Array 1 156864-156236 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIGPV010000002.1 Pseudomonas cichorii strain LCYJ03 Scaffold2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 156863 28 100.0 32 ............................ AAGAGAAGGCCTGCTGCCGAAGAGCGCGAACC 156803 28 100.0 32 ............................ ACCATGAAATGGCGCGCCCCGAGCTGATCGAG 156743 28 100.0 32 ............................ TGCACCACGCCCGGCGTGCCATCCGGGTTTAC 156683 28 100.0 32 ............................ AGGCAGCTCGCCTGATTTCAGATCTAAAGAGT 156623 28 100.0 32 ............................ GACTTCGGGGGGAATGACCTGCTCGGCAATGA 156563 28 100.0 32 ............................ TCAGACTGGGCAAGCGAAGAGGATAATGCCCG 156503 28 100.0 32 ............................ GACAAAGGAATGGCTTGCAGCGAACCCTGGCA 156443 28 100.0 32 ............................ AACCGCTGGCGGGGTGGTAAACGTGATGGTGC 156383 28 100.0 32 ............................ GGGATAAGAATGTCCCAGTGCTGATTGACGTC 156323 28 96.4 32 .A.......................... AACAGATAACCGTCAGCCCGCGCCCGACCTCG 156263 28 85.7 0 .......................C.TTC | ========== ====== ====== ====== ============================ ================================ ================== 11 28 98.4 32 CTTCACTGCCGTGTAGGCAGCTTAGAAA # Left flank : TGCGCATCCCTATACTTCGCCGCCATTGAGCCCTGATGGCGGAATTGGTAGACGCGGCGGATTCAAAATCCGTTTTCGAAAGGAGTGGGAGTTCGAGTCTCCCTCGGGGCACCAAACAGCAAGACACCCAAGCGGTTGCAGAGCTTGGGTTTAAAAGAAACCGGCCAGTTGAGCCGGTTTTTTTGTGTCTGGGTTTTGGTGATTATCCGGTCTGATTGCCGGGCCTGTGGGAGCGAATCGGGCGGCGCTCCGCTCATTCGCGAGGCGGTGTTCCAGACAATACATATCCTTTGAATGTACCGGCCTATCGCGACTGAAGTCGCTCCTACAGGTCCGGCGCCAAACCACGACTTAACGCACCCTCTTTTCGACCCTCTTTTTTCAGACTCCGCTACCCCCTTTAAAATCAATAACTTACGAGAGCCACAAAAAAGAGGGTAAAACGGCTTAAGATAGGTGGTTTCTCTTTAAAAACGGAGAGTTATTAGGCAAGGTGTCTG # Right flank : GGGTTGACTCTCTTCATTGGAGGTGAATGGGGTACATCAAGAGGGTAGCTAAATCCTTGACTGGATTTCGGTCTTCAAAAACGACAAAGGCACCTTCCGGTGCCTTATTCACAAACAGGTCAGCTTGTCATCGCCATAAACCTGTCTGGCTCTACGATTGCTGGTTGCCCAGGATCCTTAGAGTCTCACAAGCCCCTTACGGGAACGAGACAATCATATGTATTACGCTAGCGTAATACAACCTTTCGCTATTATTTCCTGACGTGTGGCCTGTCATACCGCCTCACAGCCCTAGCGCCGATCGTACACCGACCTGAATAGCAGTGAACAACTCCTCAGGAAGAGGTATTGCTAGATATTCCCTTTTGCCCGTATGACGATTCTTCACTTTGATCCTATCCAAACGGGCGAGTGCAACGGTGTAAATCATGTCGCATTTCGCCCAGCACAAGGTCTGTGGCCCAGGTATCAACGACTCGAATTGGATATGGTGGTCAAGC # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGTGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTTCACTGCCGTGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //