Array 1 452120-450548 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJYBY010000002.1 Bifidobacterium pseudocatenulatum isolate LH_656, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 452119 33 100.0 34 ................................. GCCCTCGTACCCCCATACTGGTAGGATGTTGGTG 452052 33 100.0 36 ................................. ATGTCACGAAACTTGACCGTGAGATGGCATCGCGGC 451983 33 100.0 34 ................................. AACATTTTCCGTGAGGAAATGCGTATGGCATCCA 451916 33 100.0 34 ................................. CGTATTTCGCAATCACAAGGGACGACAACAAATT 451849 33 100.0 34 ................................. ATCATGCGTCTCACGGGCTTCCATGCCCTCGATA 451782 33 100.0 35 ................................. CGAGATAATAGCGAGGGGTATCAGCGTTCGAGGCG 451714 33 100.0 34 ................................. ATTCCGCATGCCGCTATTACGGACACGGCCAACA 451647 33 100.0 35 ................................. CGTCAGAACATTGTTCTTAGTCATCAAATCATTAA 451579 33 100.0 33 ................................. ATACGCAGCGCAAGGCGACTACCAGAACGCCAT 451513 33 100.0 33 ................................. AGTCGCGTGACGGTCAACAATTCCGGCGGATAC 451447 33 100.0 33 ................................. ATACGCAGCGCAAGGCGACTACCAGAACGCCAT 451381 33 100.0 36 ................................. GTTAGTCACCTGCGCTTTTTGCTGGATGAACTTATC 451312 33 100.0 33 ................................. AGTCGCGTGACGGTCAACAATTCCGGCGGATAC 451246 33 100.0 32 ................................. TGAAGGGAGCATGGTGATGACCGTGGCTGCCA 451181 33 100.0 34 ................................. ATACCATCCTCGTTAAGGGTGGCGTGGTCGAACA 451114 33 100.0 35 ................................. CCCGACAAGCGTAGGGGCGTGCACCGTTTTATGGT 451046 33 100.0 33 ................................. ATGCGACTCGCTACGCCGTGCCCACGTCTGGAA 450980 33 100.0 35 ................................. GAAGACGGGCCGTATGCCTCCGACTCCCGCAACAT 450912 33 100.0 34 ................................. ACGATAGCCATGGCGCTGCCCAGGATCATCGTCG 450845 33 100.0 33 ................................. AAGGCCGCGTCCGTGCAGGTGCAGGCAGCTCAG 450779 33 100.0 33 ................................. ACGCAGGTCAGCCCGATCCTCGACCGCATCCCC 450713 33 97.0 33 ....T............................ AGCTGGGAGCAGTGCGTTCGCGCCGTACAAGGG 450647 33 97.0 34 ....T............................ GATACGATTAAGATGATTTTCGAGCGTCGTATCA 450580 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ==================================== ================== 24 33 99.8 34 GTCGCTCTCCTCATGGAGAGCGTGGATTGAAAT # Left flank : CAATACCGATGAGGACAGCCTGCGCTTTTATAAACTTGGCGCTCGATATGCGGATAGGATTGAGCATTATGGACGTGAACGGAGTTTGCCGGTTAATGATGTGATGATGATATAGCACAGGCAAAATGGCATGGTGCCATAACGATATGGTGTGGGGTATGCTGGGTTGAGCGTTTGAGTGTGCCGTCCGGTATTCAGAGTGTGTTTTCTAGCCAGCAGTATTGTGTTTTCGGCAAGGTGGCCGGTCTTGGAATGGTGTTTGTGCGAAGTGTAAGCGCTCATGATAAGGGACGTCTTTCGCACCTGAAAAACTATCGAAATCCGAATTGTGATTTTCGTGGGGCGTTTTGAAAACTAAATAATGGACATTAAAATGAGACAGAAAGCCAGTTGCTCGTTTTAGACATGTTGTTCGTCGTATCGGCGGTGTTGTTTGATATGCTTAAAGCTAGGCAGCTGGCTTGCGTCTCAAAAAGCGGACAAAAATGTCCAGCTGCACT # Right flank : CGGTGTCTGCATCGTTCCGGCCGCCGCGTGGATGTTGCTTTCCCTGTTTATGTCCAGTGTTCCCCGCACATGCGGGATTCCACATGTGCGGGACTGCTAGCAACGGAAAACCAGGGTTTTTGTCCGCTCGGGGCGACTTCAACGGTAATACGAGCAGGAACTGCGACTGGGTGTTTCGCATGGGGTCGCTTCTGAAAGCTATGTAAAAGAAATAGTGTATGTGAAAACGGTCGGGTGGGTGCGGATGCACGAGAAATTGGCTAACCTGTCGAATTTCTGTTTTACTTTGGTCGTTCATCTCGTGAGTGGTCGTCAAGCTAGACATATTGTGTCTCATGGGATGCAACATGTCATATGGAAATACATATGACTGGCGAATATCGCCAATGGTTCAGCCGGATAAAGGACCGGAACGCGAAAGCCCGAATCAGCGCGAGACTCCGATTGCGCTTCTAGATGGGGCGGCCGGTGGGTGACCTGCATACGGTTGGTGACGGGGC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCTCCTCATGGAGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.30,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [41.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //