Array 1 109968-113839 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZBW01000005.1 Acinetobacter baumannii strain LUH_6220 Acinitobacter-LUH6220_93, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 109968 30 96.7 30 .............................G TTGGGGGTGGTGGTACTGCTGTCAATTTAG 110028 30 93.3 30 ............................AA ATCCGTCTGAAACGATTGCTGACAAGTTAA 110088 30 93.3 30 ............................GC CACCGCCGATTCAGTCGGGCTGCTCTAACA 110148 30 100.0 30 .............................. TGGCTGCAAGCGGAACCATAATCCATGCAG 110208 30 96.7 30 ............................A. TGAGATAACGGAACCGTCATAGACCCATAA 110268 30 96.7 30 ............................A. AACGAGAAGCGTTGCGTAGACTTACAACTC 110328 30 93.3 30 ............................AC AGTGATACACGCATGCACAATACATGCATG 110388 30 96.7 30 ............................C. CAACTTGAAGAGCAAATTAAGCTTGCTAAG 110448 30 93.3 30 ............................AG TGAATCATTATCAATAATTCCCCTATTTGA 110508 30 96.7 30 .............................C GTATTTGTAAGACATATCTAACCAAGAATG 110568 30 93.3 30 ............................AA TCACTATTGCGAACCCGACTAAGGTGGACA 110628 30 96.7 30 .............................G CAAGAATTGAAACAATTCAAAAGGTTGCAC 110688 30 93.3 30 ............................GG TGCGCTTGATACAGCTTATACTGAAATTCA 110748 30 93.3 30 ............................AG CAAAGACAGGTTTAGAAGTCACCTGATATT 110808 30 96.7 30 ............................A. TAGAAGACGTGGACTCCCCCAACCTTTCAA 110868 30 100.0 30 .............................. TGCGCTCTTGCGGTTATTATCAAAGACCTC 110928 30 93.3 30 ............................AG CATGTGCTAAATCAGGGAAAAGAAAAGCCA 110988 30 96.7 30 .............................A ATTATAATCGCAATAGCTTCAATACTCCTA 111048 30 93.3 30 ............................AG TGCGTGAACATTATTCTTTCTGCATCAGCT 111108 30 93.3 30 ............................CG GTACGTTCAACGGTCAGCAGATTTGTGTTA 111168 30 96.7 30 ............................A. TAATAGTAATCGTAGTGGCGGTGTGTCAAT 111228 30 100.0 30 .............................. AACTTGCTTACGGCCAACACCTGTAATCAA 111288 30 93.3 30 ............................AG CCAACTTAATAGTAGAAAGGTAATGCCCTT 111348 30 96.7 30 .............................A CCAAACCAATCAGCAATGGAAAAACCACCG 111408 30 96.7 30 .............................A TAAAACGCGCAAAAAAATATAAGGGACGTA 111468 30 100.0 30 .............................. AAACTGATTTACAAGCTTGATCAGTAGGCC 111528 30 96.7 30 ............................A. CATGAAGCTTATTAAATGACTGACATGGCT 111588 30 93.3 30 ............................AA AGATTCTAGCCCCCTCAATTGAGAAGTTAT 111648 30 96.7 30 .............................A TTTAGAAAGCTTGGAAAATAAAGGTGACTG 111708 30 100.0 31 .............................. TGCCGATGCGTGCAAACATTTGCTCCGCTTC 111769 30 100.0 30 .............................. ATAGATGGCTTTAACTGACTCCCAGCCCAT 111829 30 96.7 30 .............................A TAAGAAAAATGCAAAAAAGGCATTTATTAG 111889 30 96.7 30 ............................A. ACACATGTTTTTCTAATAAGAATAAGACAA 111949 30 100.0 31 .............................. ACCAGATAGCAACTCTCTAGGTCAGATAGAC 112010 30 93.3 30 ............................CC AGACTTGATTTTTATCACCATTGAAGAGTT 112070 30 93.3 30 ............................CC AGACTTGATTTTTATCACCATTGAAGAGTT 112130 30 96.7 30 .............................C AGGTAATAAAAAACCGCCCGAAGGCGGTAT 112190 30 93.3 30 ............................AG AAGAAGGCGTAAGAGTTCTATTTTTAGACA 112250 30 96.7 30 .............................C AAAACGTATGGGTTATTGATGCTCAAGATT 112310 30 93.3 30 ............................CA ATCCATAAAACCCCAAACGATTATTAATAA 112370 30 93.3 30 ............................CA CTGTATCTAACCCGTCGTGTTGATAAGAAA 112430 30 96.7 30 .............................C GTTGCTACGCGCCACGGCGCACCCATCGTT 112490 30 100.0 30 .............................. GAATCGGCCGCTTTGCGTATAAACACCACC 112550 30 96.7 30 .............................A AAATCACATCAGGGAAGTGAAGGCGAGCTA 112610 30 93.3 30 ............................GA GAATGATTTAAATTGCATTAAGCCTTTAAA 112670 30 96.7 30 .............................G GAAGTCATGAATGTAGGTGTTGAGGATGGC 112730 30 93.3 30 ............................AA TAGAATTAAAACCACGTTGATAATATAGGT 112790 30 93.3 30 ............................GA ATTGCACTTGCTAAGCCAATAATGCCAACT 112850 30 93.3 30 ............................GA CCCATAAATCAAACAAGCCAACATAATTGA 112910 30 100.0 30 .............................. CCTCAACTGACATTTCCAAATAGTAGAGGC 112970 30 93.3 30 ............................AG TAGTTGCACCAGACTCCGCACAATCTAAAA 113030 30 93.3 30 ............................AA GAGAACGAACGAAAGTTCATGGACATGTTG 113090 30 96.7 30 .............................A AATGTGATTATTCAAGATAAGCTAGGCAGT 113150 30 90.0 30 .........A..................GA CCAATGGAGCACGATAACCCCATGGTTTAT 113210 30 96.7 30 .............................A AGTTAATTAAGGGTGTGGCTATGGTTGCAG 113270 30 93.3 29 ............................AA AATCACAAATACATAAATCATTTTTTATC 113329 30 96.7 30 ............................A. AAAGCGCACAACCCATTGATTTGTATTTTT 113389 30 93.3 30 ............................AG CAAATAGATCAACTGGTGCGCCCTGTGAAT 113449 30 93.3 30 ............................GA GATTCAAGTTTCACCGGATGGCACAAGTAA 113509 30 96.7 31 ............................G. AAAAAAGAGCATTTCCAGCAAAAATTGACGA 113570 30 100.0 30 .............................. TAAAGCTAAATGAGGGTTAAACCTAAGAAA 113630 30 90.0 30 .......T....................AA CGTGAACAATTGTTTTAGCTTTGAACATTA 113690 30 90.0 30 .............C...T..........G. TACTGGGTTGCGGAATATATTCGCAATTAT 113750 30 86.7 30 A......A.........T..........A. TTTGATCTTTACTTATTCTCGCTTCAAACA 113810 30 73.3 0 .......A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 65 30 95.0 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.19, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //