Array 1 535596-533982 **** Predicted by CRISPRDetect 2.4 *** >NZ_BNEM01000002.1 Catellatospora sp. TT07R-123 sequence2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 535595 28 100.0 34 ............................ ACGGCACGCCTTTCTCCGTCTCCACGGGGGGCTG 535533 28 100.0 33 ............................ CTGTGCACCGAATGTGGGCGCGACCTAGAAGAT 535472 28 100.0 33 ............................ TGACGTTCTCCAGATCGTCCCCGACATCGGCGG 535411 28 100.0 33 ............................ CGACCACACCGGGCGCGTGACCGCGACCCGCTG 535350 28 100.0 33 ............................ GCGCTACACCCGAGGGACCGATGCTGAAGTGAT 535289 28 100.0 33 ............................ CATGTACTACCGGATCCCGGACGGTCCGCTGAG 535228 28 100.0 33 ............................ CCCGGTGGTGAACCCGAGGTTGCGCGCGTACTC 535167 28 100.0 33 ............................ GTCGCTAGTGATGACTGCGGGTGCCACAACTGT 535106 28 100.0 33 ............................ CAGGGTGACGTAGTCGCCCATGTCTCCGCTGTT 535045 28 100.0 33 ............................ CTGGAACGGCACGGAAGAGCAGGTGGCACGCTG 534984 28 100.0 33 ............................ CGCCCCCGGGAACAGGTCCCAGGGGCGTTCCGT 534923 28 100.0 33 ............................ CTCGGTTGCGTAGTCGCAGGGCGAGCCCAGGAA 534862 28 100.0 33 ............................ CCGGGTGTACCTCGGCGGCACCATGACCAACAC 534801 28 100.0 33 ............................ CCAGTCCGCCTTCGGCAACTTCTGGTCGGGAAC 534740 28 100.0 33 ............................ CGCCTCCCGGCGTGCCGCGGCACGGGCGTAGGA 534679 28 100.0 33 ............................ ACGGCATGACACCCGCACAGATTGATAGAGGAT 534618 28 100.0 33 ............................ CTCCATCCTCACCGGGTCCCTATGGGTCGGGGA 534557 28 100.0 33 ............................ GCCCGGGTGGTCGGCCAGCGCGGTCTGGAGGCA 534496 28 100.0 33 ............................ GGCAAGATCATGTTCTTCTCTGTCGCGGACATC 534435 28 100.0 33 ............................ CCTGCTGGATACCGCGCGGTACGTCGGCGTGTT 534374 28 100.0 33 ............................ GATGTTCATGGTCTTGGCTGCGACGTCCGCCGC 534313 28 100.0 33 ............................ CCTCCAGGACCTGAGCCGAAGCCTGGCGGGAGT 534252 27 96.4 33 .....................-...... CTGCAGGGCGTTGATCTGGTGCCAGCGCCCGCA 534192 28 96.4 33 .....A...................... CCGGTAGGCGGCAAGCTGTAGGGCTACCTCGGA 534131 28 100.0 33 ............................ CGGAACGCGCAAGGCCGTCGCGGACTGGCTGAT 534070 28 92.9 33 ...C....................G... CTGAACGGAGCGCCTGATGAACAACCTCCCGAG 534009 28 85.7 0 ...C.T.....G.A.............. | ========== ====== ====== ====== ============================ ================================== ================== 27 28 98.9 33 CTGTTCCCCGCACGCGCGGGGGTGATCC # Left flank : GGTCAGGCTGTGGGACGACAGCGGGATCGAGATCGCTTCCGGGCGGAACTATGCCGGTGCGGATGACGTGGACTTCTGATGGTCGTCATCGTGCTGACGGTCTGCCCGACCGGGCTGCGGGGGTATCTCACACAGTGGCTGCTGGAGATCTCCGCTGGTGTCTATGTGGGACATGTCAATGCCCGGGTTCGGGACCGGCTCTGGGGGAAGGTTGTCGAGATGGCGGGGGCCGGGCGTGGGCTGATGGTGTTTCAGGCGCGGGGGGAGCAGCGGTTGTCGTTTCTCGTACACGATCATCATTGGACGCCGGTTGACCTCGATGGCGTGATGCTCATGCTTCGGCCGGCGGAAGGGGTGGCGAACCCGGCGATGAGAGCGGGATGGAGCAAGGCGTCGCGTCGCCGCCGATTCGGCCGCCGTGATGCGGCTCCTGGCCATGACGCCGAATAGAAGTGAACGAAATCCGAGAAGTTGACCTACAGAATCCCAGGTGAATTAGT # Right flank : CAGTGAGTCCTAGGCCGCCGGTGCGTCGGCATATGGCAGCGGACAGCAGGAGTTCCGGAGTGTGCGGACACGAAGGTGAAGGCGTGTTGGAGTTGCGGATGGTGATTCCCCCGGTTGCGGTGCGCTGGTCGGTGACGGCGGCTACTGTCGGGGCATGGTGCAGCAGCGGCTCATCGTGGTCGATGAGCGGGTGTATCGGCCTGCCGGGTGGTGGACTCGACCTGCTCTGCATCGATGAACTCGGCTACATGGAACTCGACCGCCGCAGCGCTGAACTGCTATTCCAGGTCCTCACCGAACGCGAAGAGAAGAGCAGCGTCGCGATCTCCTCCAACCAGGCGTTCTCCAACTGGACGAAGACGTTCACCGCCCCCGTCTCTGCGCCGCGATCGTCGACCGCCTGACCTTCGGTGGCAACATCATCCAGACCAGGCACCGCCTCCTACCGCCTTGCCTGCACCCGTAGCCAGACGGCCGCCTGAACCGATGACACCAGCAGT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCACGCGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGTTCCCCGCACGTGCGGGGGTGATCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 551638-555994 **** Predicted by CRISPRDetect 2.4 *** >NZ_BNEM01000002.1 Catellatospora sp. TT07R-123 sequence2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 551638 28 100.0 33 ............................ CGGCCTGCAGACGCCGCTGGGTCACCTGTTCAG 551699 28 100.0 33 ............................ GTTCTCCACCTGATTCGGTTCCACCGGACCGCC 551760 28 100.0 33 ............................ CATCGTCTAAGAGGTGACTCCGCATGTCGTATG 551821 28 100.0 33 ............................ TCCTCACATCCCCTTAGAGGAAAGGTAAAGCTA 551882 28 100.0 33 ............................ GTCGGATGCGTGCAACATCGTCGTTCTCCTCTC 551943 28 100.0 33 ............................ GTCGGTAAGAACGAGCGCTGGCTTCGCGAGGCG 552004 28 100.0 33 ............................ GCCGGGCGCGGTGCTGGAGCTGAGACTGTCCGA 552065 28 100.0 33 ............................ GCGGGGGCGGCTCAGAAGGCAGTGGAGAAGCTG 552126 28 100.0 33 ............................ GTTTAGATGCCCGTTACGGATCTTGAGGCCTCG 552187 28 100.0 33 ............................ CTAAATCTATCGATACGTTCTGATCATGGTCTG 552248 28 100.0 31 ............................ CGCCGCAGAACGCCACCATCCGCCAGAAGCG 552307 28 100.0 33 ............................ CCATCCGGAGACTCCGGACATACGTCCGTTGGT 552368 28 100.0 33 ............................ GGAGGTGCTGCCCGCGTGGGAGCACGTCCAGGC 552429 28 100.0 33 ............................ CCACTGCTCGTTGCCGTCGAAGTCGCTGTGCCC 552490 28 100.0 33 ............................ GAAACCTGCGGCCGCCCCGGCACCAATGGACCG 552551 28 100.0 33 ............................ CGGGGGCAGGGGTAGGTAAGGGCATAGGTAGCC 552612 28 100.0 33 ............................ CACGTAACCGTGCCGGGAGCAGCGCTCGTAGGC 552673 28 100.0 33 ............................ CCGACCCGGAAGATCACCGACTTCGAGGTCGAC 552734 28 100.0 33 ............................ TGCTTCTTCAGTACCGTGTCCGGCTCCGGGAAG 552795 28 100.0 33 ............................ GCCGCGTGAGTGTCGGCACTGTGGGCACCCCGT 552856 28 100.0 33 ............................ CCTCGCCCGTGAGCGTGGCCTCGAACCGCTCCA 552917 28 100.0 33 ............................ CACCGACCAGACCATCACCCTCCAGACGGTGTC 552978 28 100.0 33 ............................ GGTCGTCCGGGCCTTGGGAGACAAGGACTTGTG 553039 28 100.0 33 ............................ CGGCCAGGCCCTCGGCGACCATCGCCTTGGCGT 553100 28 100.0 33 ............................ GCTCACCGCGTACGACAACGGGTACAACAGCGA 553161 28 100.0 33 ............................ GAGGTAGGCGGACTCGCACAGTGCTACTCCTGT 553222 28 100.0 33 ............................ CGCGTAGGCCCGCCAACGCAGCGGCGCAGGGAC 553283 28 100.0 33 ............................ CGGCTCGGCTACGGCGCCATGGACGACCGGGTG 553344 28 100.0 33 ............................ CCCATCCCCGCCCCCACATCGCCCGCCGAGGAC 553405 28 100.0 33 ............................ GATGATCGCCATCCACCGGGCGCAGGAACGTCG 553466 28 100.0 33 ............................ GTGGATACCGTCGCGGCCCGGCGACTGCCACCA 553527 28 100.0 33 ............................ GGCGAAAGCCCAGGCGGCCAGGCCCGGGCTCTC 553588 28 100.0 33 ............................ GCAGGCCGCCCACAAGCGCGTACTCCGCAGCCA 553649 28 96.4 33 ..................A......... CTTCGGGAGCGTCAGTCCATCCACTGTCATACG 553710 28 100.0 33 ............................ GGCGTTGCCGCCTTCCTTCACGACTGCCGGAGT 553771 28 100.0 33 ............................ CCAGGATTATGTGCGTATCGATGTCGTGGACGG 553832 28 100.0 33 ............................ CGAGATCCGCGCCTATCGGGACGCGATTGGAGA 553893 28 100.0 33 ............................ CTTCCTTGAGATGGTCGACATCAACGGGCTCTC 553954 28 100.0 33 ............................ CTGTCTAATGTGGGAAGTCGGCACAGGTCAGTA 554015 28 100.0 33 ............................ CGAGATGGTGAATCGCAAGGCGCAGCTGAAGCG 554076 28 100.0 33 ............................ CGTCGACACTGTGCTGTACACCCCTGAACTCCA 554137 28 96.4 33 .......................C.... GGGGTGCTGACCTGCGGAAATACAAGATGATCA 554198 28 100.0 33 ............................ CGATCCGAATGACCTTAAGACATTGACATCCCT 554259 28 100.0 33 ............................ CCCGAACCGGCCCTTCGTCCTGGGCGTGGTCGG 554320 28 100.0 33 ............................ CACCGCGGCGAAGTCGTCGACGGCCCTGGCCGA 554381 28 100.0 33 ............................ GGACGACCATGGCGGACGTCGCACCGATACGGA 554442 28 100.0 33 ............................ CGCGTTCGTCGACGCGATGGACGCCAAGCACAA 554503 28 100.0 33 ............................ CGAGGGAACACGTTTCCTTAGGCATCGATCACC 554564 28 100.0 33 ............................ CCGGGACGCCCTGGGCCGCCGCGTCCACCATGA 554625 28 100.0 33 ............................ GCTGTCCCGTTCGACGTCGGGGTACCGGGCCGC 554686 28 100.0 33 ............................ GTTGACCTTGTCGCCGACCGTAAACCCATGACC 554747 28 100.0 33 ............................ CGCCGTTTTCAAGCCCCTTACGGATGCTTGGGT 554808 28 96.4 33 ...............C............ CGCGGGCGGGGCCTTCCCGAAGCTGGAGGAGCT 554869 28 100.0 33 ............................ GCCCGCCGCCCGGCTAACTGGGGCGTCAGCGTG 554930 28 100.0 33 ............................ TCCATAGCGTCCCGGAATACGGTCGCTTGCTTC 554991 28 100.0 33 ............................ CTGACGTGGCCAAGTCGTGCGGCATCTGCCGCG 555052 28 100.0 33 ............................ CTGACGTGGCCAAGTCGTGCGGCATCTGCCGCG 555113 28 100.0 33 ............................ CTCGCCGACCTCACCACCATCCCGCAGCCTGTC 555174 28 100.0 31 ............................ AGGCGGTCCGGTCCCTCATGATCTGGCTGTC 555233 28 100.0 33 ............................ GCAGTGGGTGAAGGGCTGCGGCATCGCCCACAT 555294 28 100.0 33 ............................ GGACGAGGACTCGGCGCAGGCCGCCCTGTCCGA 555355 28 100.0 33 ............................ GTCGCTGTGCAGCAACGAGGACCCCGAGCTGTG 555416 28 100.0 33 ............................ GGCGTACCTTCGCCATCTGGAGCCGGTCATCCG 555477 28 96.4 33 .............T.............. CTAAAGGGCGGCCGTCTTCCCCGCGCGGGTCGT 555538 28 100.0 33 ............................ CGCCCAGGAGTTCTCGTTCACTGAGACCGAGGC 555599 28 96.4 33 ..........................T. AGTGGGGAACCGGATTCACCTCCGGTCTGATCG 555660 28 100.0 33 ............................ GACGTTCTGTCAGACGATGGTCGCCATGCTCGA 555721 28 96.4 33 .C.......................... TGAATCGGGTACGGGCATCGCTCACTCGACGAG 555782 28 96.4 33 ..............T............. CGCGCCCATCTCGGGGAACGCGTATGGCATCCA 555843 28 89.3 33 ...................A..AT.... CGCCAGCAGCAGGCAGATCACGATCGCGCCCAG 555904 28 96.4 33 ...........A................ CGGCGCCACTCAGACCTACAGCAAGCAGGGCGG GG [555919] 555967 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 72 28 99.5 33 CTGCTCCCCGCGCACGCGGGGGTGATCC # Left flank : AGCACGGCGCTGGCCCGGGTGCAGGCTGGGGACATCCTGGTGCCGGTGCATGCCCGGGAGGTCGCCGCGACTGTCGCGACGGCGGAGCAGGTGGGTGCCGCGCTCGACCCTGGCGTCCAGGCGGTGCGGGTCAATCCCGACCTGCTCGATCCGTGGTTCGTGGCCGGGATGCTGTCCAAGAGCGACAATGTGCGTATGGCCGGGCGTACGTCGAGCAGCAGCACCGGTGTGATCCGGATTGATCTACGCAGGCTGACGATCCCTGTCATGCCCCTTGAGCAGCAGCAGCATCGGGGCGCCGTGTTTCAGCGGGTGGCAGCCTTCCGCACGGCCATGCTCCGAGCCGGGGAGGCCGGCGATGCACTCGCCCGAGGTCTGAGCGATGGGCTGGCCTCCGGCCAACTGACGGGAACACCTTAAGAGAGCCATTGATAGACTCTGCCACAGAACAAGTGAAGAAAATCGAACACAATGATCTTCAACGCCGCAGGTGAACAAGC # Right flank : CAACTTAGATCACGTGGAGAAACGCACCAAGTCGATGACGGGGTGCAGGCCACTCAACGGTCCTTCAACGCCGGTTCCTTCATCTATCCGACCACGGCCGCGGCATGGAAGACGATCCCCTCGTAGGAGGTGGTCGCCGATCAGGACGAGGCGATCCCTCCCGCGTGCGCGCTGGATATACACGTCGGCTCCCGATCCAGGGCGCGGTAGCCCGTAGGCCACGGTCCGGTCGTCGCGCCACCCGCCCGGGCGGCCTCCGGTCCACCGTGGACCGATCTATGCTGTTGACCACCGGACCGCAGCAGGCGGCCGCGTAGCAGCCGCGGAGGAGCCCTTGACCGAGCTGGCGAGGGCGGGCGGACCGAGCATGGACACCGGACGTCTGCGGGCGGACCTGGTCCGGCTCGTCGCCGCCGAGGCCGTCTCCAACATCGGCACCCGGATGACCTTCTTCGCGGTGCCGTGGCTGGTGCTGGTGACCACCGGCGACCCGGTGAAGG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCATGCGGGGGTGATCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C/E [Matched known repeat from this family], // Array 3 1669668-1673899 **** Predicted by CRISPRDetect 2.4 *** >NZ_BNEM01000002.1 Catellatospora sp. TT07R-123 sequence2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1669668 28 100.0 33 ............................ GACGCGGCGTCCCCCGTCGCCGCAGGGCCCGCC 1669729 28 100.0 33 ............................ GTTGTGGCCATTCAACCCGGGCGAACATTACGC 1669790 28 100.0 33 ............................ CACCAGCCCGCCGAACCCGTCACGGGCGACACG 1669851 28 100.0 33 ............................ CGACACGTACCCCAATGCCTATCCGGGGTATGT 1669912 28 100.0 33 ............................ CGGGCTCGTGTTGATGCTGTCACCGGAGTGCCG 1669973 28 100.0 33 ............................ CGTGAGGCACCATTCAACGCCCGTTATCTCTCA 1670034 28 100.0 33 ............................ GTACCTCGCGCGTCAGCCGACGACACCTGATGA 1670095 28 100.0 33 ............................ CGTGATCGCGAACCGCCGCCGGGACAACTGGCG 1670156 28 100.0 33 ............................ CGCCCCGGAGGACCCCAGCGACTGGGAGGAGTC 1670217 28 100.0 33 ............................ CAGGTCCTCCACGGCACCCTCACCCAGCCACTC 1670278 28 100.0 33 ............................ CATGACGGTCAACTCGGCCGAGGAACGGGCGGC 1670339 28 100.0 33 ............................ CCCTCAGGCAGTCATTGCCGTGGAAACCGACGC 1670400 28 100.0 33 ............................ GACTATCCGTGCTACCACTGCGGAACAGGCGCA 1670461 28 100.0 33 ............................ CGGAGAGCGCAATGGAAAGCGGAGAAGCGGCCA 1670522 28 100.0 33 ............................ CGTGATCTGCCGCGTGGCGACGCCGGAGACGGT 1670583 28 100.0 32 ............................ TGGGCCAGCTCGTCGCGCACCTCCTTCTGGGT 1670643 28 100.0 33 ............................ GTCTAGGCATTCCCGCGTACCTAGACTTGCTCC 1670704 28 100.0 33 ............................ GCCACCACAGCGCGATGGCGTGCCCGCCGACCA 1670765 28 100.0 33 ............................ AGCGCCGGAACGCTGTACCGCCGATACGCCCGT 1670826 28 100.0 33 ............................ TATGATGCTGCGAGATGTTGACGTAAAGACGCT 1670887 28 100.0 33 ............................ CGGTTACCAGCTTTACCTGATGAACAAGTGGGG 1670948 28 100.0 33 ............................ CGCCATCATGATGCCCAGGGCCGGGCCGCGGCG 1671009 28 100.0 33 ............................ CGCACAGGTCACCATGCCGGACTCTATGCGGTG 1671070 28 100.0 33 ............................ GTCATCGGGGACGGCTGGCTGATCTACGACCCG 1671131 28 100.0 33 ............................ GTTCGATCCGACTGAGCGCATCACCCAGGGCTG 1671192 28 100.0 33 ............................ GGTATGCCCAGCCCAGGCCGCGCGCACGTGGCC 1671253 28 100.0 33 ............................ CAGCGCACCCCCGCCGGTAGACCCTGCTAAGCC 1671314 28 100.0 33 ............................ CATCGACTGATGGGGGCCGCGCTGTCGAGCACG 1671375 28 100.0 33 ............................ GCTTGCCGCCCAGGTGGCCGGGGTCGCGGACCG 1671436 28 100.0 33 ............................ CGACCTCGGCGCCGGGGCCACGCCGGAACAGGT 1671497 28 100.0 33 ............................ CCAGGCCGCCTCGTCGAACACCGTCTTGGATCC 1671558 28 100.0 33 ............................ CCCGGGGCGCTCGTAGGAGTTGCAGCAGCGCAG 1671619 28 100.0 33 ............................ CGACTCGTGGAGTGCGGCGAGGTCGGTGCGCAG 1671680 28 100.0 33 ............................ CGAATCCGCGGTCGGCACCCCCGTGACGGTCGA 1671741 28 100.0 33 ............................ TCCGCCCTGCGGGTACCAGCGCAGGTGACCGGC 1671802 28 100.0 33 ............................ CGGCTGGACCGTCCAGCCGCACAAGGCGCCGCT 1671863 28 100.0 33 ............................ GTTGTACCGGCCGCCGACGTCGTCGCGCCGGTC 1671924 28 100.0 33 ............................ GTCGGGCGATGGGTTGGCGATCGCCGGGATGCT 1671985 28 100.0 33 ............................ CGCCGCCGTCGAGGTTTTGAACTGGTGCGCCGA 1672046 28 100.0 33 ............................ GCGCTTCGGGCGCGACCGGGCGCGCATGCTGGC 1672107 28 100.0 33 ............................ CGCCGCCGTCGAGGTTTTGAACTGGTGCGCCGA 1672168 28 100.0 33 ............................ GCGACCTGATGGAGCTGAACGGCTGGGAGTCCC 1672229 28 100.0 33 ............................ GACCCCGTTCGACCTGATGAAACTGCCCGTCTG 1672290 27 96.4 33 .....................-...... CTCGACCTGCTTGCGGAGGCCTTCGAGTAGGCC 1672350 28 100.0 33 ............................ CCACCTCATGATGGTCGGTCGGCTGGAGCTGGC 1672411 28 100.0 33 ............................ CTCGCATGCCTGCGAGGGGCGGCCGAGCTGGGG 1672472 28 100.0 33 ............................ GGTCTGAAGGTTCACGTCTTCGACGGTCAGGTT 1672533 28 100.0 33 ............................ TCCGCGGGTACTGGCCGCTGATGGTCTTCCAGA 1672594 28 100.0 33 ............................ GCGCTACCACTCCCAGTACGGCGGCACCGACTG 1672655 28 100.0 33 ............................ TTCGGAGTACATCCGGAAGTTCGTGACGGAGAA 1672716 28 100.0 33 ............................ GCCGCGGATGTCCCCCGGTCATCTGTTGAAGAT 1672777 28 100.0 33 ............................ CCGTCCGGGCTGTAAACAGTTCCTTCGGGTCAC 1672838 28 100.0 33 ............................ CGCCGCGAAGCAGACGCGCTTCAACCGCGACCG 1672899 28 100.0 33 ............................ CGAGCGCGACGGGTTCAGCGCGCGCGGCATCAT 1672960 28 100.0 33 ............................ CGCCACCCGAACCATCCGTCACCCATCCGTCAA 1673021 28 100.0 31 ............................ GTCGGCGATGGTGCGCGTCACGCACCCCGTT 1673080 28 100.0 33 ............................ GGGCCAGGCCGAGACGCAGGCGGTCGCGGTTCA 1673141 28 100.0 33 ............................ GTGGATGCCCGTCGACCAGCTGCACGTGAACGC 1673202 28 100.0 33 ............................ GTGACGAGACGCCCCCGTCCGACCCAGATCGAC 1673263 28 100.0 33 ............................ GTCGGGCCGCGTAAGCCCCCGAGCAGCACCAGA 1673324 28 100.0 33 ............................ CTGCGCCGTGCCGGACGTGCCGCCGGCCGCGGT 1673385 28 100.0 33 ............................ TCGGCCGGGCTCATGGCTGCGCTGGAGCTGGAG 1673446 28 100.0 33 ............................ CCCTTCTCCTCCGTCTTGCGGAGCTGGGCCGCG 1673507 28 100.0 33 ............................ CGGTGGCACAGATGACAAGCAAGGCGGAAAGAC 1673568 28 100.0 33 ............................ GTCACGACGCTATCGATACAGCTATGACGGCGG 1673629 28 100.0 33 ............................ GGAGGACGCGCCCTGGAGCTGGATCCAGTCGTT 1673690 28 100.0 31 ............................ CCGGCACAACATCATCCGTGGCCTGGTTCGT 1673749 28 100.0 33 ............................ TGGCCTATGGGTGGAGAATCCTAGCCCGAAACC 1673810 28 100.0 33 ............................ CGCTCAGTGGCTCGCGTCCGGGGTCGCGTGGCT 1673871 28 100.0 0 ............................ | C [1673876] ========== ====== ====== ====== ============================ ================================= ================== 70 28 99.9 33 CTGCTCCCCGCGCATGCGGGGGTGATCC # Left flank : ACCGGATCGGCGACAAGTGGTCCGTGCTCGTGGTGGCGACGCTGCACGGGGAGCGGATGCGGTTCACCGAACTGCTACAGCGCATTCCGGGGGTATCGCAGCGCATGCTGACCTTGACGCTGCGGCATCTGGAACGGGACGGGCTGGTCGGGCGTACGGTCTTCGCCGAGGTCCCGCCTCGGGTCGAGTACGAGCTCACCCCGATGGGGCGCACCCTGGTCGAACCGGCGGTGATGCTCGCGGAGTGGGCGGTCGAGCACAACCCGGACATCGAACGCCACCACGAGGCGTACGACTCCCGAACTGACTGAGCCCGGTCTCCTTCGAGCAGCGTGGTGGTGCACGGGGCTGCCACTGCCTATGCTTCGTACGTGGGTGAGCGTGCAGTCCGACGGTGTAAGCGAGACCTTTCGGCGACTCGCGTTGCCAGGGCGCGGTCGACGAGAATGCAAGTGAACGAAATCCTCCTTCTTGATCTCTAAAGCACCTGCTCAAGAAGT # Right flank : CGCGAAGCGGCTCGGCCAGGGTCCCCACATCCGTCGTCGACGAAGTCCCACGCCTCAGACTCCCGGGCAGGCCGCCCCGAAGTGGCAGAGGTGCGCCAACTTACTCACTTGGCGCACCTTCGCGGGCTTCCTGCTTGTCGTCCACGACTTTCTCGGCGACCGGGTTCAAGCCCATGGAGGCAGAGTTCTGCTTGCGGCCCGAGACGCGCTTCGAAACAAGCCCCCACGGGTCGAGCTTCCAGACCGCGACGCCAGCCGCCACGCCGACGGCACCCACAGCAACGCTGATCGCCACGCCCTTCTTTAGTACGGCAGTCACGTTTGGCTGCTGGGCTGCTGTAACTCGCGTCTGCGGTAATGACTGGTTCGGGCGAGGGCTTGGTGTCGGCGTCGCCAGTAGGACCAGCGCAGCAGATGGGCGATGTCGGGTGGTCGGTGGTACAGCGCGTTGATCAGGCGCCGGGTCTCGGCGACGGTCAGGGCGACCATCTCGCTCGTGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCATGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCATGCGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C/E [Matched known repeat from this family], //