Array 1 3058815-3058434 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP036546.1 Bacteroides fragilis strain DCMSKEJBY0001B chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ==================================== ================== 3058814 35 100.0 36 ................................... CCCCGATGCGTTGTGCGGCATGAAAAATTTTTATCA 3058743 35 100.0 34 ................................... CCAAGCCATAACACCTTCAAGGGTTACTTTAACA 3058674 35 100.0 33 ................................... GTTCTTGGTTACATAGGTAATGGTGTCATTGGT 3058606 35 100.0 33 ................................... TTCCGGAGCTTCATTCCAATATAGCTCCTTACA 3058538 35 100.0 35 ................................... GAAGGCAATTGCTTTTTTTGCCAGCCAATTGTAGA 3058468 35 85.7 0 ...........................C.A.C.GT | ========== ====== ====== ====== =================================== ==================================== ================== 6 35 97.6 34 ATGTAGATCTATTCCAGTATAATAAGGATTAAGAC # Left flank : CATAGGCATCTTGAAGATTCCCCGCATTCACTCGAAATAGTTTTTTTCTAAATTCTTTTGCGAAAAAAAGAAAAAACTTAGTCATCTGATAATATGAAGATTATTCTATATTAAGAAAAAATAAGTGTAAAAAGAGATGCGCAAATAATAGCTTTTACGTATATTAGCAAATCATTTGCGAAAAAAGGATTGATATGTTATGCGCTCTTTGAAATATTGTTCTATATATCAGCAACTTACGCAACATAGTTTTAGGGTTGTTTTCGAAACTCGCCCACCCCTAAATATCCAACGATTATTTGCGAAAAATGAAGTTTACACAGCATTCTAATTATCAATCATTTAGGTCAAAAAATCACTATTTACACATCAGAATTACAGAAAAAAAGACCTACTTTTGCGAAAAAAGACTTAGATTCGCATCTACTATTCTGGTTTACAACCTATTATGATCACAGACAAATACATTTAAGAATATATAATAGTCTAATAATCAGAGT # Right flank : TGGTTCTTCTTCAAATTTGGTGGTAAGCTTTCTTCTACTCATGAATCTAATTCAGTTTTCGGAAGTGTAAGCTCTCGTTTATAGTTGACAAGAAAGCAAGTATCCCGGCTTTCGCCCGAAAAGCCCATTCGTGAGGCGGAGAAGCGAATTTTAGACTAAACCATCTGAAAATCAACATCTTTAAAAAGTAAGATTTCTATCCTCAAAAGCTTTGTTTTAACACAGAGTTAAAGCTTATTCTTTGGATGTAAATAACAAGTTCTTTAAATGCATAAGACTTGTTATTTGCGCACAAGAACCTGACAACCTGAAAAAGGCGTTAACAATGTTAATTGAAGAAAGGTATAAGGATGAAGATACCGGTTCAGACGGTGTAGATTCACTTCCGAAACTTGAGTTATCTGATTCAGCCAGTGTCTGTTTTTTCTTATTAAAGCGTAAGCATTCGGCCTCGTGCGTGTTTCTCTCCAAGTTATAATAAAGTCAAAAGCCAGACGTAT # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTAGATCTATTCCAGTATAATAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA // Array 2 3937439-3935808 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP036546.1 Bacteroides fragilis strain DCMSKEJBY0001B chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 3937438 29 100.0 34 ............................. AATTATGCTGCTTCTGGTTCTGCTTCAATTAGTT 3937375 29 100.0 33 ............................. ATTGATATGCGACCTTTTAGGTTTAACAATTGT 3937313 29 100.0 35 ............................. CAAGTCCTTGCAAAGTTCGGATTCATTGATGAGGT 3937249 29 100.0 35 ............................. ACTTTTATGGCTGGTATTCGTGCAGGTGGTATTTC 3937185 29 100.0 38 ............................. TTACGTAGTGCTTTTGGTAAGCCTCTTATTGTTAATTC 3937118 29 100.0 35 ............................. CCAACAGCATGATTTACAAAACGAGAACGATAACC 3937054 29 100.0 34 ............................. AAATAAAAATTCTTAACTTCCATAACTAAACAGG 3936991 29 100.0 36 ............................. AGAGTAGAAAGAGCTATCTGTTTTTCCTGTGGCAAA 3936926 29 100.0 37 ............................. AATATCGACGAATCAAAAAATACAAACGCTTAGAAAA 3936860 29 100.0 34 ............................. CTTTAAAAAAAGTGATTCTTTTGATTCACGATAT 3936797 29 100.0 35 ............................. TTCTTTGTATTATGCACCTGAGGAACTTCGGTTGA 3936733 29 100.0 35 ............................. ACTTTCATGTTATTGATCGTTTTACTGATCGGTTT 3936669 29 100.0 35 ............................. ACGTAGAGGTCGTTAATTGTCTTTAGTTTTTACTC 3936605 29 100.0 35 ............................. GCTTATTTATTATAAGAAAAGACGCTTTATTCATG 3936541 29 100.0 34 ............................. ATGCAAGCACATCGTTCGACCCGTATTTGTGGTT 3936478 29 100.0 37 ............................. ACGAGCTTTAACAGGGTCTTGGGACCAACGATCCATC 3936412 29 100.0 35 ............................. TACGAAAACAAATTACTCATTTTTCATCAAATTTA 3936348 29 100.0 34 ............................. TACGAAAATAAACTACTCATTTTTCATCAAATTT 3936285 29 100.0 35 ............................. TATTAAACAGGTTTTTTGTCAACCTCTGCAATCAA 3936221 29 100.0 34 ............................. AATCGCCAGCTCTTAGAAACAAACTGTCTAAAAC 3936158 29 100.0 37 ............................. ACTTAATAAGTCTAAGTATGCGTCTGTGGTTGATGAT 3936092 29 100.0 36 ............................. GATAGAATCATAAAGGTTAAAAAAGATTTACTCATT 3936027 29 100.0 35 ............................. CTGTCGGAGTGATGAAGTGGAACGGTAGCTCAATA 3935963 29 100.0 34 ............................. AGTAACGTTCCTGAGAGATGAACTTAAACTTGAT 3935900 29 100.0 35 ............................. CTGAGAAAAAAGCAAAATAAAGATAAAATGACAGG 3935836 29 86.2 0 ..A......................G.CT | ========== ====== ====== ====== ============================= ====================================== ================== 26 29 99.5 35 GTGTTAATTGTACCTTATGGAATTGAAAC # Left flank : CCGTTTAAAATGTATTGGTAAATATGTATGTTATTTTAGTTTATGATTTTGGTGAAAGGAGAGTTTCTAAGATGTTGAGATTATGTCGTCGGTATTTGAATTGGATCCAGAATTCTGTGTTTGAAGGTGAACTCTCGGAAGTACGTTTAAAAGAGCTATTATTATTGGCAAAAGGGTTTATGAATCCCGAAGAAGATTGTATTATCATTTTTAAAGGGGCTACTCAATGCTCTTTGGAGAAGGAAATAGTGGGTAAAGAACTTTCTAACATCGATAATTTTTTGTGAAACGGTTGTCGAAGTGGATCGTTATTGTGAATTATTCAATGATAATGCAACCGAAACGCTCTATGACGTGTTGATACATAGATGTTTAGCGCCTATGTCGCTAACCCATGTTTTTTATATTATTCTTGATCGACGCATTATTTCTAAATAAAAGTATTTTTTCTAAAAAGTATTTGTCTTATTACTAAGTGATTGCGTTGGTTGATGGACAGA # Right flank : AAGGAAGATGTATATTTATAAGATTGGCTTAATAGAATGAATTTTTTTTTCTTGCTAGCATATTCTCTCATTATCTTTTGGGAAATGTTTTTATTAATTCTATTTCCTTTTTATTAGAAAACAATCCTTATATTTGTCCCTTGTATTATTAATTTAATGACAAATGACACTTATGAAGACATTGAATTTTATGAAGACGCTGCTTTTATTGGTAGCTATAGTAGGCTTGAGCTCTTGTGGCGACAAGTATTATTCAGATGATTATTTGCGAAACAGTAATGCAAAGTTATGCGGAAAGACTTGGGTGAATGATTCTGATAAAAATGATGCGGATGAATGGGTGCGCCATACATTGAAGTTTGATGATAGCGGACGGCTGGCAGAAACTTATGCCTATTATCATTTGAATGAAAACCAACCTTACCGGACAGAAACAAATAATCTGACTTGGTCCTGGATAGACGATTCGATGGAAGGAATTGTTTTTGACTATGGCGTAA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTAATTGTACCTTATGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //