Array 1 695030-694673 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCGV01000001.1 Clostridium pasteurianum strain GL11 contig.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 695029 30 96.7 35 ................A............. TGAGGTGCTGTTTATGAATGAAAAAACTACATTAT 694964 30 96.7 37 ................A............. TTTTTATAATCTTCTTGGAGCATTTTTAGCTGTTCCC 694897 30 100.0 36 .............................. AGAATGGTGACGTACTTGAGAAAAATGAGAAACGAA 694831 30 100.0 34 .............................. AGGAAAGATAATATAGAACATATCAATGAGACAC 694767 30 100.0 35 .............................. TGGTTCATATTTTTAAGTATTGATACCATTTCATA 694702 30 86.7 0 ................A..........TTG | ========== ====== ====== ====== ============================== ===================================== ================== 6 30 96.7 36 GTTGAACTTTAACATAGGATGTATTTAAAT # Left flank : ATGAAAAGCGGGTAAACAAGGTGTTTAAGATCTGCAAAAAGTATTTTCATCACCATCAGAACTCTGTGTTTAGAGGTACCATAACCCCGGCTAATCTCATAAAACTAAAGAGTGAAATCAATAAAATAATTGAAGGTAAGGATTTTGTAACAATAATAAAGCTTATAAATGGTGATTGTTTTGATGAGGAGACTTTAGGTATAAACGAAAAGAATACGGAGGATTTAATACTATAATTAAATGAATTTTTCCAACTGATGCAATAAATGAAAGTGATTTAATCTATTGTATATCAATGTATTGAGGCACTTTTTTGTGTAAATTTCAAAAAAATGAAAACCGGTTGGAAAAATTTTAAGGAAATCCTTTATTGATGCGGGTTAGGAGAGTATAATGAAAACAAGTAATGGCTATTTTACAGTGGTTGAACTTTAAGTTGAACTTTAACATAAGTTATACAATCTAATGCTGAAGTAAAAGAGCATGAGGTTGAACTTTAA # Right flank : TTCTGATTTACTCGGCTATTGAATTTATGAAAATCACACTATAGCTATGCATGGCTCTAGAATGGTTATGTTAGTCAGTATAATTTTGATAAGCTCAGTTTTTAATAAAAAAATAATACACGATATTGCACAATATTTATGTGTTATGTCATGTATTTTTATAATTGTTAAGATTATAGTTGATTTTAATATAATTACTTCATATTAATAGATTTTACTACTACAGTATCAATATTTTCGAGATCATGTATCATTGATTTTAATTTATCTTCTTTATCACGGAAATTCAAAGTTATAAGTCCATGATCATGTTCGCCTGGATCATGGGTTCCAAATCTAGAAATAATGCTATCACCATATTTGGTTAACACTTCTTGAACATTTGCCGCAGATTTTGTTCTCTTGTCAACAAGAATTCCAACTATACTTAATTTATCCAAAATATATTCACCTTCCTCTGATTTTATATTATTATATCCAACCTTGTTTTTACTATTCAC # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACTTTAACATAGGATGTATTTAAAT # Alternate repeat : GTTGAACTTTAACATAAGATGTATTTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 705810-704273 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCGV01000001.1 Clostridium pasteurianum strain GL11 contig.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 705809 30 100.0 37 .............................. CAGTTAAGAATACTGGAATCACTCTGAATATAGTTTA 705742 30 100.0 36 .............................. ATATTAATGTTGCATAGTTCAGACAATCTTAAGCCA 705676 30 100.0 35 .............................. TGTCACTGAACTAACCACTGCATTTAAACGACTTT 705611 30 100.0 34 .............................. TACAGAAAGCCACGCAGGGAGTTAGCCATAATGA 705547 30 100.0 37 .............................. TTGAATCAGTTTCTTTTGACTGCACTATTGCGTATTC 705480 30 100.0 35 .............................. AGCAAAAGAAATTTGCCAACTTTATCTTTACCCGC 705415 30 100.0 34 .............................. TTGTACAAGCTAGAGGTAGCTGAACCCGCATCAT 705351 30 100.0 34 .............................. TAAAGTATTTAAGTGTTTTGGTATTAAACTATTT 705287 30 100.0 37 .............................. GGTAAAACAACAAATACTGCTGTTTTACTGCTTTCAA 705220 30 100.0 37 .............................. TACTATCACCATTCCTTAAATATTTCTCTTACCTATA 705153 30 100.0 35 .............................. TGAATTCCCATCCTTCTCCCTTTTATGAATATCAC 705088 30 100.0 36 .............................. TTATTATTATAATCCTTATACCATATTTCTTTATTG 705022 30 100.0 36 .............................. TAACCTGACGTTATGAATTGAGTATTCATTTTCTGT 704956 30 100.0 38 .............................. TGGTAAAATGCAAGTGCTTTTTCACCAGCAATTCGAGC 704888 30 100.0 36 .............................. AGTAGTAACTTTTGCAGGAATCTATTTTAAGTTAAG 704822 30 100.0 36 .............................. TATTTCAGCCAATAGAAAATTTTATCCTCAATATTT 704756 30 100.0 34 .............................. AATGATGCTATTGCTAGTGGAGCGATTAGTTTTA 704692 30 100.0 36 .............................. TTATGAACAGGGTTATTTAAAAAATAATGCTATATG 704626 30 100.0 34 .............................. TAAATTATGTAAAAAATATGAAAATGAAAAAATA 704562 30 100.0 36 .............................. AAATATACTGACTCAGAATAATAACCATTAGATTCA 704496 30 100.0 35 .............................. TAGATATATAAATCTACTGCATTGGGTTCAGTTGC 704431 30 100.0 35 .............................. TAGTGTTGCACTGAAAACTTAGTCCGTACAGCATT 704366 30 100.0 34 .............................. TCATCTATAATGCAAGTTTCCTCCATCTCTATAT 704302 30 96.7 0 .............................A | ========== ====== ====== ====== ============================== ====================================== ================== 24 30 99.9 36 GTTGAACTTTAACATAGGATGTATTTAAAT # Left flank : CGCCTTCTGAATAAAAATATTTTGTTATATCGTTACCATTTTTATCAATATAGTAGGAACGAAAAGCTCCATTTATAACAAAGCCTATTTCCGAGGATTTTTCACCTCCCTGCAGGAAAAATGTATCTTTTTTCAATAATCTTGGCTTAAAAATACTCTTGAGTAAAGCGAAATTTTCTTCGTCCAAATAAATTCCAATGTTTCTTGAAAACTTTATAAATAAGTCATGATATATATTTTCATTCATTTACAGGCCTCATTTCTTTTATTTAATTCAAATGTTTTTATAATTATATCATTTTAGAATGTATTTTAAGATATATTTTTCCAACCGTATCAATAAATTAAAGTGCTTTGAGCTATTGAATTGCAATGGTTTGAAGCATTTTTCATATGCAATTTGTGAAAAATGAAAATCGGTTGGAAAATTTTTGAGGAAATCCTTTATTAATGCGGGTTAGAAGAGTATAATAAAAACAAGGAATGGCTATTTTACAGTG # Right flank : GGGAAGGGAATATTGTATTAGATAGTCTTTAAAATTTGAATATTTTGTTAACATAAAAATCAGATACAGAATAAATTAATGTTAGTATAAATCAAGATTAAAAAAATTGCGGAAAATGATATTTGCAGATAGTTTTATTATATAAATGTGTTATTTTAGTGTTTGAAAAAATTAAATAAAATTCTTTATTTTAAATAGATAGAAGAGTATAATGATAAATAAGTATAGTTGGATTTTGCGCTTCTGAACTTTAACATGAAATGTATTTAAAATTGATGGGTATTTTATTTACGTAAAGCTCATAATAACTTTAACATGAGATGTAGAAATAAAAAATTAAAATATAATAAAAGTTTCCGCTTTATGTGTTATTATATAAATATAATTCATTGATAGGTAAATTATTACGTAAATAAAAATGTAAGGAGGAACAATAATGAATAAAATTGCAAAAGCTTTTAAGATAATAGAGCTATTACATCGAGAAGAAAAATTAACGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACTTTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //