Array 1 24946-26195 **** Predicted by CRISPRDetect 2.4 *** >NZ_NBLB01000051.1 Escherichia coli strain Aut2013_WWKa_ALT_30 Cont051, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 24946 29 100.0 32 ............................. TTTCAGAAAAGTACGGCTCAATTGATCGCCCC 25007 29 100.0 32 ............................. CGCTGGTGGCGGAAAACAGCCAAAATAACGCA 25068 29 100.0 33 ............................. TGGATTAATCCGCGGCTGGCGATATCTCGCAGC 25130 29 100.0 32 ............................. CCCCTGTCGCCGTTGGCGGATTCTTTCCTGTA 25191 29 100.0 32 ............................. CGATAAACGCTCAATACCAGCCGGAATAATCG 25252 29 100.0 32 ............................. GCGGAATCTGCTGCGCACAAGTTACACGGCGC 25313 29 100.0 32 ............................. CCTTGATCGGATTCCAGAAACGAACCACTAAA 25374 29 100.0 32 ............................. TCGTTTAGTGTGGAATTTGGCGACGCGGAGCG 25435 29 100.0 32 ............................. TTTAGCTAATATTGGGCGGCTAACGTCATCAA 25496 29 100.0 32 ............................. GTTAAATATTGTTCACCATCATGGATCAGGAA 25557 29 100.0 32 ............................. CATGAACATGGACGATGAAAAAATAAGGGAGG 25618 29 100.0 32 ............................. AATTAAATGATTTTGATGCGCGCCGACTTGAA 25679 29 100.0 32 ............................. CCACGCGGCTGCATTCAGTGATATCCAGTTTG 25740 29 100.0 32 ............................. CATCTATTTATCTCGCCGCGATTGGCGATAAC 25801 29 100.0 32 ............................. CCGAACGGCTGGCGAAGCAGGTGGCTGGCGTA 25862 29 100.0 32 ............................. GTTTACCGCCCCGCAGAGGCGCTGGCAGATCC 25923 29 100.0 32 ............................. GGATGACCTGTCGCTAAAACTCGCCGCGTACA 25984 29 100.0 32 ............................. TCCGTTTGGTCCACCAAATGTTTGATGCTTCA 26045 29 100.0 32 ............................. TTCAGGGTGTGATTCCGCATACCAAGCAGTAA 26106 29 96.6 32 .A........................... GGCGCACTGGATGCGATGATGGATATCACTTA 26167 28 72.4 0 .AA........C..T....A..-.C...C | T [26186] ========== ====== ====== ====== ============================= ================================= ================== 21 29 98.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCTGCAGGTGAAATTGAACCACCACAACCCGCGCCGGATATGTTACCGCCTGCCATCCCTGAACCTGAAACGCTGGGTGATAGTGGTCACCGGGGGCGCGGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTGGAAGTGCGTGCCGGTGTGTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATTACCCAACTGGCTGGTTGCGGAAATGTGGTGATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGAGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTAGACGTTCTTTAAAAATAAGGAAATGTTTTAATTTAGTTGGTAGATTGTTGATGCGGAATAAATTTGTTTAAAAACAGTTATGTATGCTTAGT # Right flank : CAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAACTCCTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCAGTGCCTTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCTATTCCGTGACTGCGTGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACAATTAAGTTATCGAGATTAATCACCAGCAGCGTATTTTTCTTTTCGGTGTCACTCATCCGCT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //