Array 1 1404187-1404396 **** Predicted by CRISPRDetect 2.4 *** >NZ_VCMZ01000001.1 Acinetobacter pullicarnis strain S23 contig001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1404187 28 100.0 32 ............................ ACTAGACCTTTCAGAGCAGCGAACGCGAACAT 1404247 28 100.0 32 ............................ ATTCAGCAAAATAGTTTTAGGCTTTAGGCGGA 1404307 28 96.4 32 ...C........................ AGCCTTTGGGCGAAAGATGGAAATCTTTGGTG 1404367 28 89.3 0 ...C.......TA............... | A,T [1404390,1404393] ========== ====== ====== ====== ============================ ================================ ================== 4 28 96.4 32 GTTTACTGCCACGTAGGCAGCTTAGAAA # Left flank : TCTTTCTGACAAAGAGTTTGTTGTAAAGGCTTCATCGGTCCAAAGTATTGGTGTTGATAATCTCAATGCAATGAATCAGACGGGGCAACTGCCACAAGTTCAGCGCGAAAGACGGCAGGCGCAGGCGATTGGTGCCGCAACTCTTGTGCAGCCCAAAATCACAATCATCAACCAGACTTCTCAACCAGTTCAAGCTGAAAGTGAATGGGATGGGAATGAGTTGAAAGTGATTCTGACTGAAATGCAAAAACAGAATGAGGCTATGGTTGATCAGAAGATTGAAAAACGCTTTAGGATGTCTGGGCGTCAAGGTTGGTAAATAAACTTGATGGATAAGCCACCTCGGTGGCTTTTTAGTAACTCCGCTTTGCCCCAAGTTTTTATATTGAATATAATTGTTTGATTTTAAATGTATTATTATTTGGTGTGAAAACTTGGGTATTTTTAATAATGTTGTGGTACGTTGTTGAATACATTAAAATAGTTGCTTATATTTTACT # Right flank : AAAGCACCCTGGGGTGCAACACTAAACCGCCATCACGGCGGTTTTTTATTACCTGCACCTTTTAGCATTTTTCGTCACCGCAAGTATCTTAGTGTTTGCTTAATGTTTAATAGTGTTGTATAAAAAAAGAGCAACTTCAAGGAGTGAGCCATGATAGATAAAACTATAGATGTACTCGTATTATTGTTGTTCTTTTTATTAGCCACAACTATTTTATACCTAATAGGGCAATCAGTAGGCCATGATTTTACGGCCTTCAGGATTAGCTAAATAATAATCACATTATTTTAAACCAAAGCACCCTGGGGTGCTTTTTTGTTGTCTGCGCCGTGAAGCGGTTTTGCACAGCAAGTAAGCTCTCACGACAATAATTGGCGCACTTGATTGGTTGACTTCTTGACTTTTACAAATAAATCAAAATTGACGTCACAGTCGTTAGTGGTTATATTGTGTGGATAACCCTGTTATCAAAAGATCAGAGGGTGTTTTTGTCTAAGGAG # Questionable array : NO Score: 5.68 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTACTGCCACGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: F [matched GTTTACTGCCGCATAGGCAGCTTAGAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1751568-1749601 **** Predicted by CRISPRDetect 2.4 *** >NZ_VCMZ01000001.1 Acinetobacter pullicarnis strain S23 contig001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1751567 28 100.0 32 ............................ TTTCCGAATCCGCCTCGCCCCCGTCTTATTGT 1751507 28 100.0 32 ............................ AGTCGAATCTTTGGCATCATGACCTGCCATGG 1751447 28 100.0 32 ............................ TGTAGCATGTCCTAATTCATGTAATGCTGTCG 1751387 28 100.0 32 ............................ AACATCAATAGATTTTAAATATGACTTAATAG 1751327 28 100.0 32 ............................ AACACTTGAAAACACAATCACGGACACACTAT 1751267 28 100.0 32 ............................ TTCTTCCATAGTATGTGAGATTTCACCAACAA 1751207 28 100.0 32 ............................ ACTAAATTCATTCCATGTACGAAACATATCAT 1751147 28 100.0 32 ............................ ATAGGCTGACATAAACAAACCTTGCTGATTGC 1751087 28 100.0 32 ............................ GTGAAGCTTGATGCTATCTTGGACCCGATTAT 1751027 28 100.0 32 ............................ CTTCTGAAAAAATCTTTTAGCGTTTTGTAGCT 1750967 28 100.0 32 ............................ ACTGGAGCACGTTTACCGAGACTGTAAACAAG 1750907 28 100.0 32 ............................ TGTCAAAGTCTGTGCCAATCCTGACTGTAGGG 1750847 28 100.0 32 ............................ TCCTACAGAGTTTCCCGTGCACTTCGCAGAAG 1750787 28 100.0 32 ............................ ACTGATCCTGATTATTGGTGTTATTATCAATT 1750727 28 100.0 32 ............................ TTGCTCTGCAAGCTTGTTAACAAACTGCACCC 1750667 28 100.0 32 ............................ ATTAAAATCTTACGCCCAACATTTAAAGATAT 1750607 28 100.0 32 ............................ CAAAAAATACTATTGGTATTACTGAACTTAAA 1750547 28 100.0 32 ............................ ACTCAAATGCACCAGTTGCAAAAGTAATTGAA 1750487 28 100.0 32 ............................ GGTTGGATCGAACATAATGTAATTGATGGGGA 1750427 28 100.0 32 ............................ AGAAGATTTACTGAACAATCGAATGCTTGCAT 1750367 28 100.0 27 ............................ GAATTGCCCTAAAGACGACTTCAGATG 1750307 28 85.7 0 .......................GCC.T - Deletion [1750280] 1750284 24 85.7 32 ----........................ GTTACTGCTGACCGCATGGCGGAGCTTTTAAA 1750228 28 100.0 32 ............................ AATGACAATAATCGATGGCAATACGTTTAAGT 1750168 28 100.0 32 ............................ TGTAATTATTGGGTTCTTAATAACTGTATATT 1750108 28 100.0 32 ............................ AGCAAGTGGTGGGTTGAGTTGAGCGTAAACAC 1750048 28 100.0 32 ............................ TTTATTTAATGTTAGTTCCATATTCTCTTTCT 1749988 28 100.0 32 ............................ TAAACCAGTACCGCCCTTGTCTGTACCATCAT 1749928 28 100.0 32 ............................ TGTCTATTTGTTTTACTTGGAATTGTTATTCT 1749868 28 100.0 32 ............................ ATCATACAAAAAAGGTGAGAAGGTCGTGATAT 1749808 28 100.0 32 ............................ AACTCGTATATCAATATAATCACCACTTAATA 1749748 28 100.0 32 ............................ GAGCAATGAGCCTGCATACCAAGCTTTGCTTG 1749688 28 100.0 32 ............................ TCAGATCAACAACACCAGTATGATCATTTGCA 1749628 28 92.9 0 ..........................TC | ========== ====== ====== ====== ============================ ================================ ================== 34 28 98.9 31 GTTTGCCATCGCACTGATGGTTTAGAAG # Left flank : GTCGTTGGGCTAAAGCGCTTTATAAACAACTTGCTCAAGGCTTTAATTTCGAATTTAAACGTAATGAAGGGAAATTATCACATGACTCTTTAGCAGATACAGCGAACAGCTATTTAGACCACGGTAATTATATTGCCTATGGCTATGCAGCAGTGAGCCTCAATGGAATGGGAATTAGTTTTGCTTTACCAATTTTACATGGTAAGACACGGCGCGGAGGTTTGGTCTTCGATCTTGCAGATCTAGTTAAAGATGCATTTGTGATGCCGCAAGCTTTTATTTCAGCCAAGCTTCATCACAATCAAAAAGAATTTCGAATGCAACTCATTGAAATTTGCCAAGATCAGGATGTTTTAGATTACATGTTTAGCTTCATTTCTGAGCTATGTAATAAAATTAAGTAATATCAATCACTTAAAATTTTAGATTTTTTTGATCTAATTTCACTCTTTAACAACCTATGTTACTATTATCTAGAGTTTTTTTTATAAATCACTCTA # Right flank : ATTAACCACAATATTAATATTTACCGTCTCCTCATGGCCTAGCACAGATTTATCTACAACTAGGGCATGTGCTTAAAAACATTAAAAAGCAACGCCACTGCGTTGCTCATTTACAATCAATTCTTCAAGTCTATAGGCTTCGATTGAAGCACGCACGATCCTCTAAAATCGTTAAATGCGCCCTTCGCTTCTCTCTTTAAACGCTTTCAATCACGACAGCGAGACCTTGCCCCACACCAATACATAAGCTGATCACCGCATATTTTTTGCCACGGCGTTTTAATTCGCGTGCTACGGTTAAAGCCAAACGCGCACCCGAAGCACCGAGTGGATGTCCTAATGCAATCGCACCACCATTTGGATTCACCCGTGGATCATCAAAAGCTACATCCAAGCCTTTGAGGCAAGACAAGACTTGAGATGCAAACGCTTCATTGATTTCAATGATGTCCATATCATCCAAGCTAAGATTGGCTCGTTTCAAAGCCAGTTTAATCGCG # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.08, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGCCATCGCACTGATGGTTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTTGCCATCGCCCAGATGGTTTAGAAG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.80,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 2079969-2080539 **** Predicted by CRISPRDetect 2.4 *** >NZ_VCMZ01000001.1 Acinetobacter pullicarnis strain S23 contig001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2079969 28 100.0 32 ............................ AACGTATTATATAGCTTACAGCCGATTATATT 2080029 28 100.0 32 ............................ TATATGGAAGGCTTTGAAAGTATTGCATCCGA 2080089 28 100.0 32 ............................ GTATATAGTCATCAAATGCATTGTAAAGAAAT 2080149 28 100.0 32 ............................ AAGATCGTTATCGCGGTAGACTCTGACTTTAT 2080209 28 100.0 32 ............................ TAAAATAAAGGTAGTATGGAGTCCACTTGCAG 2080269 28 100.0 33 ............................ ACATAAAGCCCACAGAACCCGCGCCGTGGTGCT 2080330 28 100.0 33 ............................ AAGTAATGGGTTATCTACTGTATTGAATTTCAT 2080391 28 100.0 32 ............................ AACTCCAATGTTTGACTTGAATGTCACAGTAT 2080451 28 100.0 33 ............................ TAATAATAGTGATTGTAATGCATCCAATTGTTC 2080512 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 10 28 100.0 32 GTTCACTGCCACATAGGCAGCTTAGAAA # Left flank : AAACCGTCAACAATATCGTGCTAAATTTGCGCTTTTCCAAGCAGAATTGGGTCATCTACTACCACTTAAAAAGCCTGATGCGGGTTTTTATTACTGGCTCAAAGTGGATCATGATGAAAAATTTGCCAAGATGTTAATGGAAAAGGCGCATATTAAAGTGCTTCCGGGGCGCTATTTATCGCGTGATACCGCACAAGGCAATCCGGGTGAAAACCACGTACGTTTAGCCTTAGTTGCAGACATGACACAATGCGAACAAGTGGTTGAACGCTTAAAAGCCATTTTGTAATGCCGCAATAAAAATATGGCGACTGTTGATTCATGTCCTATTTTGAACATGAATCAACTTTGACAAACATTAACTTTTACCCCAATATTTAATGACTCTTTAACAACTCAATGAAATCAATAACTTATGGTATCGCTCAAAAACTTGGGGTAAAACCTATTTTTCAGGGTTAAACCATTGTTATTATTTGATTTATGGTTTAAATTCTATA # Right flank : AACTGTAATCTCGTAAACGCTTTATCTTTTCTTATAAAATGCGTATCTTGTTGGAAATTTAAGGGGTGCATCATGAAGAAAGTATTGTTATTGGCGGTCGTGATCGGACTGGTGGGCTGTGGTAAATCCAAAACTGAAAAACTAGAAACCAAAATAAAATTACTCACTGCCGAGCAGCAAAAATATCAAGAGATTCAAGAGAAACTCGCTCCACAATGTGATCAAGCCACACAACTTTATCAAGCAGCACTTAAAGCGCAAAAGCCTGATGCAACTGAATTGAAAGAGTCTAGTCGTGATATTTGTCTCGCAACCATTGCTGCCAAAAACAAAGTACTTGAAATACAAAACACCATCACAGAAAGTAAAATAAAAATTGCAGCGCTGGGCAAGTCATAATCAACTTATCATGATTACGGCTACACATCATTTTGGTATTCCACCGCAGAGCAGTGGAACCCGTGGTCACCTATTTACAGCTTTAATGATTACATCGAAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCACATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCACATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [78.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 4 2170825-2170972 **** Predicted by CRISPRDetect 2.4 *** >NZ_VCMZ01000001.1 Acinetobacter pullicarnis strain S23 contig001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2170825 28 100.0 32 ............................ GCTTGAAAAAGTTGTGAACGTTACTCTGCCTA 2170885 28 96.4 32 C........................... CCCAGCGCCATCTTTAATTGATTGGGTTAGTT 2170945 28 89.3 0 .......................CA..T | ========== ====== ====== ====== ============================ ================================ ================== 3 28 95.2 32 GTTCACTGCCACATAGGCAGCTTAGAAA # Left flank : GCCCTACAATTTAAAACAGAGAAATATCAAGTTCGTATTGATCAACTCTCCAATGGAAACTATCGCTATGCAGCTTGGGCGGCATCAAAGGCTCAGTCCAGCAAACCTGATCTGATCCTCAATAATGGTAGCGTTACCATGGATGGATCAGGCGGTAATCATTTTTATCGCTTTAAAAATGGTGCCTACCAATATACAGTTTATCGCTTTATCCTCGGTGCAGAAGACATAGACGTAGAACTGGTGGTTGAAAAGAATAGCAAAGAGATTCTTAAGCAAGCTGGTGAAATTTTGCCATGGGTGATTTTAAAATCGAATCAATAAAAAGGTGCTGAACGCATAATCATTTTGACAATCGCCCTTTTTTACCCCAATATTTAAAACACTCTTTAACAGCTCAATAAAATCAATGGTTTACAAACAACCTTAAAAACTTGGGGTTCTTGCTATTTTTTAAGTTAAATAGCTGTTATAAATAATTTTTTAGCTTTAAACTTACT # Right flank : TACAAAAAAGCCCCAGCAAATTGCTGGGGCTTTAACGACGTTTAAATCGCTCTTATTTGGGTTCGATTGGATTAAAGGGTGCGATCACATCGGCATTTTGTGCACGGTTACGCATAAAATGGTCCATCAATACAATTGCAAGCATGCCTTCCGCGATGGGTGTCGCTCGTACACCAACACAAGGATCATGACGACCTTTGGTCAGTACATCGGTATCCTCACCATCAATGTTAATGGTCTTGCCCGGTGTGGTAATACTCGCTGTTGGTTTCAAAGCAATCGCCACACGAATGGTTTGGCCTGAAGAAATCCCACCTAAAATCCCACCGGCATGATTGGCCAAGAAGCCATCACCGCTCAATTCATCACGGCTGCTGTGTCCAAATTGTTCAGCGACTGCAAAGCCATCCCCAATTTCAACACCTTTAACCGCATTAATACTCATCATGGCATGGGCAATATCGGCATCAAGACGATCGAATACCGGTTCACCCCAACCC # Questionable array : NO Score: 3.93 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCACATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: F [matched GTTCACTGCCACATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.90,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //