Array 1 22314-20244 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABVBY010000053.1 Acinetobacter bereziniae strain KCJ3K359 NODE_53_length_22625_cov_9.343853, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 22313 28 100.0 32 ............................ TAAGTTCAATGCCCGGGGTACTCCTTTCAATG 22253 28 100.0 32 ............................ ATCCTTTTCGAGCGAGCGCACAACCAGTACCA 22193 28 100.0 32 ............................ ATGAACCGATCGAAAAGAGTAACTGTAGTAAT 22133 28 100.0 33 ............................ ATTGCTTCACCTACCTCACCAACAAAGTTTTCA 22072 28 100.0 32 ............................ TAAATTGGCTATGCATTATATTCACATTTCTC 22012 28 100.0 32 ............................ CGCAGGGTCACCAGTTGAGAAACGAGTGGGAT 21952 28 100.0 32 ............................ AAAAATGGCGTTTGAATCCGCAAATGTTTGAT 21892 28 100.0 32 ............................ TACGACTTTGTATGTAAATGATGATGAAACAC 21832 28 100.0 32 ............................ GTAATGCAGTCATTACGCCTTTCTAGTCTTAA 21772 28 100.0 32 ............................ AATTTGTCCAACCCGGTACGTTAATTGGTTTT 21712 28 100.0 32 ............................ AAATGCTTGGTAATGGTGCTGTGACTGGTGAT 21652 28 100.0 32 ............................ ATTAAACCAATGGTGATTATCAAGACTGCGAA 21592 28 100.0 32 ............................ TTTAATACTCTAATTGCCTTTTCGACTTCATA 21532 28 100.0 32 ............................ TTGAACACCAACAAAGAGAGGTAATTCATCAA 21472 28 100.0 32 ............................ AACCCTTCAAAATCAGCAATTAAATACATACT 21412 28 100.0 32 ............................ TTAATCTGAACGTAAGGTTCATAGGCTGAATC 21352 28 100.0 32 ............................ ATAAGGACGTGTGATGTGATAATGACAACCGA 21292 28 100.0 32 ............................ TAATGTTGTCAATAGCCGTACTTTTAGCGGTT 21232 28 100.0 32 ............................ TTGAGCAATTTTTTCGGCTTGCGCATCGTCAT 21172 28 100.0 32 ............................ AGAATCTGGTCCAGATGTTTTCGCTCATTTTA 21112 28 100.0 32 ............................ AGAATCTGGTCCAGATGTTTTCGCTCATTTTA 21052 28 100.0 32 ............................ TGTGTCCGCAACCAGTGTTTCACGGATAATCG 20992 28 100.0 32 ............................ GACAGTAAAAGTTAAACCCTTGCCATTTATGC 20932 28 100.0 32 ............................ TAAAGAGTGCTTAACTCGATATGATGATTTTT 20872 28 100.0 32 ............................ AGTAAAACAGGGTGATTTCTCACCCTAAAATT 20812 28 100.0 32 ............................ TAATACACCCATTGGAAGATTGACTTCCTCTG 20752 28 100.0 32 ............................ AATGCAGGGGGTAGACCATGTCTCCAGAACAA 20692 28 100.0 32 ............................ ATAGGCACGTTGAACAATTGCAGATTCAATTC 20632 28 100.0 32 ............................ AGAGTAAAAACAATGAAGCGGATAATGCACAA 20572 28 100.0 32 ............................ TTATCAAGATTTTCAATATTCTTGCAGGTTTT 20512 28 100.0 32 ............................ AATCAACCATTAAAAAGGTTGTAAAAGATATG 20452 28 100.0 32 ............................ AATAGCACAGGCAATTATACAAACTGAAAGTG 20392 28 100.0 33 ............................ ATTTACATAGTTCAGCTTAGTGATTAATTGGTA 20331 28 100.0 32 ............................ TACCAATATTTGGGATGATGGTACATTTACTT 20271 28 96.4 0 .....................C...... | ========== ====== ====== ====== ============================ ================================= ================== 35 28 99.9 32 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : AAATTAAATTTTAAATATTTGATAAATAAATTATTTTATATGAGGTATGTCGTATGATTCTGAGGAGTGAATCTATTAGAGTTTGTATTATATACTGCTATAACTTGTTGCTGATGAGGCAAAAGGGAACAATTTTGGGAAATATGCTTTTAATAGAATTACGATTATTCAAATATTTTAACCCAATATTTTTTTACTCTTTAACAACTGAATAAAATCAATAAGTTATATTGGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTACCACTTTATTTTTTGATCTAAAATTAT # Right flank : AATTGTTAAACCTCTCTGATGATTTTAAAAATTTATAGTTGTATAAATTGTTTATTTTATAGCAATAAAAAAAGCCCACTTGAATGAAGTGGGCTTTTAGAATTTGGCTCTCCAACCTGGGCTCGAACCAGGGACCTGCGGATTAACAGTCCGTCGCTCTACCGACTGAGCTATTGGAGAATCTGCATGCGATTATAAGGATATATCACGAGTGGTCAAGCCTTTGATGTCATCTTTTCTTCATTTTTGACTTGTATGCTTTTTATTTAAACAAATAAGATCAAAATTAAAAAAATGGATTTGAGTGGTTGCAAAGCGAGAGCTGACTTGTTAGATTAAAAACATAAAGAGCGTTTAAGTTTGACTTAAACCGTGTGGATTTAACCAACTTGCCAGCACTAAAATGGCTAAATAGGAGACAGCGCGATGACGACGCTAACTATTTCTCAAATTTTTGAAAAATTTTCTTTTTATCAAGAAAACTACCTTTCTATCCTGCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [83.3-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 2619-188 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABVBY010000338.1 Acinetobacter bereziniae strain KCJ3K359 NODE_338_length_2731_cov_13.365591, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2618 28 100.0 32 ............................ ATTAACAATTATCGATACTGATGAAAATAAAA 2558 28 100.0 32 ............................ GGTTTCGCCCTGGCTAAACAATAATGATATAA 2498 28 100.0 32 ............................ GCTAGGGCATCCAGTGGGAGGCTTATCGCAAT 2438 28 100.0 32 ............................ ATGTATTCATAACTACCTCAAGTCGCATCTAA 2378 28 100.0 32 ............................ AACACCAATTTTGTTGCGAAAGCGTTGAAACC 2318 28 100.0 32 ............................ TGTTAAGCGAGGATAATCTACGACCTGAATTT 2258 28 100.0 32 ............................ ACAGTTTCAAAAGCGCACTGAATGAATTCTTG 2198 28 100.0 32 ............................ ACCAACCGACGGTTGTAAAAACGGTGAAGCAT 2138 28 100.0 32 ............................ TATTAATCAATTGCTTATTAAGTTCAATGCAT 2078 28 100.0 32 ............................ TAAGTTTTGACTTTTTTTAATGCGTAATATGA 2018 28 100.0 32 ............................ AAAGACATTGTAATCTACAAGTCGGAACGTTT 1958 28 100.0 32 ............................ TGTAGGGGTTAAGACTTCGATTTTATCTTGAT 1898 28 100.0 32 ............................ CAAATGATTATGTGTTTACAGTAAAAGCTGAA 1838 28 100.0 33 ............................ ATTTCGATCAGTTACAGGTTCACTCTGCATACA 1777 28 100.0 32 ............................ TATCCATTGGCACTATATCAACGTAATCTATA 1717 28 100.0 32 ............................ TGACACATATGACCCCGAATTGCCAAGTTTAG 1657 28 100.0 32 ............................ AGCAACAGGATCAATGATAACCGCATTAGCAC 1597 28 100.0 32 ............................ TAGTGGTGTTGGTATTTCTTACAGAGAAGTAG 1537 28 100.0 32 ............................ ATATAGCCGAATGCTGTAATACCAAACTTGGC 1477 28 100.0 32 ............................ TGTTTCTAAAATTTGTAATGATTCACAAATGA 1417 28 100.0 32 ............................ TTAAACAATGGAAAAACCATTTATCACCTCAT 1357 28 100.0 32 ............................ GTGAGTGTCGTTAATTCGGTCTACAATCTCAT 1297 28 100.0 32 ............................ AAACACTCCTTATCCTGATAATGTAACTCCAC 1237 28 100.0 32 ............................ ATCCTGCACCTTCTACAATTCCATAGATAACT 1177 28 100.0 32 ............................ GATCTCGTTTGATTTTGTGGTTTCTTTCATAA 1117 28 100.0 32 ............................ TTTCAGACGATGTTCTCTTGAACCTGATTTCA 1057 28 100.0 32 ............................ ACAGCACCAGTTTGCAACATCATTAACTGCCA 997 28 100.0 32 ............................ TTGTGAACAGATCTAATATTGTAGTAGCTGCG 937 28 100.0 33 ............................ AACCACGCCGTTTTCATTGAAATCGCCATAGCT 876 28 100.0 32 ............................ ATATCTGCTGTGCTAACTGTGCTTTCTCGTTG 816 28 100.0 32 ............................ AATATAATATCCTGTCGTGAAATTGACATGAT 756 28 100.0 32 ............................ TTGTGAACAGATCTAATATTGTAGTAGCTGCG 696 28 100.0 33 ............................ AACCACGCCGTTTTCATTGAAATCGCCATAGCT 635 28 100.0 32 ............................ CAGCGATGCCAATGCTCTACAAATCGGATTAA 575 28 100.0 33 ............................ CGATGCTAGGTGTGGATTGGGGGGTTTAGTACA 514 28 100.0 32 ............................ GCTAATTTGCATAAGGTTTTATTTATCACTGA 454 28 100.0 32 ............................ GAAGGGGCTAACTTTTTAAGCTGCATTAGCAC 394 28 100.0 32 ............................ AGACTCTAAATCATGCGGTTGAACAGGCTTTG 334 28 100.0 32 ............................ ATTGTGGTAAAAATTAACTTAAATTTGATTTT 274 28 92.9 32 ...........C......T......... ATGTCAACACATGTATTACTGGAAGTCTAAGA 214 27 78.6 0 ...............A..C.T..-.T.T | ========== ====== ====== ====== ============================ ================================= ================== 41 28 99.3 32 GTTCACTACCGTATAGGTAGCTTAGAAA # Left flank : TTTAACAACTGAATAAAATCAATAAGTTATAATTGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATTATTTTATTTTTTGTTTTAAAATTAT # Right flank : TGTGCTAAATAGAATGTTTATTTTTACTTGATTATTTAGATAATATTTATAAAAGTCGTTAATCGATTTTTATTCCGAAACCCCTTAGAAAACGGTTTTGTTTAACAGGATGATCAGCTTTTTTTATTTATCTCAATTTCAATAAATGGGTTAGGCAAGATCTTTTATATTCAAAGTTGATAATAGAT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGTATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: R [matched GTTCACTACCGTATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-86.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 9502-6651 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABVBY010000079.1 Acinetobacter bereziniae strain KCJ3K359 NODE_79_length_18161_cov_8.687923, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 9501 28 100.0 32 ............................ TTTAAACTCAACCTCAGCACGACACCAAGGAC 9441 28 100.0 32 ............................ ACAAAAGCAGTATTCACAACAACCAGTTCAAA 9381 28 100.0 32 ............................ AAACCGTATGACACGCAAATTAGCGCAAATTA 9321 28 100.0 32 ............................ GTTTAGCCACTTTTGACAATCAGACTGCTTGA 9261 28 100.0 32 ............................ GACATAGAGCCTTTGATATATATGGAATTACA 9201 28 100.0 32 ............................ TTTTACTTTAATATTTCCAGTGATTCTTTTTT 9141 28 100.0 32 ............................ TCTAATCATGAAACTTGGTGCGAAATTGCCAT 9081 28 100.0 32 ............................ TGATTACTAAAAAAAGGAGCCTGGATAAGGCT 9021 28 100.0 32 ............................ TACTGGATGCCCTAGCGGTTATACAAGTGGTT 8961 28 100.0 32 ............................ TAACTTTACCCCTAATGTTGTCAATGCTCGTA 8901 28 100.0 32 ............................ TTAATGTGCCCGGCTGGACAAACTGGAACGTA 8841 28 100.0 32 ............................ AAGTTTTTTCGTGAAGTTCTTGTTGTTCAATT 8781 28 100.0 32 ............................ GGCTTCGCCCTGGCTAAACAATAATGATATAA 8721 28 100.0 32 ............................ GTCGCCATTTGTATCAACGTTTGGTTTGGGTT 8661 28 100.0 32 ............................ AGCTTCAAGCACCATGTACTTTCCTGCATTTT 8601 28 100.0 32 ............................ AGTTGAAGCAAAATTATGTTGATCGAGTTTCA 8541 28 100.0 32 ............................ TGCTGATGCGCTTGCATTTATCAAGCTATATA 8481 28 100.0 32 ............................ TAAACGTCTTGAATTTACACATGCATCCGTAA 8421 28 100.0 32 ............................ TTTAGACGTTCTTTTATCACCATCGACATATT 8361 28 100.0 32 ............................ AGAATCTGGAAGTATTTTAGGGAATTTTGGAA 8301 28 100.0 32 ............................ ATCAGCAATTTGCAGACAGCAGTAATATTGTT 8241 28 100.0 32 ............................ TTGTTATTTACAATTTTGTACTCTTCTGGAAC 8181 28 100.0 32 ............................ TAACAAGCCTTATGATCAGGAAGATATTCAGA 8121 28 100.0 32 ............................ AAGGCGCTTAAAGAGCAAAGACAATTTTCTTT 8061 28 100.0 32 ............................ AATGTGATTTGTAATTTATATCGTATTACATA 8001 28 100.0 32 ............................ TATAGAGCTATTGAACACGGCGATACATTCCA 7941 28 100.0 33 ............................ TGACCGTTTAATTTTTTAGCCTTCTCGGCTTCA 7880 28 100.0 32 ............................ TTGAACGGATTTAACTTTAGTTGGATTATTGC 7820 28 100.0 32 ............................ TTTATACGGCATCCAATACCCATCCAACCAAT 7760 28 100.0 32 ............................ TTAACGGCGAGATCGACGAGACTGTACGCTTC 7700 28 100.0 32 ............................ TCATCAATGATCACTTTACCTTGTAAACCGCG 7640 28 100.0 32 ............................ TTGAACCAAACCGTAAATAGCTGCGCCTGCTA 7580 28 100.0 32 ............................ TGCTGCGAATACAAATGTAGGCGTCATAGCAA 7520 28 100.0 33 ............................ TAGCAACTGGCAACCAAAATCTAAAGCATGAAT 7459 28 100.0 33 ............................ ATCCACTCCCATTCGATAGATGCTGATCTGCCT 7398 28 100.0 32 ............................ AAAGCTTCTGTGTCTTCACAAGGCGTTATTAC 7338 28 100.0 32 ............................ AATTAAGGGAATAAGTAGGATAGCAAAGAGTT 7278 28 100.0 32 ............................ CAAATCAAACATTAGTACCTGTCTCAGACACA 7218 28 100.0 32 ............................ TGTCTGAAGCAATAAGTAGTTATATTCAGAAT 7158 28 89.3 32 .......A..G......T.......... TTCTCAAATTCAATCCATTTGTTATTTAGGGC 7098 28 89.3 32 .......A..G......T.......... ATATCGGGAACGTACCTGAATTTGAGCTTGAA 7038 28 89.3 32 .......A..G......T.......... AGTAAAACTATTGGTAATTGAACTGGACAGCG 6978 28 89.3 32 .......A..G......T.......... AGTAAAACTATTGGTAATTGAACTGGACAGCG 6918 28 89.3 32 .......A..G......T.......... TAACTTGAAATCAGAATTGCTTGCAAAGTAGT 6858 28 89.3 32 .......A..G......T.......... ATCCTCTTCGTAAATATCAAAACCAATTCTTA 6798 28 89.3 32 .......A..G......T.......... TGCAGAAGACTATATAGACAAAACTGTCGATA 6738 28 89.3 32 .......A..G......T.......... TTGCTAACGTTTTGAATTGCCGAAAAGTCTGA 6678 28 67.9 0 .......A..GT...AATCC....A... | ========== ====== ====== ====== ============================ ================================= ================== 48 28 97.5 32 GTTCACTGCCACATAGGCAGCTTAGAAA # Left flank : TTGAATATAAGAAAATGGTTAGATCGGTTTCCTGATTATGTGCATATCACAGGTGTACGTCCTGTTCCTGAAAAAGTAACGGCTTACGCAGTTTATAAACGTAAGCAAGTTAAAACCAACGCTGAACGTTTGGCTCGCCATCGAGTCAAAAGAGGAGATATTGGCTTTGATGAAGCATTGAGCCGTTATCTTCAAGTGGTGACAACAACTGATTTACCTTATGTCCAAATGCTAAGTTTAAGTACATCGGATGAACAAGATAAAAAGCGTTTTAAGCTATTTATAGAAAAGCAGATCACTGAAAAATCTGAAACTCAGGTTTTTAGAACATATGGGTTAAGTTCTGTGTCTACAGTACCCGAGTTTTAACCCAATATTTTTTCACTCTTTAACAGTCTAATTAAATCAATAAGTTATGGTGGTGGGTTGAAACTTTGGTCTTTTGTAGATTTTTAGTCTTAACTCACTGTTATAACTTTATTTTTTGTTTTAAAATTACT # Right flank : TATAAACGCCTTAACATCTTCGCTAAATTTAGGAAAGTACAAACGATATGGAATAATTTTTATAGTAAATAAAAGATGATAATTTAAATGATAATTATTTGCATTATTAATTGCATTTGAATATTTGGTAAAATACAATGTGCAACAATTCTTACACAATCCCTCCGTAATTTGAGTTGCGTATTAACATGAATAAACAATTAACACTTCAAGCACTATCTCTCTCCATACTCTCAGCAATGTCAATTTCAACATATGCAAACGAGACTTCAGAAGACTCTTCCAAGCTTAAAACGATCGTCGTTACAGCAAGTAGTCAGGCGGTCGATGTTAAAGAAGCACCAGCCAGTATTAGTGTGATTACCAGTGAAGATATAGAAAAACAACCGGTGGGTAGTCTTGGCGAGTTATTAAGTAAAGTACCTGGGGTTACTGGTGGAATTAGTCCTAGCAAAGAAGGCTCTAAAATTAAACTACGCGGTTTACCTGACAATTACACA # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCACATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCACATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [71.7-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //