Array 1 46269-45151 **** Predicted by CRISPRDetect 2.4 *** >NZ_LQMV01000021.1 Acinetobacter calcoaceticus strain GK2 GK2_c2_, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =========================================== ================== 46268 28 100.0 31 ............................ CTTAAACCTTTCTGTCTTAAATTGCATGATC 46209 28 100.0 32 ............................ TATCCAAATTTAGACATCAAAAACCTAAGTAT 46149 28 100.0 32 ............................ AATTACAGAAATTAATACTGTTGCTGTATTGA 46089 28 100.0 32 ............................ GTAATGGAATAACTAAATATTAGCATCCCTAT 46029 28 100.0 32 ............................ TTTCACTTGAATTTGCTGTTCAGACATTTGGT 45969 28 92.9 32 ...AC....................... ACTCAATCAGACCACCTTCATTAAATTGTTGA 45909 28 92.9 32 ...AC....................... CATCCCATTGCCAATCACCATTATTTGAAGGA 45849 28 92.9 32 ...AC....................... ATTTAGAACAGCGATATTTTCATTGACTAATC 45789 28 89.3 32 ...GC.......T............... GTAATGCTTTGAAGGTTTTTCGCTGCACTCAC 45729 28 85.7 32 ...GC.......AT.............. AATACCAGTGGCCAATAACCTATTGCGAATAC 45669 28 85.7 32 ...GC.......GT.............. TTGCATTCCTGACCAAAAGATTTAATGGTGAC 45609 28 89.3 32 ...GC..........A............ CAAACATGAAAACAGAATACGCGCCTGATAAT 45549 28 82.1 32 ...GC.....A.TT.............. ACATGGGAGCTTCCATTTAGATGCGTTATCAA 45489 28 85.7 32 T..AT.......T............... CCTACGGGCAACATCCCTAACACACCCACCTC 45429 28 92.9 32 A.A......................... ATGAGGATGCGGACAAGTTTTGCAAGTGTTGG 45369 28 100.0 32 ............................ CAAACATGTATGCAAAAGACCTGTTTAATTAT 45309 28 100.0 43 ............................ TAAAGCTAAAGGTAAAAAGATTTTTTTCATTAGTTACTCATCA 45238 28 92.9 32 ...AC....................... TTGAGGTAACGATTTTGAGCTTGTTCTGTCAG 45178 28 85.7 0 ............TT..........AT.. | ========== ====== ====== ====== ============================ =========================================== ================== 19 28 93.1 33 GTTCGTCATCGCCCAGATGATTTAGAAA # Left flank : AAAAAACATTAGTTTTTGAACGCTCAAGCCACGA # Right flank : TTTGAATCATAAAAAGAAAAAGCCCCGAAACTTACGTTTCAGGGCTTTTCACGAATTTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCATTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCTTGTGACCCGACGAACAGGGTACAAGTTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTACGGTCGGGTTCCTAAACCACAAGTATTCTAGGAAGCGGACAAACTGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTAAAATATGCAAATTTGATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCAGCGTCGAAGCCAATAACATCCCCATGAATGTATGAACATCATAGCATAACTAAAATAAAATACTGTGCATTTTATCAACAGTCCGCTACTGATGAACATATTTACA # Questionable array : NO Score: 5.46 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.55, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCCCAGATGATTTAGAAA # Alternate repeat : GTTACTCATCGCCCAGATGATTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCGTCATCGCCCAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 143-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_LQMV01000022.1 Acinetobacter calcoaceticus strain GK2 GK2_c3_, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 142 28 100.0 32 ............................ AACTTTCTATATTTGAAGAAAAGCACGACCTC 82 28 100.0 33 ............................ AAAGTTCATGTGCAAGTTTACCTTGCCACTGAC 21 21 75.0 0 .....................------- | ========== ====== ====== ====== ============================ ================================= ================== 3 28 91.7 33 GTTCGTCATCGCCCAGATGATTTAGAAA # Left flank : ACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGGGATGAAGGAAAAAATTCTCACGACACTATTGCTGATATAGCCAACAGCTACCTCGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGAATGGGAATTAGCTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCTGATCTAGTTAAAGATGCTTTTGTTATGCCACTCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGAAATATGTAGTAAAATCAAATAAAATCATACATTTAACCCAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : T # Questionable array : NO Score: 4.95 # Score Detail : 1:0, 2:3, 3:0, 4:0.59, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCCCAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGTCATCGCCCAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 5245-5871 **** Predicted by CRISPRDetect 2.4 *** >NZ_LQMV01000022.1 Acinetobacter calcoaceticus strain GK2 GK2_c3_, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 5245 28 100.0 32 ............................ ATCTTCCTGAGCAATCACACTGACTTTAGTTC 5305 28 100.0 32 ............................ ACCAGGATTGCATCCTGAATATTTACCGTTTT 5365 28 100.0 32 ............................ TATGAAGCTATCAGAGTTCATTAACGGTTATT 5425 28 89.3 32 ...G.......CC............... TTATTCAAATCTGTCATGCTGCCTTCTCCATA 5485 28 82.1 32 ...GC......CCC.............. CACCAAGTTGTACACACAGCAAGTGACCAGTC 5545 27 85.7 33 ....C......C.C..........-... ATGATAGTTCAGAGCATGTGAATCTCCAAAATG 5605 28 78.6 32 A...A....T.CCC.............. ACAAATTCCGCGACATGTTCAGCAAAATGCCC 5665 28 89.3 32 ....C......CC............... GGTACTGACGCCAGTGGGATGATTATTTCGAC 5725 28 85.7 32 ...GC.....AC................ ATGAAAAAGATTAACGAAGTTGAAAACAACGC 5785 28 92.9 32 ...A.......C................ AAAGGGGAAAGTAAATACAATCTTATTAAATA 5845 27 85.7 0 ...A.......CC...........-... | ========== ====== ====== ====== ============================ ================================= ================== 11 28 89.9 32 GTTTTTCATCGTATAGATGATTTAGAAA # Left flank : TTTAAAAATAGAAGCCGTTTTACCTGCATTTGCCTGATAATCGGTTGGAATAAGGAAGTCTTCATTTAATAAAGTTCGAGCACTAAGATAGGGTAAATCAAGTGCTTGTTGTTTACTTAAACGAATCCCACCTTTTTCAATATTGGAATTAATCGTCTTTAAACTAAAGTGTACCGATTCTTCTAAAGCGTTTATAAAAATATCAGTTTGTGGTTCAGGCATTATCTTCCCCGTTTTTGTTATCTAGCCAATTTTTAACACATTATTTAAAAAATGAAAGTGTTGAAGTAGAGATCTACGACAAATTAAGTCGTAGAGACAACTGGAGGAAAATATTATATGCTCTATAAATTTAGCCTAAGACGATTAGGTTATATTTTTTGAAATTAGAAAAAATTAATATAATTCAATGAATTATACTGTTGTTTTGTTTTGAATTTTTTTGATTCATTAAAACTTTATATTATTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCTA # Right flank : AGAGTTCCTTTCAAAATTTAAGACGACGTATTTTGTCGTTAAAAGGCCGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAAGATTATATTTTTATTATATTCGAAGTTTAACAATAAACTATGCATGTCATTCTCATCTCTGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCGATCTTGGATAGCTATGCTATTCGTACAGGACATTCGTCTTGGCAAGCACCAATGACAATGGATGGCTTAAAAGAAATTCGTAGTGCATTAAAAAAAGTAGCCACTCGACAAACTGCGGTAGCCGCTTACATTAATTTTGGTGTACGAAGAATGAAGCTGGCATGGGTTGTGGGAGCAAAACATAAATTTGCGCACGACGGTGCATATCCAGTTGCATCGACCAAAAAACAGCAAAAACTACTGATGCTAGATGAATGGGTCAAAGTAAGTAGCTTGTTGGCGGGTGCAGCAGGAGACATGCATGATATTGGTAAAGC # Questionable array : NO Score: 5.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.50, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.45, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTCATCGTATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: F [matched GTTTTTCATCGTATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-19] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //