Array 1 69214-68880 **** Predicted by CRISPRDetect 2.4 *** >NZ_VHOY01000030.1 Acetobacter sp. DmW_125130 NODE_30_length_110141_cov_28.762304, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 69213 29 100.0 32 ............................. CCTTGGTGGCGCCCTCAATATGGGGATGGGCA 69152 29 100.0 32 ............................. ATACCTACAGCCTGACAGATCTGCTGCCTGAT 69091 29 100.0 32 ............................. GCGTGAGACAGCGCGTGGTGGCTGAGGAGGCT 69030 29 100.0 32 ............................. GAACACCCGCGCAGGAGAGAAGGCGTGAAACA 68969 29 100.0 32 ............................. GGAACCACATGGGAACCGCAGGAACCTCGCTA 68908 29 96.6 0 ...........................T. | ========== ====== ====== ====== ============================= ================================ ================== 6 29 99.4 32 GTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : ATGTGCTGGCTGCCGGTGAAGCGGGGCCGCCACCAGTGCAGAAAGAGGCGATGCCCGTTGCGTTTGCTGATCCGAAAGGGCTGGGTGATGCTGGTCATCGTGGTTGAAAATGCGCCCCCGCGTTTACGCGGGCGGCTGGCTGTATGGCTTCTGGAAGTGCGGGCTGGTGTTTATATTGGCAGCTACGGGCGGCGTGTGCGGGAAATGATATGGGGGCAGGTCTGCGCCTATATTGAAGATGGCAATGCTGTGATCGCTTGGGCGGCTCCAAATGACGCCGGTTTTGAATTTGATACTTGTGGGGAGAACCGTCGGGTGCCGGTAGATCTGGATGGTTTGCGGTTAGTTGCTTTTGGTCGTGAAGCAGCTCTTCCGATGCAACCAGGCCCTGCTGTAATGACCCTTCCAAGACGGCGTGGAAGAGGGTAAAAAACAGTCATTCGTCTGGTAGATTCTTTGATAGTAAAATAATGTTTTAAAATCAATTGGTTCCACAAAGA # Right flank : GTGAAACCCTTACTCTAGTGGAAAAGGCATGGGGGTTACCGAGCAAGTGGGTAATCGGTATAGCCTTCTGCCCCCTGTGTGTACCAGGTTTGGATATCATCCTTATTCAGGGGAAGGTTATCTTCCAGACGGTGCACCAGATCCGGATTAGCTAAAAAAGGTCGGCCAAATGCAATGGCATCGGCAATACCGGTTGCGACCGTTTCAATCGCTTCGTCCCGTGTGTAATCCTGATTCAGAACCAATGGTTTTGTAAAAACTTTGCGGATCGGAGCATGCAGCTTCGGCTGATCGGTCTTGCCAAATGTGCCATGAGGGCCGGGCTCGCGCAGTTCGAGAAATGCAATATCGAGATCGTTCAGAAGCTTTGCGGCGGGTACGAAAACCTGATCGGGATGGGTGTCGATGCAGCCTTGTGTATTGCCATTTGGTGAAAGCCTGACAGATGTTCTGTCCGCGCCAATCGTGGCGATTACTCGTTTCGTGACTTCATGCAGAAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 24010-24709 **** Predicted by CRISPRDetect 2.4 *** >NZ_VHOY01000022.1 Acetobacter sp. DmW_125130 NODE_22_length_114516_cov_27.102718, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 24010 29 100.0 32 ............................. GATCTCGTAGGTTGGCGAGAGAGGCCTTGGTG 24071 29 100.0 32 ............................. GGTATCCCGCAAATGGCAGCCGGATTTCAGGA 24132 29 100.0 32 ............................. GTCAGCGTGGCGCAGGAAGTTGACCAGGCACA 24193 29 100.0 32 ............................. GAATGCGCCATCAAAGCAGGCGTGCAGGCAAA 24254 29 100.0 32 ............................. GCCAAGGCGCTTTCAACTCTGGATGGTGGCAC 24315 29 100.0 32 ............................. CTGGCAGCCAGATCGCACCACAGCACAAATTG 24376 29 100.0 32 ............................. AGGAACGCGCTGGGAACAAATCCGCATTGCTG 24437 29 100.0 32 ............................. GCTGAGGCGCGTGGCAACGCTGTCATCATCAC 24498 29 96.6 32 ............................T TCAAATACCTTATATGATCTGAATTTATCTAT 24559 29 100.0 32 ............................. AAAATCTACACCAACGGAGACGCGCTGCAACT 24620 29 100.0 32 ............................. ATAGGCAGGAACACGAAACGGCGCACGCCACG 24681 29 96.6 0 ........T.................... | ========== ====== ====== ====== ============================= ================================ ================== 12 29 99.4 32 GTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : CACTTATACGAGTTGCAAAGCCGGGAGGGTACATTTGGCTTTCATCTGGGGCGTAAAGCACGTCCACTTTGCCGGTATTGCGTAGCAGGCCAGCATCATCTTCCAGCCCGCGCGGGTAATGCTGGAAATCATTGGTGTTGTTGAATTGGATAGGATTTACAAAAATGGACACAATTCGACGGGAGGCTTTGCCATCCAGCGCATTTATGAGTGAGATATGGCCTGCATGAAGTGCGCCCATGGTCGGCACAAAGCCAATAGTCTGGCCATCTTTCCGCCAACTGGTGCTGAGTGCTGCCAGTTCTGCTTTGGTTTTTACAATCTGCATGATGAATCCTGAACGCCAGTAATTTAGTCAGCCGGAATAAGTGTTCCAAACTGCAAAGTGCTGCAATGTATCCATGAATGTGCCACTATTCCAGAAGTGGCTGGGCCCTTTTATGGTTGGTGGATTCTTTGACAGTAAAATAATGCTATGGAATCAAATGGTTCCACAAAGA # Right flank : GGCTGACTCCGTAAATAAGGTCGTGCTCGTTGGGTGTTCCCCACACGCGTGGTGACTAGCTTGAAACAAAACTTTAGGTAGAGTGAAAAGCTTCCAGTCTGTGCTATAAAGACGCATGTCTTACGCTGATTTTGTTCATCTTCGTGTTCATTCTGCCTATTCGCTTAGCCAGGGGGCCATTCGTGTGCCCGATATTGTGGGGCTGGCGAAGGAAATGCACATGCCTGCTGTGGGTATTGCAGATTCAGGCAATCTGTTCGGGGCGTTGGAATTTTCTCAGTATTGTACCAAAAGCGGTATTCAGCCTATTATTGGCAGCCAGATCGGCCTGCCTGCGCGTAATGACAAACCCGGCGCCCCCGCCGAGCCTGTAGTGCTTCTGGCACAGAATGAAGCAGGGTTGGCGAATCTCCAGTTTCTTTCTTCAGCCGGGTTCCAAAATTCAGATCCGGCAGACCCTTTTGTTTCTCTGGATTTGCTATGTGAGAAAGCAGAGGGGC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //