Array 1 9065-8701 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP071813.1 Bacillus mycoides strain JAS15/1 plasmid pl208, complete sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	================================	===================================	==================
      9064	    32	 100.0	    34	................................	TCTTCAGTCTCCTTTACTTCTGCTAATAGTTTAG 	
      8998	    32	  90.6	    35	............A.T......G..........	ATATTGAACCAACCTCATCAAGTGAGATGATAAAG	
      8931	    32	  90.6	    34	..............G...A..G..........	GCACAGCAAGGCACAACTAGTTGGTAATGTTGTA 	
      8865	    32	  93.8	    34	...........C.........G..........	TCTTTCTTCATTCGGAAACGTTCTACTGTTACAG 	
      8799	    32	  96.9	    35	..............G.................	TTCCATATGGCTATATTGACGATCTTCGCGCTCTT	
      8732	    32	  87.5	     0	........C...A....G.T............	|                                  	
==========	======	======	======	================================	===================================	==================
         6	    32	  93.2	    35	GTCGCACCTCTTGTAGGTGCGTGGATTGAAAT	                                   	       

# Left flank :   ATCCGATTGACATTACTAGTATGCAGATTACGAAAAGTGTAAATTCTGAGCCAGGGAAGGATAAAGGTTCAGATACGATGGGGATGAAGCATCGTGTTGATTTTGGAGTCTATGTTTTTTATGGCAGTATTAATACACAATTAGCAGAAAAGACAGGTTTTACTAACGAGGATGCGGAAAAGATTAAAAATGCACTTGTTACATTGTTTGAAAATGATGCGTCAGCAGCACGTCCTGAAGGAAGTATAGAAGTACATAAAGTTTGTTGGTGGGAGCATAATTCAAAACTTGGTCAGTACTCTTCGGCAAACGTGCACCGTTTACTGGACATTAAGCGGAATATTGACGAACCAAAAACAATTAATGACTATAACATTTTGGTACATGAATTAGATAGCTTAAAAGTTGCGATTATTGATGGACTGTAATGAAGAAAACATTAGAATGATTGAAGGAAAGCGTATTTATTAAAAAGCTAATCAACCATTTATTAAAGAAAA
# Right flank :  TCAACTTTCCTGCTAGAACTCTTTTCCATGCGAAGGTCGAATATATTGGTGTAAAAGAATCAATTGATTTAGAAAGTCCTTTAATTTTTTAGGTGCGAACGTATAGTACACATGAAATCCCTAGTACATTCGCACCTGAATTTTCATAATTTGTGATTAAAATTTATGATTTTCTATACAAATTTCTTTATTAAATAAATAACTTGCATATTTTTGAACAGAATTAACGCATTTGTGTATGATTTTGAACACAAATCGGGGTCGCACCTCTTATAGGTGCGTGGATTGAAATCATGTGCATATTGAACAATAATGTCTTGGGTAACGTCGCACCTCTTTTAGGTGCGTGGATTGAAATTTTAATTGATGTGTCTATGATATTGGTAAAATAGGTCGCACCTCCTGTAGGTGCGTGGATTGAAATTAATAAAGCTAAGTAGGTTAAGGTGCTGTAAGCTCGTCGTACCTCTTGTGGGTACGTGGATTGAAATCTGGATCGT

# Questionable array : NO	 Score: 6.83
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.66, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.41,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCACCTCTTGTAGGTGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     F [10,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTCGCACCTCATATAGGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-2.50,-2.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [5-6] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [63.3-76.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.74,9.27   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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