Array 1 1352467-1350715 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012719.1 Streptococcus anginosus strain J4206 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1352466 36 100.0 30 .................................... TTTTCATGACAGAAAGAATGATAAAGTTAT 1352400 36 100.0 30 .................................... ATATTTTACGGCAAAAACGCAAAAAAGTAA 1352334 36 100.0 30 .................................... ACGCAGCATAATCACCATGTGCAATTGTTG 1352268 36 100.0 30 .................................... TTGTTATCCCAAGAACCTATCTGGGTAGTG 1352202 36 100.0 30 .................................... AACGTGCTATTATAGTATCATCAAGAAAAC 1352136 36 100.0 30 .................................... CAGTTTCCATGTATTCCTGGACAGGATTGT 1352070 36 100.0 30 .................................... TGGCGCGTGAAGAAGAAAGTAAAAAGGGCA 1352004 36 100.0 30 .................................... TGGCAAGCATTCGAAATCATAGATTAGCGA 1351938 36 100.0 30 .................................... AAGATAAAGAACTAAAAAAAGCTATGAATT 1351872 36 100.0 30 .................................... AGGTAGTGGAGATAAGTTTACTGTATCTAA 1351806 36 100.0 30 .................................... ATGATAAAAAACGTAGTCGATTTAAAGATT 1351740 36 100.0 30 .................................... AAGATAAAGAACTAAAAAAAGCTATGAATT 1351674 36 100.0 30 .................................... TATCCAGATGGTACGACTGTAGAATTTAGC 1351608 36 100.0 30 .................................... TGCCCTTTTATTTTTAAAGAGGAGTTCTTA 1351542 36 100.0 30 .................................... TCCGCGCTGTTCTAAGAATCGAATTTGTTT 1351476 36 100.0 30 .................................... TTAGCCTGATTGAGCTTTTCCTCACCTTTA 1351410 36 100.0 30 .................................... TATAATAGTGTTGTGAAATTTATAACTAAA 1351344 36 100.0 30 .................................... TGATTTCCAAAGAGCAAATTGCTCACGATT 1351278 36 97.2 30 .....................A.............. ATTGTGACACCGAAAGCAAATGCCGTCTAT 1351212 36 100.0 30 .................................... ATCTTATTTGCTAGATTCCATTTACTACCT 1351146 36 100.0 30 .................................... CACAAGGTAGCTTAAAACGTAGGCATTGGT 1351080 36 100.0 30 .................................... ATGAAATGTATTATGAATTTTATTGAGCAT 1351014 36 100.0 30 .................................... GACTGCGATTGAGATGCTTGTTCTAGCTGT 1350948 36 100.0 30 .................................... AATACTCGGTTTGCGCGTGGGGAATACATA 1350882 36 100.0 30 .................................... ACAAGCGATTGAATCGATTCTCTTAATTTA 1350816 36 97.2 30 ................................G... AGCCGGCCAACTTTACAAATACAGTTAATG 1350750 36 97.2 0 ...........................A........ | ========== ====== ====== ====== ==================================== ============================== ================== 27 36 99.7 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : ACAGTTGAATGAAAAGCCCGAAGTGAAATCTATGTTAGAAAAATTAGTTGCAACTATTACAGAACTAATTGCTTTTGAATGTTTAGAAAACGAGCTGGATTTAGAGTATGATGAAATAACAATTTTGGAATTGATTGATGCTTTAGGTGTAAAAATTGAAACACTAAGTGACACTGTTTTTGAGAAAAGTTTAGAGATTGTTCAGGTGTTTAAATATCTTTCTAAAAAGAAACTGCTTGTCTTTGTGAATATGTCATGTTATCTGTCTGAACATGAACTAGCTAAATTGGTAGAATATATTCAACTTCATAATATAAATGTACTGTTTGTTGAACCAAGAAAAGTATACGACTTCCCTCAATATGTAGTGGATGAGGACTATTTCTTATCTTGTGAGAATATGGTATAATATTAACAAATATAAGGAATCGTTCGAGCTGAAGTCTAGCTGGGACGAATGGCGCGATTACGAAATTTCGAGACAAAAATTGGTCCACGAG # Right flank : ACAATACATTTTAATCATAGGGCTTGCAAATTTTTCCAATCGTGTTATAATACTTTTTAGAGACATATCACCTACAGGAAATCTTTCAGAGAGCGTGTGGAGCTGGGAATCACGCAGAGGATGTAGCTGGGACTACTCGATTTATTTTTATGCAAACATAAAACGGTGGCTACGTTAGAGCCAATCAGAGGTGTCAACAAACTTTTTTGTTGTACATGAATGAAGGTGGAACCACGTTGCGACGTCCTTTTAGGATTGCCGCTTTTTATTTTGTCGGAAGGAGGAAGAGTTATGCTCTATATGATTGGTGGATCGCCTTGCAGTGGGAAGTCAACAATTGCCTCCCTTCTTACTCAGCAGTATGGGCTGCTTCATATCAAGTTAGATGATTTGACAGACCAGATGATGGATCAAGCAAGAGCGAACGCAAAGCCGATTTCCCTTCTGAGACAGGACAGAAGTCCGGATCAAATCTGGCTGAGACATCCAGAGGAGATGGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //