Array 1 197676-198013 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQUG01000007.1 Schwartzia succinivorans DSM 10502, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 197676 37 100.0 39 ..................................... GGCAAGCTTCTTACACATCTCGAAGTCGATCTTGCACTC 197752 37 100.0 38 ..................................... GGTGCCATCGGTTAATACTCCATCTATGGCGTCCACAA 197827 37 100.0 38 ..................................... GAGTTACTATGAAAGTTCTAACGATGAAAGAACTGAAT 197902 37 97.3 38 ...............A..................... GAGTTACTATGAAAGTTCTAACGATGAAAGAACTGAAT 197977 37 97.3 0 ...............A..................... | ========== ====== ====== ====== ===================================== ======================================= ================== 5 37 98.9 38 GTTACATGTATGTCATTACCGCTTGCGGTATTGAAAC # Left flank : CACTCTCAACCTCATTTATTGGAACACTTTGAATCCTCTTTCCATCATTCTCGATTAAGAATCGTCCGCCGTTCTTACGCAGCTTTGTTCCCTCAGACACCAGATACAACACACACATAAAATCAGCCCCTTTTCAAATAAATCAAAAATCTTTCTGCATTCAGTATAAGTTTCTCCGCAACGCGGACAGATCCAATTTTTATGGGAAGTTAAATACTTAATCAGAAAAATACGTAATTTGTTTAGTTCCAATTGACACACAAAAAAGTGAATGATATACTCTCTCTTGGTGAAAACCTGTTTTACTGTCAATATAACGAGAGGTTTTAAAGCCATTCCGTGGACATGAAAAATCCCTGTGTGCCACGGAAAAACATGGATTTTGATTGTATTTTGAGATTGATGTCCATGTTCGGTTTTGGTGATTTTTGTGGTTTTAACCATAGGTTTTCCAAAACTGCTTTTCGGAGCCACTGGTGACGTGGGACTTCGGGCACAGG # Right flank : CTCCAGAACAAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACATGTATGTCATTACCGCTTGCGGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.10,-6.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-10.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : NA // Array 2 198534-199233 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQUG01000007.1 Schwartzia succinivorans DSM 10502, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 198534 37 100.0 40 ..................................... ACGGTGTCCAATGCTGAAGACGGGAGCGTCAGGACGTGTC 198611 37 97.3 37 ...............A..................... TGATAACGCTGTTAAGCGTATTTGCGATGAAATTCGT 198685 37 100.0 38 ..................................... CCGGGTCGATGAGTGCCTGCATATAAGCGCAGTAGTAA 198760 37 100.0 34 ..................................... AATTATTGATACTCATGATAAAATCACAATCCTT 198831 37 89.2 37 ........C....TGA..................... TTGCAGATTGCCTCTTGTTCACTTTCGGACATCCAGT 198905 37 91.9 35 .............TGA..................... CGGCGCCGGCTTTTAACTTTGCCCAAGCATTTCGT 198977 37 91.9 36 .............TGA..................... AACCAGCGGATATACGGATCAAGCCCATCCCATGCC 199050 37 100.0 38 ..................................... ACGAATCGGCACGGTTCTGCAGTCCTTTTGCTCCTGCA 199125 37 97.3 35 ...............A..................... TTCGGACATCCAGTCCTTAATTAAGCACTCGGCGA 199197 37 91.9 0 .............TGA..................... | ========== ====== ====== ====== ===================================== ======================================== ================== 10 37 95.9 37 GTTACATGTATGTCATTACCGCTTGCGGTATTGAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : GAACTTGAACATAATGATCAGCCTCCTAAAGATTTGTTACATGTATGTTGATACCGCT # Questionable array : NO Score: 5.75 # Score Detail : 1:0, 2:0, 3:3, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACATGTATGTCATTACCGCTTGCGGTATTGAAAC # Alternate repeat : GTTACATGTATGTTGATACCGCTTGCGGTATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.00,-5.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA // Array 1 83087-83487 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQUG01000006.1 Schwartzia succinivorans DSM 10502, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 83087 37 100.0 38 ..................................... CCCCATACTTTTCCTCATGGCTTCATACCCATATTTAT 83162 37 100.0 34 ..................................... AGAATCTTCTCAGAACACTCCTGCGGATTTTTGC 83233 37 97.3 36 ..........T.......................... TCCCGCACCGCACCTCCAACAAGGTACATATTACCA 83306 37 97.3 34 .............A....................... TTCAAGGAACGAATTCAGACAAGCAGACATATTT 83377 37 100.0 37 ..................................... TTTGCATCCAATACGAACTCTAATTCTTCAACATCCG 83451 36 91.9 0 .............................-..C...G | G [83485] ========== ====== ====== ====== ===================================== ====================================== ================== 6 37 97.8 36 ATTGCATGCACCCTAATACCGCTCGCGGTATTGAAAC # Left flank : GGGAGAACCCGAAAAATGCAAATTTTTACGGAGGTTTTCCAAATCCCTGTTTTCGGGGCAGTGTACGCAAGGCTTCGCGGACACAGTATTGCATGCACCCTAATACCGCTCGCGGTATTGAAACATAAATCGGTCGAGTTCTACGCCATTTTCATCGGCGATTGCATGCACCCTAATACCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACCGCTCGCGGTATTGAAACTACTGCAACTTTACCGCTGCTATGTGTGCTTTAAGTA # Right flank : GGGGCTTCGGAAAGCTGCACAAAAAAAGAGGTTCACCGACTCATTTGAGTCAGTGAACCTCTTTTTGTTATGCTCACATTGAAATTAAAATCTTTAAATGTTCGGAAACAAAACAGAAATATTTCAGTTATACACAAGTAAATATCGGAAGTTATCCACAAAAATGTGGATAAAATGAGTAATATGTGTATAGTTCTGTTGATAACTATGGGGGTATATGCAAAAATTTCCTAAAAAACATGCCTTCTCCTGAAGGAGAAGGCATGTTTCTAGTCTTTCTCAGTGGTGGAAAAGGCGGATTCCCGTGAAGGCCATGGCGATATTGTACTTATCGCAGGTCTCGATGACATTGTCATCACGTATAGAGCCGCCTGTCTGGGCGATATAGCTTACGCCGCTCTTATGTGCGCGCTCGATATTGTCACCGAAGGGGAAGAAGGCGTCGGAGCCAAGGCATATACCCTCGGCCTTTTTGAGCCATTCCTTCTTTTCCTCACGGG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:0, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCATGCACCCTAATACCGCTCGCGGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.70,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA //