Array 1 1366502-1364221 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP047630.1 Lactococcus raffinolactis strain Lr_18_12S chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1366501 36 100.0 30 .................................... AACGGTTCTATTTAATCTATCAATGACAGA 1366435 36 100.0 30 .................................... GCCAACGGCTGAAAAAGTGCAACTCGTGAA 1366369 36 100.0 30 .................................... ATCGTTTGCGATACCAACCCAGACCACCCA 1366303 36 100.0 30 .................................... TATTCTAAAGACAACTTACTGACAATTAGC 1366237 36 100.0 30 .................................... ATCTGTTTGAGGACATCATTTTAATGCAAT 1366171 36 100.0 30 .................................... TGACTTTGACGCTGATTATGTCGTACCAGT 1366105 36 100.0 30 .................................... CAACGGATAGAACAGAATTGAATACATTGC 1366039 36 100.0 29 .................................... TTATAACTTGATTATACCACAGAAAGGGG 1365974 36 100.0 30 .................................... CCGCAAGCGAGCGCAGAAAGACCCTAATTT 1365908 36 100.0 30 .................................... TCTCGCTTCGTCTTGCGCCTTGGCGTCTCT 1365842 36 100.0 30 .................................... ATTCGGTTATTACGTAGTTACATCAGATGG 1365776 36 100.0 30 .................................... TTGATTCTGTAATAGCTTCAATGACTGTTT 1365710 36 100.0 30 .................................... GAAAAACTTTATCACTCAAACCGAACTATA 1365644 36 100.0 30 .................................... GGGTAGCCGGTAAAGATTTTTCAATTGCTG 1365578 36 100.0 30 .................................... AGGGATCGTTGAGTATAACGTGTAATGGTG 1365512 36 100.0 30 .................................... GACGTTTCTTGATGCTGTCAAGTTCGTCAT 1365446 36 100.0 30 .................................... TAACCATATAACACTATACAACTAACCACA 1365380 36 100.0 30 .................................... TATTACTCATATATCTGGTCTAATTCCTCC 1365314 36 100.0 30 .................................... CAGTATCTTTAGTGATAAGGTGGTGAACGA 1365248 36 100.0 30 .................................... AGCTTTGCAAGTTAAAGCTGACGCAGAATA 1365182 36 100.0 30 .................................... TATGTCAATTATTACAGTAACGGTTCAAGC 1365116 36 100.0 30 .................................... CAGTTATAGATGATATGCCCGGTAAAGATA 1365050 36 100.0 30 .................................... AGCAAGTTATTCAGATTGATGAAGTAGACT 1364984 36 100.0 30 .................................... TAAGATGGCAACAGTTGCTGAATTAGAAGC 1364918 36 100.0 30 .................................... TGACACGTTGCTTTTGAACAACACTTGATA 1364852 36 100.0 30 .................................... AAAGACTTATGTCAATAATGACTATCAGGG 1364786 36 100.0 30 .................................... GCAGGTTCAGAAAAAGTAAATCTGATAACA 1364720 36 100.0 30 .................................... ATATCTTAAATCCAGTCACTCATGAAGTCA 1364654 36 100.0 29 .................................... TTCGTCATCAAACAAAGATGCGACATAAT 1364589 36 100.0 30 .................................... ACATAAGCTCGCTTCGTTGACATAGGCTCC 1364523 36 100.0 31 .................................... CACTGGGCGAAAATAGAAGGTATCGCAGTAG 1364456 36 100.0 30 .................................... CACACATCAAAGAATAATCCAGAACCTCAA 1364390 36 100.0 30 .................................... CAGTAGATAAGACAGAACTGTTCACACAGA 1364324 36 100.0 30 .................................... ATATCTCAACGTTTCCTATCTGCTTGACAC 1364258 36 77.8 0 .........................T.A.TGG.CTA | AG [1364227] ========== ====== ====== ====== ==================================== =============================== ================== 35 36 99.4 30 GTTTTAGAGCTGTGTTGAATTGAATGCCTCCAAAAC # Left flank : ATTGGTTATGAACTATTAGATCACGAACTTGATTTAGAGCAAGATGAAATTACTATCCAAGAATTATTTCAGGTGCTAGGTGTTAAAATTGAGACGTCAAGTGATACTATTTTTGAAAAGCTATTCGAGATTTTACAGATTTTTAAATATTTATCCAAGAAAAAGATGCTTGTTTTTATCAATGTTGCGAGCTATTTGACTTTGGAAGAATTGCAAGCAATTCAAGAATTTTGTGAGTTGCAAAACCTAAAAACTCTTTTCTTGGAACGATATAAAACACCCGGATTTCCTCAGTATATATTGGATTCCGACTATTTTATTTGCACTGAAAATATGGTATAATTAAGGAAATATAAGTGTTTCAACACTTGAAATGTCCTTTGAAAATTTAATAAAATAAATTAAAAATCAACACCATGACATTCATTATTCTGAAGTCCTTCGCTAGGACAAATAGCAAAAATCTGAGACCTTAAAAATGTAGAAAAATTTTCTCCGAG # Right flank : GATTTGGATAAAAAAAAGACCTCAAATGGTATTTTTTTGACTCTATGAGTTATGTTAAAATTAGTGCATTGTTTTCAAGGCATTCAATACCACCAAAATTAGAAATAGAAAAATACAATTCATTGTTTTTTACAACTAAAAAGATATTCTATTTCCGTTACTAGTTTCTTAAACATCACAATAATTTACAAGCACAGTCACTCATTTTCACGTCTACCCCTAAGTAACTCTCTAACAGCTTCACGATCCTCATCAGACAGAGGATATCCATCAAATGAAGTAAATGAATCAAGAACAGTATTTAAATCATCAAATTTTGATGATTTTTTTTCGTCTGTATTACCTAGAAGATAGTCAGTTGAAACACTAAAAAAGTCAGCTAGTTGTTGAATATTTTTAGGATTTCTTTTTCCGTTTTCCCAAAGAGCATAGGATTGTTGAGAAACGCCAAGTTTTTCAGCGATCTCTTTTTGAGTAAGTTTAGTTTCTAAACGCAGCGA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGAATTGAATGCCTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.70,-3.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //