Array 1 35475-35704 **** Predicted by CRISPRDetect 2.4 *** >NZ_VMMF01000027.1 Streptococcus sp. 959 959_S11_L001_R1_001_(paired)_contig_27, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================== ================== 35475 35 100.0 30 ................................... CAATTCGAACACTCGTAACTCATCACTCTA 35540 35 100.0 30 ................................... CATACAATTGCCACTTTTTAGCTTTACCAT 35605 35 100.0 30 ................................... TCCCTCACGGACGAGTCTAAAACGCAGCAG 35670 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ============================== ================== 4 35 100.0 30 GTTTTATCGGTCACAATTTTGGAGACTACAAAAAC # Left flank : AAGCAAAAATAGGAAAATTGGCGAAGAAACTTCAGTTTCTAGGAAATTTTATCTTTTTTGCCAAGTACTTAGGCCGTGTTCAATTGAACAAATCTTGATAATGAAGCTACTCTATCGGGTAGCTTTTTTGTATGGATTTTAGCCCGTGATCAAATCAGCTCTCTGACCTCAGAGGGCTTTTTATTCTGTTACCTTACCTCGATATACTCAAGTATAATCTTCGGTTACGGTTCCTAGCACTGTAAGGTAAAATAAACCAGATATTCTCCCTTCGGGGAGATTTTTTTGTTTCACTAAAAATTTTGTACAATCTTCTCCTCATCTCCTAGTCTATAAACGGTTTATCCAGCAAGAATCATGATGCTAAGGGCTCAAGAAATCTGTATGAAAATAGGGAAACGACACAGTGTTCGATGAACATAAGGAGTTTCATCTTTTTCACTAGGATTTTAGCCCGGGCTCAAATCAGCTCTCGGACTTCAGAGGACTTTTTTATTGAG # Right flank : CCTCAAATGGTACCATCTAATTACACCATAAAGGTGCGCAGCTACTCGGCTTGAAAAGCCTAGTAGCTGTCTGCAAGCCCCCTCGGAGAGCCCACACTTTACGAAGTAAAGTATAATATGTTATACTTTACATGGAAGTAGTCATTGAATTTCAGTTAGAAATTACTTTGTAACTACGTTTTGAGGAGGAGTAAAATGCTTTCCTACGTTCGGCATTACCCACTAGCGATAGCTAAATTAATGTGTCTGTGCTCTCCTAAAATCTGCTGATTTATTACTGACTAATACAGGAGGTTTTTATGGGACAGACAATCATATCTGCTATTGGTGTTTATATTTCTACCAGTATCGATTATTTAATTATTTTAATTATTTTATTTGCACAGCTATCACAGAATAAACAAAAATGGCATATTTATGCGGGGCAATATCTAGGCACAGGCTTACTTGTAGGGGCGAGTTTAGTTGCTGCTTATGTCGTTAATTTCGTGCCTGAAGAA # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCGGTCACAATTTTGGAGACTACAAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.71%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.20,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //