT 718523 36 100.0 30 .................................... TAAAATGTGACAAGTAATATCATAATCAGC 718589 36 100.0 30 .................................... CACAGCCAGAAGATGAAGTGTATGGCTACT 718655 36 100.0 30 .................................... ATCTGAGAGGTATTTCTGATTGGTATGATC 718721 36 100.0 30 .................................... TATTGACGGCTCCATCTGTTGTCCACGTCG 718787 36 100.0 29 .................................... TTTTTTTATTCCTTCCCTCTTTTCCCCTC 718852 36 100.0 30 .................................... TCTATAAATGGTTTGATGATGTAAAAAATG 718918 36 100.0 30 .................................... CTGATGTCTTCCCTTCGTCTTGACTTGGCG 718984 36 100.0 30 .................................... AAAAGCCCTTTGCATTGTTTCAATAACCTT 719050 36 100.0 30 .................................... CATAGTAACGTCTTACTGGAGTGTCTGCGT 719116 36 100.0 30 .................................... TACAATGGCATTCATCTCAGCATGCACCGC 719182 36 100.0 30 .................................... AGACTAAGCGACTTGTCAAAGGTGCTAAAT 719248 36 100.0 29 .................................... TTTCTCTTTAGTACCGTCACCGTCGAAGT 719313 36 100.0 29 .................................... AAGCTCATGCAGGGCATTGGCTCGGTGTT 719378 36 100.0 30 .................................... CTCTAGGTTTGACAACAGAACAATTCTTGA 719444 36 100.0 29 .................................... TTCATGGACAGCTACAAGGATGTCAATTT 719509 36 100.0 30 .................................... CGGTTTTACAAGTAATCGTGCAAGGTATCC 719575 36 100.0 30 .................................... ACTGGTCTATTCGTTTTAAAAACCGTGCAT 719641 36 100.0 30 .................................... ACAAGGGCAATCCTAAAGTCGAATGGATGA 719707 36 100.0 29 .................................... GAGGTGATAATAATTGCCGATATTTAATT 719772 36 100.0 30 .................................... CCACTAATGCGGACGGCAGAAAGAACGGTG 719838 36 100.0 30 .................................... CTGAGTTGTTACCGATAGAACCGACGCCCT 719904 36 100.0 30 .................................... CGCAGTTAGTTGAGAATGACACGACATTCC 719970 36 94.4 0 ..................................GT | ========== ====== ====== ====== ==================================== ============================== ================== 24 36 99.8 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : TTGATAGTTTTGTCTCAGAGGAATCTTATGATAGTTTTTATAAGAAAATTGGTCAGCTAGCCCAAAAGTATCCAAACCTAAACTTTATTTTGTTTCCTAGTGACCAAGGATATCTAAAGATTGACGAGGAAAGTAGTAGGTTCGTCAATATTTTATCTGACCAGGTGGAGCATTTGTACGATGTTGAGTTTATGTATGAAAGGGTAAAGAAACATTATCCAAGTAATAATTTTCCGACGCGAGAAGGTTTTAGGATGTCCTTAGAGACTGTGACGCCTTATTTGTTAACAAAAATGACGAGACAACCTAGTCTCTCACTCGTTGATTCAGTAATTTTGAATATCTTAAATCAGTTGTTTCACTTTAACTATTGTATAAGATATTCTCAGACACCTGATGAGGAGCTATTACATAGATATTTAAAAAGTAAGAATTGACAAGTACAGTGATTGATTCTATAATCACTATGTGGGTATAAAAACGTCAAAATTTCATTTGAG # Right flank : TTTGATTCAACTTAAAAAGCCAGTTCAACTGAACTTGGCTTTTTAAAATACACGATATACATAAGGATTGTCAGGCTGTCCGACCTCTTTGACCTCAGTCAAATTAAGGATAGGCAGGCTCTGTTTGAGATTTTGATAATAATCCACAGTGATGGTACCAGTGACTTTCACCCAAGTATTGTCCTTGAAGGTTTGGTCACTTCCTGTCGTTGCCAGTCCGTAAACACCTGAATCGGCGATACAGTGGATAATTCCGAAACGGAAGATGAACTGATAACCCTTGGTTTGTGGGTCATTGTAGACAAAACCGGTATAGGTGACCTTCTTGCCCACAAAATCGTTAGGATAGAGGTAGATGAGCTCCATGACTTCCATGTAATTTTCCGTGGTAATCTGGATGGTCTCACGTCCCTTGTACTTGGCGAGCTCTCTGGTCATTTCCTTCTCATAAGCTGAGGAGGTGAAGTAGGAGCTGGTGTCTGGCTTCAAGTACTGAATAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //