Array 1 79166-77645 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026412.1 Acinetobacter sp. ACNIH2 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 79165 28 100.0 32 ............................ TTCAAGCGCAAGTAGTTCTTCCTTGGTTTTAC 79105 28 100.0 32 ............................ ACAAGGACTACAAGGTATCAAGGGTGATACTG 79045 28 100.0 33 ............................ CTGACCAATTGGCATCGTTCGGAGACAACACTG 78984 28 100.0 32 ............................ CTCAAGTGCTAGAAGTTCGTCAACGCGACTTG 78924 28 100.0 32 ............................ AAATGATGGGCATTGAGCAAGATAAGCTCAGT 78864 28 100.0 33 ............................ CAATTTCAAAGAAGGGGATACGCCAATTGTAGA 78803 28 100.0 32 ............................ ACTGTAAAACAGGGTCGCCATTGTGATGTAAA 78743 28 100.0 32 ............................ CCAGGCACTACCAAAGTTTATCCATTGATGAT 78683 28 100.0 32 ............................ AAGAAGTTTCCAAACAAAATTTGGTTTGGTCG 78623 28 100.0 32 ............................ TGTTCTATTTCGCTCTGTTTTCGCTTATAAGG 78563 28 100.0 32 ............................ ATCAAAGGACAAAAGCCTTTCGGTAATACGAA 78503 28 100.0 32 ............................ TAGTGAACCGTTGTCATATAAGGTTTTAAGTG 78443 28 100.0 32 ............................ TAAGCAGAAAATGGCCCTTAAAAAAGCGGCAA 78383 28 100.0 32 ............................ ATGAGTTTAGGCAGTTACCCTGCAATTGGTCT 78323 28 100.0 32 ............................ AAACCCAGCATTTGTGAGCTTTGACGCGACAT 78263 28 89.3 23 ...........A.T...........T.. TTCGAGCACTGGCATATCGCCAT Deletion [78213] 78212 28 82.1 32 CA..........AT...T.......... AAAAGTCCGTTATATGTGTTAAACCCTAGTGA 78152 28 89.3 32 ...A.......A.T.............. CCTTCAATCTTTGTTTTAGGTGCCAATTCAAA 78092 28 92.9 32 ...A.........T.............. GTACAAGAATTGTGTAATGAAGTCGTCTAAGT 78032 28 89.3 32 ...A.........T..A........... TAGATCAAGGGAAATACAAATTCATCTATGGT 77972 28 100.0 32 ............................ CGTAACTGAGCTTGCACTTGACTTAACTTCAA 77912 28 96.4 32 .............T.............. ACAATGGGTACGGTGACTTGGGTTTTACCTGC 77852 28 100.0 32 ............................ TTTTTAATCTTTAAACGGGTTCCGTTGGGTAT 77792 28 96.4 32 .C.......................... TAACTCAATCGTGCGTGTTGGTTCACGTGGTA 77732 28 96.4 32 .....T...................... ATAAAAAACCGTCCTCAAGTTGGACGGTTTCG 77672 28 96.4 0 .............T.............. | ========== ====== ====== ====== ============================ ================================= ================== 26 28 97.2 32 GTTCACTGCCATGCAGGCAGCTTAGAAA # Left flank : GCTGATTTGAAAAAACTTGATCTTAAAAAATGGTTAGATCGATTAACTGATTATGTTCACATCACTTCTATTCGAGAAGTCCCAGAGAATATAAAAGGTTATGCTATTTATAAACGTAAACAGGTAAAAACCAATGCTGAACGTTTGGCTCGACATCGTGTAAAACGTGGTGATATTGGTTTTGATGAAGCATTGGCTCGTTATAGTAATGTTGTAACAACAACGGATCTGCCTTTTATTCAAATGAAAAGTTTAACGTCTGATCAAGTATTTAAACTTTTCATAGAAAAGAAAAATGCTGAACAATCTGAAAGTCAGGTTTTTAGTACCTATGGTTTAAGTTCGGAATCCAGTGTTCCTGAATTTTGACCCAATATTTTTTCATTCTTTAACAGCTTAATAAAATCAATAGGTTATAAACGTGAGTTAAAACTTGGGTCTTTTATGGATTTTTAGGTTTAACTCACTGTTATAACTTTATTTTTTGCTATAAAATTACT # Right flank : ATAATAATGATCTCTGTACACGACAAATTTCATAGGGCCCTTGTCCTATCAGGCTTTTTCTTTCTTAAAATTGCTAGCACTTTCTTAAATTCTTCTTTTTTTCCAAAACCAATCAAACGTAGAATAGCCATCTGAACATAGTCCAAACCGTAGCGAAATAAACTTACTGAAAGTCGTCCATGCTTCTTTAGTTTTATCGCTTTTTTTCGATCATGTTGCCATTCACCTGTTAAATAGCACCAACAGAAACCGATCGCTAGCACTGCTATCAATTTCTTGACTCGTCTAGGGTCTGTTAAACGAGTATTTTCAAGATTGAATCCACGTCCTTTGAGACAACTAAATAAGGTTTCGATTTCCCAGCGTAATGCATAATCACCAATAGCAGAAGCATTAAACATAGGAGAAACAACAAGTAAAAGTTCTCCATCTTCTAATCGTAGCGCACTAATATACAGTTTCACTCGACCAACCCAAATACGTCGTTTACGACATTCTGT # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCATGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 2990722-2991649 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026412.1 Acinetobacter sp. ACNIH2 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2990722 28 100.0 32 ............................ TTTTACTCCTAGCACTCCAAATGTTAAGCGTA 2990782 28 100.0 32 ............................ TGCAGGGTTAAATGCAACAGCAGTACCATATG 2990842 28 100.0 32 ............................ TAACTCCATCCATCCTGCACCAAGCCACTTCT 2990902 28 100.0 32 ............................ TTACGAATCAGGTCAATACGCAGAGGTTTTGC 2990962 28 100.0 32 ............................ TGAACGATAATTTCAGGAAATTGTGTTTCTTG 2991022 28 100.0 32 ............................ GCAAAGAAAGGCGAGAAGGGCGACCAAGGTAT 2991082 28 100.0 32 ............................ ATAAAAAAAGTTTACACGCTCATCGGTAGCCG 2991142 28 100.0 32 ............................ TGATTCGTAAGGCATTCCTTAAGCTCCTGCAA 2991202 28 100.0 32 ............................ TTCCTATTGATTCTCTTAACCCACTGCAGAAC 2991262 28 100.0 32 ............................ TTAAGAATCTCAACCAATCCTGCGAACGTCAT 2991322 28 100.0 32 ............................ ACCAACAAATGGCTCAACCCATTTTGTAATTC 2991382 28 100.0 32 ............................ ATGAAGAATCAAAAGGTCAAGTTGGTCTATTG 2991442 28 100.0 32 ............................ GATCAGGGATGAATCAACAAAGCTATTTGTCA 2991502 28 100.0 32 ............................ ACTTCATAAAAGCCTGCTTTTGTAAAATTGTC 2991562 28 100.0 32 ............................ ATAATAAGTAAAAGCTATTTGATGCGTTCCTT 2991622 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 16 28 100.0 32 GTTCACTGCCATATAGGCAGCTTAGAAA # Left flank : TCGCAACGCTTAGAAAAATTGTATGAACAATATGATTCTGCGAAATCCGATGAAGATCGTAAATCAATTCAAGAAAAAATTAACCGTTATACAGGTAGTAAAGCTGATACAGGAAAAGATCGTTATATGACTGTAGGTGGTGGTCAAGAGTGGAATGAAAAGTCTGGAACTATGGTAAATAGACCTCAACAGTTATTTGATACACAATCTCAGCGGTTTATTGATACGCCACAAGGAAAAACTGCACAACGAGCTGTTGGTACAATTTCTAAAGTAGGCGACAAAACCGCTGTTTGGGATGGTAAGGACTGGGTTCAACAGTAATACGTAGTCACCTTCTGGTGACTATTAATTACATTGCATTTGCCCACCAATATTTTATGACTCTTTAATTGCTTAATAAAATCAATAGGTTATAAACGTGAGTTAAAACTTTGGTCTTTTATGGATTTTTAGTATTAACTCGCTGTTATAACTTTATTTTTTGCTATAAAATTACT # Right flank : AATCTAAAGATTATTTATATAACACCTAAACTGGTCATGGGAAAAAGCATAAAAATAAAGCGACCTAATTGGTCGCTTTTGTTCACTTTTTATATTGATAAACTATTTATAAAAGTGAAAAATAAAAATCTACTTTATAAACAGATGAATCTATTATGATTAATTATGAATTAATTTTTGAAGAACTCCATGCTATGCAACCCAAAGGAGTGAAATTTTTTAAAGATCATACATCACAAGAGTTTGAAGAATTAAATAACTTTCTAGAAGATAATCAATTTGAACTTGGAATAGAGATAAAACCCCATAGGGAGAGTCAAACTGGTCATCGAGCTATAGATGCAATTCTGGTTAAAAAGTTATGATTTTTTGGGCTGAAAAATTTCAAAAAGATACCCCACAACTTAGATTGTGGGGTATTTGTTTTACTTACTCGCTAAATATCTACCAGTTGTGAGTAATTCATTGCCATACACAAAATCAAGTAATCCGTCGAATTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACTGCCATATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [80.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //