Array 1 2076330-2075168 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_UGNW01000001.1 Legionella birminghamensis strain NCTC12437, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	================================	=====================================	==================
   2076329	    32	 100.0	    35	................................	TTTTGTAAATATTGGTATTCGAATCAAAAGAATTT  	
   2076262	    32	 100.0	    36	................................	CCAGTTTTCAGTATCAAACTCGCTGGCTACACTAAT 	
   2076194	    32	 100.0	    36	................................	ATTTTTAACTCCCCCCAGACTATAGATAACCATAAT 	
   2076126	    32	 100.0	    33	................................	TGTAGCATCTGATAAAACCCTTACTTTGCCAGA    	
   2076061	    32	 100.0	    36	................................	ATGTCATAGTGAATTAATATCATGAGTATATGCCAA 	
   2075993	    32	 100.0	    33	................................	GCTACTCCTTAATCTCTTCTCTCATTTTAAGTA    	
   2075928	    32	 100.0	    34	................................	AACGATGAAACTAGGGCGTTGCCCGTCTGAGGTT   	
   2075862	    32	 100.0	    33	................................	AGTATCCGCTCAAAATAGAGTTAGATATTATTG    	
   2075797	    32	 100.0	    34	................................	AAGTTAAAAATGCCTGAAGGTACCAAAGACCAGC   	
   2075731	    32	 100.0	    33	................................	AAGAATGTGCCACAGAATAGTACTTTTTCAGGA    	
   2075666	    32	 100.0	    33	................................	TTGTTCTGTCAGTGTCACGCTATATAAGTCGGC    	
   2075601	    32	 100.0	    33	................................	TTTTTGCTTGAACAAATTAAGTGCTGCAGCTTG    	
   2075536	    32	 100.0	    34	................................	AAATTTGGAACTCTGAATGTACCAACTCCACCAG   	
   2075470	    32	 100.0	    37	................................	TAAAAAACCAATGGTATTTGCAAGACTATATCGAATA	
   2075401	    32	 100.0	    34	................................	ATTATAATGTACACCGTCATAATGAAAATCAAGG   	
   2075335	    32	 100.0	    36	................................	AAGCTGTGGCGTGTTCTGCTGTTGCTCACCTAAAAG 	
   2075267	    32	 100.0	    36	................................	GTTTAATTTTAACTTTACATTCGTGCCCATTATGTC 	
   2075199	    32	 100.0	     0	................................	|                                    	
==========	======	======	======	================================	=====================================	==================
        18	    32	 100.0	    35	GTCGCGCCCCATGCGGGCGCGTGGATTGAAAC	                                     	       

# Left flank :   GGTGAAATAATGTTAGTGCTCATAACTTATGATGTAAATGTCACCTCAAAAGACGGACAAAGCCGCTTGCACAAAGTTGCAAAAATTTGTCTGGATTATGGAATGCGGGTACAGAACTCTGTTTTTGAGTGTGAAATTGATCCCGCACAATTTGCCCTGCTAAAAAGCAAATTACTCAGAACAATTAATCCTGAAGTGGATAGTTTGCGATTCTATTTTCTAGGAAAAAAGGGAAGGAAGAGGATTGAGCACGTAGGTGCAAAGCTTGTTCCCGACCCACTTCGGTCGCATCTGATTATATAGTTATCAGGAAGAAAATTTTTTCCGCTAAACTGTAGTAGTCAGAAAAATCCGGTTGGATTAGCGGTTCCTTTAGTAATTGATTTATTTAACTAATGTAAAAAACTCTTTAAAAATTTGACGCTTCTCTAAAAAAATCGCTTCGATTAACGGAATCAACGTGAATTCTACTTATTATTCAATATAATTAAAATGAGACA
# Right flank :  TTTTTGACATTGTATGTTCCGAGTGCCGGAACAACGTGGCGCCCCACGCGGGCTGAGGAATCCCCTCATTTTTTCATTCAAAAAAACGTACCTTATTAGGGTCAAAATGACTTTAAATAATGTCGTTTCCGCGTAGCGGAAATCCATCTTGCAAACAAAGTTAGGAATTATCTTGAGAAATAGGGTGGATACCACCGAATCCCCGCGGCTTTGACCGCGGGCCCACACGAAGCCAATTTAATGTTAAGCACACTTGTTTATGACTACCCGTTAAATCTTATTTTTTGGCAACATTCAAACTTGTTTGAGGACCATGCTACTCCAACAGGCATGGGCCCCGCGGTCAGTGCCGCGGGGATTCGGACGGGGAAAATATTGGTGTAGATAGCTATGGGCTGCGACCGCGGGCTAAGGATGTTTTATCAACCTCAGTTTCCGTTGTCTAAACAGGGGGATTTCGTTAATATCGCTAAAGAAAAATTACAAGAGACGATAAAATG

# Questionable array : NO	 Score: 9.26
# 	Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCGCCCCATGCGGGCGCGTGGATTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [5,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTCGCGCCCCGTGCGGGCGCGTGGGTTGAAAC with 94% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.80,-9.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [43.3-73.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,9.64   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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