Array 1 131859-124584 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACZDH010000015.1 Bifidobacterium dentium strain 898B Contig_15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================================================================================= ================== 131858 36 100.0 37 .................................... AGAATTCTTCGAGCGCCGTGACCTCGCCACCGAGATA 131785 36 100.0 36 .................................... GGAAATACGGCGTCGATGATACCTTGGAGCGTGCCA 131713 36 100.0 36 .................................... TAGTCAACAGAACCATCCATCCGCCAAAACCTCAAA 131641 36 100.0 35 .................................... TGGACGTCGGATAGTACAATAGGTGCGAGAAGACA 131570 36 100.0 35 .................................... ATGCCGGCCAGCCATGACCAGTCGCCTATGATCCA 131499 36 100.0 34 .................................... GATAGACTTAATCATATGACCGAACTAATCACAT 131429 36 100.0 37 .................................... ACCGACCAAATCACCATCAGCAGCCGACACAACGACG 131356 36 100.0 36 .................................... GGGTGTCCGTGTCGAGCCATAATTCCGAGCTCTCCC 131284 36 100.0 36 .................................... CCGATCTTCGACGAGCATTATCGGACGAAACTCAAC 131212 36 100.0 37 .................................... TGGAGCAGTCACCATAGCCGGAGTGGAGCGGATCCAA 131139 36 100.0 36 .................................... TATGACCTGCACGACCTTCTCACCCGCAATGCGCCA 131067 36 100.0 36 .................................... GCACCACGATTAGCTCGATAATAGTCAACAGAACCA 130995 36 100.0 35 .................................... AACCTCTTCGGTGGGGTCAGGTTCCTTCGGCTGTG 130924 36 100.0 35 .................................... CTGGTCGCCATGAACGATTACGATTTTGACACTCC 130853 36 100.0 36 .................................... GGGCTTCTGCTTACACACCACAATCAAACCCGATAA 130781 36 100.0 34 .................................... ACATCGTTCCTATCCGAAAGGATAGGCGCGTTCA 130711 36 100.0 34 .................................... CTTGAAGCGTTACGGTTCCACTTACGAGCAGGCC 130641 36 100.0 37 .................................... ACGTCGATGGAGTTCGCCTTTTCCGCCAGTGCGCCAT 130568 36 100.0 37 .................................... GTGCTTGCCGCTTCCGTCTCATACAAATGCGCGTCGC 130495 36 100.0 37 .................................... TGGGCGACCCAGAGCGCACAGTTCCTGCGTACATCAC 130422 36 100.0 38 .................................... ACGCAACAACAACACCGGATACGAAAACGGCAAGGCTT 130348 36 100.0 34 .................................... GTCAAAAAGTCGGATGACGTGGTGAGACGACTCA 130278 36 100.0 35 .................................... AACAGCGGATCAAGCGCATGCTCAACCTGCTCGTC 130207 36 100.0 36 .................................... CGTCGAGGAATTCATGCACCGTGTGGAAGACATCAT 130135 36 100.0 35 .................................... GAGAGTTTATGCTCTGCTTAAGGGCATGGAATTGG 130064 36 100.0 35 .................................... TACAAGGAAACAACGACATGCCAAACGCACAGGAA 129993 36 100.0 34 .................................... TACACAGCATACCGGACACTACAATCTGCCGACA 129923 36 100.0 35 .................................... TCATATTGCCATTATATCACTCGTAACCAATGCCC 129852 36 100.0 36 .................................... GTAGAGCCGTAACGCTTGAGCGTGCGCGGCGAACCA 129780 36 100.0 34 .................................... ATTTTATCGACTCCACCGGTCGATAAAAATAACA 129710 36 100.0 35 .................................... CTACCGACCTGAAGATATCCAATCCGACACGCTCA 129639 36 100.0 36 .................................... AAACACAGTGGCTCATGGCATGCGACAGCAAAACAC 129567 36 100.0 35 .................................... TTCGCCACCGTGCAGCCATTCAGCTACCGTGACAC 129496 36 100.0 37 .................................... ATAGTTTGCGTCACTGTAACTGCCGTCTGTCTCGTTT 129423 36 100.0 36 .................................... TCCTTGATGCCATATCGTTTCGCGGCGAACGTTTTA 129351 36 100.0 36 .................................... TATCCACCATCAATCCACTCCCTACAGGTAAGCCGG 129279 36 100.0 35 .................................... ATCTGAGAAGTTCGACATGTCCGGAGGAATACCGT 129208 36 100.0 34 .................................... ACCCCATGCGAGTAGGGTGAGGATCATGTAGGCG 129138 36 100.0 35 .................................... CGCGAATTGGCAGTGTTCGGCGCTCGGGTCGATCA 129067 36 100.0 36 .................................... CCAACTTGACGTGTGGCAGTCGTTCCAGCACGACAT 128995 36 100.0 36 .................................... CCAACTTGACGTGTGGCAGTCGTTCCAGCACGACAT 128923 36 100.0 35 .................................... CCACTCATCGGCAAAAAAACCGTCTACATCGACGA 128852 36 100.0 37 .................................... TTGGAGTGAGGCTACTATGCCTTATCAGGTGGCGGTG 128779 36 100.0 36 .................................... AATACCGTAGACCGGTGGCAGGATCGGACAAAAGTC 128707 36 100.0 38 .................................... TCATACCCAAAACAAGCATGATAAGAAAACACAACACA 128633 36 100.0 35 .................................... GCACATACTTATCGCCACGAACAAAACCTTCAGAC 128562 36 100.0 36 .................................... TCGATGCTGGTGCCGTTGAGGCAGGAACATTGGACC 128490 36 100.0 35 .................................... GGCTGGAAGTCCTGCGTGGAAGTCTTGACGGAGAA 128419 36 100.0 35 .................................... TCATCCGTAACCTCGACGCCATGACGGAACCGCTC 128348 36 100.0 35 .................................... TTATGTCAGGACGGTGATCATGGGCAGACGCAATA 128277 36 100.0 38 .................................... GCCGGTATTACAGGATGAGGTGACGAATGCAGAGCAAA 128203 36 100.0 36 .................................... CGGCATCGAATGGAACGACACCACTTCGGGCGGACT 128131 36 100.0 37 .................................... AAGTATGCGACATTCGAGGAACCGCAAAAATGGAACC 128058 36 100.0 35 .................................... ATACTGATGATTGGTCGGAACATCCTGAGCGACAA 127987 36 100.0 36 .................................... GGGAAAAGCCGCAGCGTCGGGTCCGATTTTCCGGCT 127915 36 100.0 36 .................................... GTGCCGGATGACCCGCGTGAAACCGTATATTTCGAC 127843 36 100.0 37 .................................... TTTCAGTAGTGCGACGCTTCCTGTTGTGATGAGGATG 127770 36 100.0 36 .................................... TTGTTGACGGTGTACTGGTATCCCCAACGGTGGGTG 127698 36 100.0 36 .................................... GTCGAATTGCGGCAAATCATGCTCGAGGACTCAGTA 127626 36 100.0 35 .................................... TTTCCTAACAGGTTTCCGATGATGAGGACTCAGTA 127555 36 100.0 38 .................................... TGGACGCGGTGGCGGTACTGTCCTGCTGTGTGCTCGTA 127481 36 100.0 37 .................................... ACCGCATTAATCAACCAGTGGAGTCTCTGCCACACAA 127408 36 100.0 34 .................................... TGGTATTGGTGGCATGGTTCATTGACATGATCAA 127338 36 100.0 35 .................................... TCGGCGAATGGTGCCAGGAAGTCGCTCACGCCGAG 127267 36 100.0 35 .................................... ACTGCACGATACGGCCGCTCCCGCGCATTGCAAAA 127196 36 100.0 36 .................................... GGGCTTAACTTGTACGGCGACAATGACCCCGCCGAC 127124 36 100.0 35 .................................... AACCCGCTACGCATGAACGCGAAGTGAGCTGACCA 127053 36 100.0 36 .................................... GAAAACGTCATTGCAGGCATCAACGCCCAAGTGCAG 126981 36 100.0 35 .................................... ATTGGGAATGAACCGGTATCAAGGATGGAGGGATG 126910 36 100.0 36 .................................... GGAGACAACGGCGCAGGCAGCAAACAGGTGGACCAC 126838 36 100.0 36 .................................... CGGGATATCGTGAAATGGGACAGACAGGCACAAGAC 126766 36 100.0 34 .................................... ATTTCGACTGTGGCCGGTTTCATCGCGTCCGGTC 126696 36 100.0 35 .................................... TCTGAAACTCATCTTCTTTTATTTTTGGCCGAAGA 126625 36 100.0 36 .................................... TGTTCCTCGTTGGTCGCGATCTCGCTGATCAGCCAG 126553 36 100.0 36 .................................... AGTATATGATACCTTTGGTATCATCGCAAGTCGGGC 126481 36 100.0 35 .................................... GCCATTAAAACAATGACCTATATTCTTGGAACATG 126410 36 100.0 37 .................................... TACATGTCGAACAGGCTGCTCATCTGCCGTTCCGCCT 126337 36 100.0 39 .................................... GTCAGTGAACACCAAGTCGACTGAGCCATACAATCAGAA 126262 36 100.0 35 .................................... GGCACGATCACCGGCAGCGAGATCAAAAGCCGGTC 126191 36 100.0 35 .................................... GTGGACTCCGACGTAGCCAATATCCTCAACTGCTA 126120 36 100.0 36 .................................... TGCTCGCAGTTCTCCTCCGAGAATACACACCAGCCA 126048 36 100.0 39 .................................... GTGGAGGATGCGGGATAGCCGCCCGGAATGATCGAACTG 125973 36 100.0 34 .................................... GACAATCCGACCCGCTGGCAGAGCATCGGCAACA 125903 36 100.0 35 .................................... TGGCAGAAAGTCGTGAAATAGTGCCGCCGTTCCAA 125832 36 100.0 35 .................................... TGCGCGGATTTCACAGACGCGGTAGTCGATTTCCC 125761 36 100.0 35 .................................... TCGTGGGAGTTGAATCAGGATTCGGATGTCACCAA 125690 36 100.0 34 .................................... TGGCGGCTGCACATGCCTTTGATCGCGGCTATTG 125620 36 100.0 36 .................................... TCACCCTATGGCGGCACCCTTGAGAATCTGACCATT 125548 36 100.0 36 .................................... AAGCACCGGCTTGATAGTCACCGGTTTGTCGTTGCA 125476 36 100.0 38 .................................... GCCTCGCTGCGTGACAGCTGCTTCGCACAGCTCCGGTG 125402 36 100.0 35 .................................... TTGACGACGGATACTCCCGCCGATAATGTTGTGAC 125331 36 100.0 35 .................................... AGTTTCGCGTCGGCCACCGGCGACATGTACCTGCG 125260 36 100.0 35 .................................... GATTGGTACGAGTTCGGCGGACGTTGGGACGACTG 125189 36 100.0 35 .................................... ACGGACCATTTCAAGGGCAAGGTCGTGCTGTGCAA 125118 36 100.0 38 .................................... ACAAATTACGCGGAGTGGAGCAAGCAGAATCGTGTCCA 125044 36 100.0 35 .................................... TGGTTTTCGAAGATGCTTCCGTAGGCGGTGGTGGT 124973 36 100.0 35 .................................... TAGATGTTGGTTGAGGATTGCGCGGCCACCATGAG 124902 36 100.0 35 .................................... TTCCACGCTTGCGGGCATGAGCACGTAGCCGGGTG 124831 36 100.0 36 .................................... AAGCCCTTAGGATTCCACGAATGGCTCCAAGGCCAA 124759 36 100.0 103 .................................... ACGTATTTCCCGTTCATGGGCACCCTGAACAAGATGTTTCTGAACGGCAATGCTCAGGTTTTCTGGGACCGACCGGCGTGCAGATTGCGTGCGTCGTGGTCAA 124620 36 83.3 0 ...........T.GT........CT.........A. | C [124618] ========== ====== ====== ====== ==================================== ======================================================================================================= ================== 101 36 99.8 36 ATTCCTGAGCAGTAATGCTCAGGACTTCATTGAGGA # Left flank : CGCTTATGATATCAACGATGATCGCCGGCGTAGTCATGTGGCAAAAATACTGCAACGCTGCGGTGAACGATTGCAATACAGTGTGTTTTTGCTAAGAGTGCGTCCGTCAAAGATGCTTCAGATTCAGAATCTGCTTGAGTGTGAAATTGATGGATCCTGTGATTCCGTGGTTGTTTGTTTCCTTGGGAAAGAGGAACAAGCGAAAGATGGGATGAACTTTCTTGGCAGGCGTGGGTATAACGATTTGGATATTCCTACTGTCATTTAGCGGTTTTATCACATATGGAAATGTTGTTTGAAAACTAAAGAGTGTGTCATGCTGATTCTTGATATGCGAGAGCTGAATCGGTGGAAATGTAAAGTGGTAGCGCTCGCACCATATAGGATAACGACTCATATGTGTTTGCATCGTAAATGATGGTTGTTCAAGTGTGTGACTATAGCGAGTTCTCGCAAACCTCTTGATTGAGCTAATCGATAGGCTGAGTTAGAATGAGGCC # Right flank : CGAGGCCACAGTTGATGAGGATGCTTCACATTCGGATTCAGTGGGCTCGTCATGCTGTGCTAGCACTGGATGCATCCCATAAATTGGAGTGCCTCATCCAGTTGCGCGGTTAAATCTCCGTCCAGCTCAGCAAAGAGACAAACCTCGATAAGGCTGCAGGGCGATTAACGCGGCGTACTCTTCGTGGAGTGCATCAATGCGGCAGACAGGCATTTTCATGCCTCGAGGTTGTTCATTTAACCAATTCAGCCAGAATTACACAAACGCAGAGCTCACCCATGCCTCGTCTTGAAACACTCTTCGTCACCATTAATACCTAGAAAAGGAAATGGTCGGGATATGGAACCCGATCCAGACAAATACCATTCCTCAACGAATAGGCTCATACGTGGCGTGGCGTAACCGCGTCCTGCGGGCTGCGCTACACTGGGGTGCGGCTCGTCATCTCGATGAGAGGACGAGCACGGTGATGGCGAGTATGAGCATAGTCGCATGCGTCA # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:-0.05, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCCTGAGCAGTAATGCTCAGGACTTCATTGAGGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.00,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //