Array 1 2076330-2075168 **** Predicted by CRISPRDetect 2.4 *** >NZ_UGNW01000001.1 Legionella birminghamensis strain NCTC12437, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 2076329 32 100.0 35 ................................ TTTTGTAAATATTGGTATTCGAATCAAAAGAATTT 2076262 32 100.0 36 ................................ CCAGTTTTCAGTATCAAACTCGCTGGCTACACTAAT 2076194 32 100.0 36 ................................ ATTTTTAACTCCCCCCAGACTATAGATAACCATAAT 2076126 32 100.0 33 ................................ TGTAGCATCTGATAAAACCCTTACTTTGCCAGA 2076061 32 100.0 36 ................................ ATGTCATAGTGAATTAATATCATGAGTATATGCCAA 2075993 32 100.0 33 ................................ GCTACTCCTTAATCTCTTCTCTCATTTTAAGTA 2075928 32 100.0 34 ................................ AACGATGAAACTAGGGCGTTGCCCGTCTGAGGTT 2075862 32 100.0 33 ................................ AGTATCCGCTCAAAATAGAGTTAGATATTATTG 2075797 32 100.0 34 ................................ AAGTTAAAAATGCCTGAAGGTACCAAAGACCAGC 2075731 32 100.0 33 ................................ AAGAATGTGCCACAGAATAGTACTTTTTCAGGA 2075666 32 100.0 33 ................................ TTGTTCTGTCAGTGTCACGCTATATAAGTCGGC 2075601 32 100.0 33 ................................ TTTTTGCTTGAACAAATTAAGTGCTGCAGCTTG 2075536 32 100.0 34 ................................ AAATTTGGAACTCTGAATGTACCAACTCCACCAG 2075470 32 100.0 37 ................................ TAAAAAACCAATGGTATTTGCAAGACTATATCGAATA 2075401 32 100.0 34 ................................ ATTATAATGTACACCGTCATAATGAAAATCAAGG 2075335 32 100.0 36 ................................ AAGCTGTGGCGTGTTCTGCTGTTGCTCACCTAAAAG 2075267 32 100.0 36 ................................ GTTTAATTTTAACTTTACATTCGTGCCCATTATGTC 2075199 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 18 32 100.0 35 GTCGCGCCCCATGCGGGCGCGTGGATTGAAAC # Left flank : GGTGAAATAATGTTAGTGCTCATAACTTATGATGTAAATGTCACCTCAAAAGACGGACAAAGCCGCTTGCACAAAGTTGCAAAAATTTGTCTGGATTATGGAATGCGGGTACAGAACTCTGTTTTTGAGTGTGAAATTGATCCCGCACAATTTGCCCTGCTAAAAAGCAAATTACTCAGAACAATTAATCCTGAAGTGGATAGTTTGCGATTCTATTTTCTAGGAAAAAAGGGAAGGAAGAGGATTGAGCACGTAGGTGCAAAGCTTGTTCCCGACCCACTTCGGTCGCATCTGATTATATAGTTATCAGGAAGAAAATTTTTTCCGCTAAACTGTAGTAGTCAGAAAAATCCGGTTGGATTAGCGGTTCCTTTAGTAATTGATTTATTTAACTAATGTAAAAAACTCTTTAAAAATTTGACGCTTCTCTAAAAAAATCGCTTCGATTAACGGAATCAACGTGAATTCTACTTATTATTCAATATAATTAAAATGAGACA # Right flank : TTTTTGACATTGTATGTTCCGAGTGCCGGAACAACGTGGCGCCCCACGCGGGCTGAGGAATCCCCTCATTTTTTCATTCAAAAAAACGTACCTTATTAGGGTCAAAATGACTTTAAATAATGTCGTTTCCGCGTAGCGGAAATCCATCTTGCAAACAAAGTTAGGAATTATCTTGAGAAATAGGGTGGATACCACCGAATCCCCGCGGCTTTGACCGCGGGCCCACACGAAGCCAATTTAATGTTAAGCACACTTGTTTATGACTACCCGTTAAATCTTATTTTTTGGCAACATTCAAACTTGTTTGAGGACCATGCTACTCCAACAGGCATGGGCCCCGCGGTCAGTGCCGCGGGGATTCGGACGGGGAAAATATTGGTGTAGATAGCTATGGGCTGCGACCGCGGGCTAAGGATGTTTTATCAACCTCAGTTTCCGTTGTCTAAACAGGGGGATTTCGTTAATATCGCTAAAGAAAAATTACAAGAGACGATAAAATG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCATGCGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCGTGCGGGCGCGTGGGTTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.80,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [43.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //