Array 1 6424-7623 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMYZ010000005.1 Barnesiella intestinihominis strain 1001302B_160321_H4 NODE_5_length_357361_cov_49.7352, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 6424 47 100.0 29 ............................................... AGTACCAACCATGACAGAATTATTATTAC 6500 47 100.0 30 ............................................... TTATTGATGGTATCATTGTGATGTGTAGTT 6577 47 100.0 30 ............................................... ACTTTTCCGAATTTTCTAATGAGAATTTAC 6654 47 100.0 30 ............................................... GCGGTCCTTATCCATTCTTTTTTCCGGAAT 6731 47 100.0 29 ............................................... TATCTAAGAACGTTTCTGCTTGTTCTCGC 6807 47 100.0 30 ............................................... GCGTTGGTACTAAAACACCTGGAGCCATAG 6884 47 100.0 30 ............................................... AAAAGGGTTGATCGTTGTCTCTCCCATTCT 6961 47 100.0 30 ............................................... ATTGAGCGAGGATAAAAAAACGGCCCCGCT 7038 47 100.0 30 ............................................... AAGGTCCATCATGTGGCCCAACACTATCTG 7115 47 100.0 30 ............................................... AGTGTGACACCTGGTTTGAATAGGATAAGT 7192 47 100.0 30 ............................................... TGAAATAAACTGACTTGTATTCTTTTCAAG 7269 47 100.0 30 ............................................... GAGTTTAAATATCTTCTTATGTTGTGGCGG 7346 47 100.0 30 ............................................... AAATCATTTTACAAACCCATATCGAGATTA 7423 47 100.0 30 ............................................... TCTCTTTGAGGTATAACCATTAAGGCTATA 7500 47 100.0 30 ............................................... TCCGCTTCATCGCTATAGCGGCAAAAGACG 7577 47 93.6 0 .....................G..............T..C....... | ========== ====== ====== ====== =============================================== ============================== ================== 16 47 99.6 30 GCTGTATTTAATATGTCAAAGATACAAATTTGAAAGCGAATCACAAC # Left flank : TTATACAAATGTTTTAACGGGGAGTTACGTAAAATCATCTATCCAGAATTATAATTAATATGGATAGATTCAGCGAATATCGTATTATGTGGGTATTGGTATTTTTCGATTTGCCAACAGAGTCGAAACGGGAACGTAAATTATATGCCGACTTCCGTAAGAAACTGTTGCAAGATGGATTTACTATGTTTCAATTTTCCATTTATGTACGGCATTGTCCTAGTCGGGAGAATGCCGATGTACATATCCGCCGGGTGAAGCTTTCTTTACCGCCGTTTGGAAAAGTAGGTATTCTCTGTGTTACTGATAAACAATTCGGTATGATGGAAATTTTCTATGGGAAGAAAGAGGTAAAGCCACAGGTTCTACCTCAACAGCTCGAACTCTTTTGAAAAACAAAAAGCCGGTTTTTTAACCGGCTTTTTGATGAAATACAACTTTAATTTTTAATTCTAATTGGTTGTGTAATTGTTTGACTATTAAATGACTATACAAATTGG # Right flank : CGATGAGGTGCAAACTTTGGCTAAATACTACGTCGTCAAGGCAAATGTTTGTGTATCGAATGGGGTTAAATTAATGCTAACTACTTTGTTTCCAAATTGATACAATAGGGAATGTTAATATACAGTTTCCATGCCTATATCCGAGACTCATTCGGTGTCACACCTATCGCTTTCTTGAATATTCGTGTAAAATGCTGGGAATATTGAAAATCAAGAATGACGGGTTAAATATTGGTACAAGATAGGAGGAAATTTTGACGTGGGCAAGTTGTGGAAGATTGATGTTTTTCCCGACGAGGATGTTCTTCGTGATTGAATTGCCTTTCTTCTCTGACAATCTCTTGGCTGACCAATTTGGAATCGACAAAAGTAAAAGCTGTCGTGACGATGAACCAACTTCCCCGATATAAATCTTCTTTATAAAACAATGTTTCCCTTTTGTGCTTATCGTAAGTATAAGCCATTTCTTTGTTAAACGGTTTGCCAAACTTTTGGATAAA # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGTATTTAATATGTCAAAGATACAAATTTGAAAGCGAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //