Array 1 1043313-1039223 **** Predicted by CRISPRDetect 2.4 *** >NZ_UGVC01000001.1 Psychrobacter phenylpyruvicus strain NCTC10526, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 1043312 33 100.0 34 ................................. TAGCCAGCTCTGAAAAGGACTCAGGAGACACTAT 1043245 33 100.0 34 ................................. ATGAAGCTTTAACTGGCTCAAGCCAGCAGCAGGC 1043178 33 100.0 34 ................................. TCTAATGATATGCGTAGCCACGCGTTGTCCGCCG 1043111 33 100.0 33 ................................. GGACTACTATCGCTTATCTTGCGACAGCACGAG 1043045 33 100.0 35 ................................. ATATCTTTCTCCTCATACAAAGTAACATCTTTAGG 1042977 33 100.0 34 ................................. AGCCCCAGTATGATAGCCTCCAACAAAGCATCTT 1042910 33 100.0 34 ................................. ATCGTCCATAAACCTGTGGTTTAGCCAAAAATTT 1042843 33 100.0 33 ................................. CAACAAAGAGGATGTTACACAAGAAGCGTACGC 1042777 33 100.0 34 ................................. ATCACTAAGTGCTCAAGCTCAGCTAAGCTTTGAG 1042710 33 100.0 34 ................................. TTAACGCAAACATAACTTTATCCTCATTTGGTTG 1042643 33 100.0 34 ................................. ATCATTGTGTGTATTATAATAATATGTGTATTAT 1042576 33 100.0 32 ................................. AATTCAACCATACTGGTTGCAATTTAGTGAAA 1042511 33 100.0 33 ................................. TCATTTCAAGCTGACCCTACCGTTAGGATTGTC 1042445 33 100.0 34 ................................. CATGCATAGCATGCATGCATAGGTGTTTGACACT 1042378 33 100.0 33 ................................. TAGCAATTATGTCGCCTTATATCCACCCCCTGA 1042312 33 100.0 33 ................................. TTCGTTGGTAGAGCAAGCTCCGTCATAGCTGCT 1042246 33 100.0 33 ................................. TGCTATATCGTATTCGCAAGCATGGTATAGCCC 1042180 33 100.0 34 ................................. GTTATCATCACTCGCGCAGGCGGTGACATCTCGC 1042113 33 100.0 32 ................................. CTGGCAACCTGTAGGCCTTTACAGGCCATACA 1042048 33 100.0 32 ................................. TTTGATTTGAGTCTTTACAGCGTCCATATCGT 1041983 33 100.0 33 ................................. TAGCAGAGCAAAGCACTGTTAATCATATTGAGG 1041917 33 100.0 35 ................................. CCTTGAAAAATAACCCCATCTTCTTTGCACTACGG 1041849 33 100.0 34 ................................. TTTTTGGATGTTAGCGACAATACCAGCGGCTTGT 1041782 33 100.0 32 ................................. ATTGAACCTTGAATGGCCACCAACAGCAGCAG 1041717 33 100.0 34 ................................. AGTACGGATCACAAGATGATGACGAGCCGATCCC 1041650 33 100.0 32 ................................. CAAATGGCCATATAATCAAACCGCTGCATAAA 1041585 33 100.0 33 ................................. AAGGGTTATTTTAAGTTTTTTTTGGGCTTTGAG 1041519 33 100.0 32 ................................. GGACACCTTAAAAGAGTTAGCAGACAAGATTA 1041454 33 100.0 34 ................................. TAGTCCAGTCTATTGGGCTAGTTTCCACTAGGGA 1041387 33 100.0 32 ................................. TTCTTGGACGTGAGCTAGTATGTAAATACGAG 1041322 33 100.0 31 ................................. TTACCGCTGCCTTTCGGTTTTGTGCCATCCT 1041258 33 100.0 34 ................................. AACAACAGTCGAACAACAGATAGCGAAAACCGAA 1041191 33 100.0 34 ................................. GTTGAACTCGGCTTGCACTGTATCAATGCGGGTC 1041124 33 100.0 33 ................................. CTTGTCCTGCTCCACAAGCTTATCCCGTAGAGC 1041058 33 100.0 34 ................................. ATCCTTAAAACCCTTAACATTCAGCTGTTGCATT 1040991 33 100.0 32 ................................. TTAGTTAAGCTTGCTAATTTTTTGCGTACTAA 1040926 33 100.0 35 ................................. CTCTTTGGTCATACCGATTTGGCGTATTCTGCCGT 1040858 33 100.0 33 ................................. AAAGCCATTTACAAGACTAAAATAAGCGACATA 1040792 33 100.0 34 ................................. GTACCTTTGTTTGTATTGCCAGTATGGTAGATTT 1040725 33 100.0 33 ................................. GTAACGTGCCTTTAATTCATCGTTGAGCATTAT 1040659 33 100.0 32 ................................. AGATGCTGACTGGAGTTACGGCATAACCCCAT 1040594 33 100.0 34 ................................. TCCTAATGGCTGACTCGTAAAAGTCAGCTCTAGG 1040527 33 100.0 34 ................................. ATCATTTGACTTTAGGTAGTCTTTGGCTTTAGCG 1040460 33 100.0 36 ................................. ACCAACATCATCATGTATATAAACGTTGCAATCATC 1040391 33 100.0 34 ................................. AAAGTAGAAGTAACCTGATTTACTATCGCTATCT 1040324 33 100.0 33 ................................. GTGTGAGATAATTTGAAGCTCTAAAACCTCGTG 1040258 33 100.0 36 ................................. ATCGTTGAGCGTGATAGGCATTGGTATGTCGCCATA 1040189 33 100.0 35 ................................. GGACGTTACAAACGAAACCGGCGTCGGCGTTGAAT 1040121 33 100.0 34 ................................. AGTCGAACCAACAAGCCGGCCGCGAACTGGGCAA 1040054 33 100.0 36 ................................. CATACTGCCTCATAGCCTGCTGCTGCATCTGTTGCG 1039985 33 100.0 33 ................................. TGACTCTCTTATTTTTTTAGTAAGCGGCGGAAT 1039919 33 100.0 34 ................................. ATCTTGCTATCGCCCATCACACCGTCACGATATG 1039852 33 100.0 33 ................................. GGCGCACACGACAACAGTAATCGTGTCGCATAT 1039786 33 100.0 32 ................................. TTAGATGCTGAGGGTACTTTAGATGAGGCTTA 1039721 33 100.0 33 ................................. TCTTCATCAACAGTGTAAGCAGCACCAAACTCT 1039655 33 100.0 35 ................................. AGCTACATCAGATAGCGCCATACCGATTTGGTCAG 1039587 33 100.0 33 ................................. CAACCTGTAGTTGGGGTTTCTTTAATATCAGTT 1039521 33 100.0 33 ................................. TCTAAGCTGTGGTTGCTTTTTTAGCATCTGCTA 1039455 33 100.0 35 ................................. GTAGTAATCAGCTTCAATCTCGTTAAACTTATAGC 1039387 33 100.0 33 ................................. AAACATAGCTTTTTCACAAGAGTCCGGCTAGGG 1039321 33 93.9 33 ......T..............T........... TAGCAAAGCTTGCACGTAAGCAAAAAACTACTT 1039255 33 87.9 0 ...A..T..........A...A........... | ========== ====== ====== ====== ================================= ==================================== ================== 62 33 99.7 34 TTCGCACCCAATCACGGGTGCGTGGATTGAAAC # Left flank : CATGCGCGTCCACACATAGGTGTATTTTTGTCGTGTTTCCGCCACGACTGAGTCCAATTGCTCGCTCTTTACCACGCCGAGCTCCACTTGCATGTTGATGACACCGTACATAACTTCCGTCAATGAATACCCATTCTTTATCAGTTTGTGTTCGTAGGTCAAAAAAAAATTCTGCCATAGCCCTTTTTTAGACCATCGATTAAAGCGGTTATAAGCGGTTTTCCATGAACCTAGTTCGGTAGGTATGTCTCGCCATGGAGCACCTGTTCTTAGTTTCCAAAGTATGGCTTCCATTACGGTGCGGTCATTCTTCCATTGATGGCAACCGTGAGCCTTCATTGTTGTTTGTAGTTGTTCCCATATGTTGTCAGTTATTACTGTTCTCGCCATGGCTTGAGTTTCCCTATATTTTGTTGATATATAGGATTAAAATAAGGCTTTACTGTATTTTTCAAATTAGGGACACGCCCTAGTAATTGCAAGAGTTGCAATGTGGGTAT # Right flank : ATAAGGAAAAATGAAATGAAAATGAAAATATATTGTAGTAAGTTCGGTAAGTTGGTTGAAGCTCATCCGTTTGGTGGTGGCGAGTTAATACATTTAGCGAACTGGATTGATGACTTGAAATGTGACGTGAAAACAAGTGCTGTATTCGATCAAGGCTTACCGACGCTTATACTTACTAAGGGCGACGATGTAATAACTTTAAAGCCGAACCAGTGGTTGGTACGTGAAGATGAAAATGAATTCAAAGTAGTCAGTGCGGAACAGTTCCCTAATTTATACACGCTACACCAACCGACAGAAGGCGAGTGATATGGATGTTCAAAAATCAAAGTCATTACTATCGCATAGAGGGCCTATGAGCAACGTTTAAAATTGCACACCAATTTTGGCTGTGCAAGGGAAATCCTTTAAATAGAACTTCCAAAGCCGATAGCTTGTAGAATTTGTTCCGAGAAACAATTGCCTCTTATATTGCAGAAAAAAATTATGTATGTTACTCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCGCACCCAATCACGGGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.70,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : NA // Array 2 1044689-1044192 **** Predicted by CRISPRDetect 2.4 *** >NZ_UGVC01000001.1 Psychrobacter phenylpyruvicus strain NCTC10526, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 1044688 33 100.0 32 ................................. TAGCCCACCTATGACACGCAGCGATCGCTGTG 1044623 33 100.0 33 ................................. AATCTCTTTGGTGACGCTCTCAACAGTAGGCTC 1044557 33 100.0 32 ................................. TATATAAACCCAGTCACCTCTTGATAGGGTGT 1044492 33 100.0 35 ................................. ATCTGAGACAGGTAAGGTTGCTTACAAGATCAGTG 1044424 33 100.0 33 ................................. TTTGTGGGGTTGGGTTGTGAGCTATACCATGCT 1044358 33 100.0 34 ................................. CACGTAACAGTAGTTGCTACTGATAGGTTTGCAA 1044291 33 100.0 34 ................................. ATTAACGCCTTGTTCAAGTTGTCCGCCGCATAGG 1044224 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= =================================== ================== 8 33 100.0 33 TTCGCACCCAATCACGGGTGCGTGGATTGAAAC # Left flank : GGTGCCAAAAGATTGAGACAAATCGCCAAAAACTGTCTTAATTATGGACAACGTGTACAGTTTTCAGTATTTGAAATAGAAGTAAATCCTGCGCAATGGACAACTCTTAAAGCAACGCTAGAAAAGATTATCGATCCAGAAACAGACAGTTTACGCTATTATTATCTTGGTAAAAACTGGCAACGTAGAGTCGAGCATATAGGCGCAAAACCTGTACTGGACTTAAATGATATGCTTTTGTTCTAAACTAACCCAATTTTTTTATTAAAATTTTTTATAATGGTGGCTGTTATAAGGTCACTGCGAACCTATAGCGTACATAAAATCCCTGGGATATTCGCAATTAAGTCGCAAATTATTTAACAACTTGATTTTATTAACTTTATTTTTTAACTTTAGCGGTTTGGTAACTAAGCTAGTTACCAAATCTTGCCCTATGATAGTGACTCGCAAATTTAAAGGTTTTTTTTCAACCTAATCTGCAAGTTAACATATGGGCT # Right flank : TTTGTTAGGGCGTGTCCTCAATTTAACCTACAGTGAATAATAGTACAAGCTAGGTAAAGCATAGATTTAAAATTGCGTGCTAGCTTTTCATAGCGTGTTGCTATACTGCGAAAATGCTTTAATCGAGCGAACATATTTTCAACTAGATGGCGTAATTTATAAAGGTAACTGTCAAACTCTGGGTTAGGTTGTTTCGTATTTTTTCTTCTAGGAATAACCGCTCTCATGCCATGTTCTATCGCTTTATCTCTGATTTTCTGCGAATCGTATCCTTTATCAGCTATAAAATATTCTGCCTGTTCAATCACTTCTATTAGGTCGTTTGCAACTTGACTGTCGTGCACTTCACCCCCAGTAATTTTAAAATCGATCGGATTTCCATGCGCGTCCACACATAGGTGTATTTTTGTCGTGTTTCCGCCACGACTGAGTCCAATTGCTCGCTCTTTACCACGCCGAGCTCCACTTGCATGTTGATGACACCGTACATAACTTCCGTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCGCACCCAATCACGGGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.70,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : NA //