Array 1 118384-117005 **** Predicted by CRISPRDetect 2.4 *** >NZ_QYRR01000005.1 Actinomyces sp. 2119 Scaffold5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================ ================== 118383 36 100.0 28 .................................... GTCGCGGCGGCGGGGCTAGTGGTGTGGG 118319 36 100.0 28 .................................... CCAGGACCTGCTCCCTGACTCCGGCGTC 118255 36 100.0 28 .................................... CGTCGAGGGCGTGGCTGCTGGGGTGCGG 118191 36 100.0 28 .................................... CCAGCGGGCATGCGGGGCCGGACCACGG 118127 36 100.0 28 .................................... CTGCGGGGCTGCGGTGGTGCGCGGCCGT 118063 36 100.0 28 .................................... GGCTGCCGCGCCTGGGGGACTCCCCGTT 117999 36 100.0 28 .................................... TGGTGTCGATAGTGCGGATGCACAGGAG 117935 36 100.0 28 .................................... CCACCGGGGAGCAGGTCGTCCTGGTGGA 117871 36 100.0 28 .................................... TTCCTTTCTGGTTTCGTGTCCTGGCTTG 117807 36 97.2 28 ..................................A. ACGGGCACGACAGGCACCCCGCCACAGC 117743 36 100.0 28 .................................... GTGGGGGCCGTAGGCATGAGTGCCTGCC 117679 36 100.0 28 .................................... ACACACGCCCAGTGGGAGTCCACGGCCA 117615 36 100.0 28 .................................... CCAGGGGGTCATCGGTGTCGGCGGGGGT 117551 36 100.0 28 .................................... CGTGGTCCACGTGGTCGGCCTCGGCTCC 117487 36 100.0 28 .................................... CCGTGACCTGCCCGGCGACAGGGGCCAG 117423 36 100.0 28 .................................... TATGACCACCACGCAGACGCATATAAGC 117359 36 97.2 28 .......................C............ ACCTGGTGGTCCACCACCTCGACGGGAG 117295 36 100.0 28 .................................... GGTCGCCTGCGAGGCCGTTGCCTGCTCA 117231 36 100.0 28 .................................... TGACGAGGAGGACGCTGGCTGACCTATG 117167 35 97.2 28 ...............-.................... CCGCCTCGGAGGTGTAGGAGCCGACCAC 117104 36 100.0 28 .................................... GAGTCGAACCCGCCCTGCGACCGTCCGG 117040 36 97.2 0 ...................................C | ========== ====== ====== ====== ==================================== ============================ ================== 22 36 99.5 28 GAAGCCTACCAGGGGGAAGGGTGACCGATTCCCAGT # Left flank : TTCAACGCAGGCGGCGACACCCTGCCCACAGTCCTCGAGCGCCTGGCACAGCACCTGGGGCAGTACGTGGAAGGAGACCGTAAGCGGCTGGACGTGCCGCAGTGGACAGGCCCTCACCGGGATCGTGACGATGGCAGATGACCCGATGTGGTGCGTTGTCATGTTCGACCTGCCGGTGGGCACCAAGAAGCAGCGCCGTGAGGCCACACGCTTCCGCAATCTTCTGCTTGACGAGGGCTACTGGCGGGCGCAGTACTCGGTGTACGTGCGCTACTCCCCAACCGTGGCAGGCGAGAACCGTAGGGTGAACGCCATCAAGGCCAACCTGCCCGCGGGCGGGGAGGTCCGTATCCTCTACGTCACCGACCGCGAGTGGGCACGGACGCTCTGCTTCCAGAACGAGGCACCCGTCAAGGTCGAGAAGGAGCCCCAGCAGCTCACGATCTTTTGACGTCGAACCTCGACCTTTCATTGGAATCTTCCCCCTAGCAGGCTATGAC # Right flank : CCTTCCGCCCTCAATACCCCTGCTGCACATCTTCAACCGGCCTCATTCCACGCAACGCCAGGAGAAGTGCCAGACTTGCGCGAAATCACGCGCAACGAGCAGGTGTGACGCAGCGGGCCACAACCAGACGTCGGCTCCACGATGTGCAAGGCACCCTTCAGCGCACATCGTGGACCCGACGAGACGGCCACTTCCTTACACCTATCGGCCGCACGCCTTTGGAATCTGGCGAAACAAAGCGGATCGCGGAGGCCGCTCTTCTCTGCTGTCCGAGGACCCCCGTCACGGGCACCTGTCTCGCAGGGAGGCCGCCTCACTCGTTCGCTATGTTCCTCCCCTCATGGTCCTCTCCTTTCCCCTCTGCCCCTATCCGCGGATCCGCAGCACCGGGTTCTCAAGCAGGCATGGTCCTCTCCTTTCCCCTCTGCCCCTATCCGCGCCGGTCAGCCCCTATCCGCGCCGGTCAGCGTAGCCCCGCGATACCACCCTCTCCAGATCAC # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAGCCTACCAGGGGGAAGGGTGACCGATTCCCAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.20,-2.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA // Array 1 303061-309008 **** Predicted by CRISPRDetect 2.4 *** >NZ_QYRR01000001.1 Actinomyces sp. 2119 Scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 303061 29 96.6 32 ............................G CTCCTCTCGTCGTTGCGGAGCAGGTGGGGACC 303122 29 100.0 32 ............................. ACGGTGGCTACTCACACGGCTGAGACGATTCA 303183 29 100.0 32 ............................. GAGTTGGACATGACGCCCAGGTAGTTGACCGC 303244 29 96.6 32 ............................G TACACCGTCGCACTGGCATAGTCCCCGGCGTG 303305 29 96.6 32 ............................G GGGGAGGACAAGGACGGCCGCGACTGAGCGGC 303366 29 100.0 32 ............................. CGAAGAACTCCCTCCTGCGGTAGTCCAGGTAC 303427 29 96.6 32 ............................G GACGAGGAGGTGCCGGGCACCGTTATCAAGAA 303488 29 100.0 32 ............................. ACGTTGGTGACGATATTGCGGACCGTGTTCAC 303549 29 100.0 32 ............................. CGTGCAGTGCGCAGACAGTTCCAGGGCCGGGG 303610 29 96.6 32 ............................T GTGGGTTTTTGGGTACAGCATGTTGTCTATGA 303671 29 96.6 32 ............................T CATGCCCTACGACGCAATCGCCGACCTGTACC 303732 29 96.6 32 ............................G TGCGTGCTGCCAGCCGGGATCGTAACCGACGC 303793 29 96.6 32 ............................G GGGGTCCGGGTGTGTGACAGGTGGCAGGACTT 303854 29 100.0 32 ............................. CTGGCCCGTCTCGGGTACCTGCACAAGGGTGA 303915 29 96.6 32 ............................G TTCACGCGCTGCCGGGAGGTCCTGGCCACCCA 303976 29 96.6 32 ............................G GACGACTACACCCGGGTTCTGGGCTGGTACGC 304037 29 100.0 32 ............................. GGCCGGAGTACTTGTAGATCTCCCGACCAGAC 304098 29 100.0 32 ............................. CTGGAGTCGGAACTGCATGAGGAGCGCAAGCA 304159 29 96.6 32 ............................G CAGGAACAGCAGAAAGCCGCTAGGAAGGCCCT 304220 29 96.6 32 ............................G GGGGTCCACCCGGTCATCGGTGGGGTGGAGCA 304281 29 100.0 32 ............................. TCCGTGGCCGAGTCGCTGGTGTACCTGGACCT 304342 29 96.6 32 ............................G GTCGAGGGGGCGGTGTATATCCACGAGGTTGA 304403 29 96.6 32 ............................G CTGTCAGCCGGTGTCGCGGCTGACGTGACACG 304464 29 96.6 32 ............................G CGGTCCTACTGCCGGGTAGCGGACATGCACTG 304525 29 100.0 32 ............................. ACCGGCCGGTTCTCCTCCCGGGGCACCCAGTT 304586 29 100.0 32 ............................. TACGGAGCACTCTCTAAAACTTTCCTAGATCC 304647 29 100.0 32 ............................. GTGTCCCACAGCCAATTACCGATCGTGATCGC 304708 29 100.0 32 ............................. CCCTCCAAGACCTTGCGGGCCTCTCGCATATC 304769 29 100.0 32 ............................. CCCACTTACCGACCTCGCGGGTGATCTCCTTC 304830 29 100.0 32 ............................. TGGATGGCCAACACGAACAAGACGCAGTTCCA 304891 29 96.6 32 ............................T CATCGTTTTCTTAGCTCGCGTATCCCACGCCA 304952 29 96.6 32 ............................G TCGCAGACCTGTGCGACTCGGTATATGACGCG 305013 29 100.0 32 ............................. TTTCGCAAGTCTACGAAAGTCTCTGGGTCCAG 305074 29 100.0 32 ............................. CAGGACTGTCCCCGCCTCAATCTGATCAGCGA 305135 29 96.6 32 ............................G GCGCTCCGCCGTGAGGTCACCACGGACCTGGT 305196 29 96.6 32 ............................G TGGACACACGTCCTGAGGTTCCCTGTAGCCCA 305257 29 96.6 32 ............................G GAGATCGCGGCCCTGGAGGCGTCCGCTGTGAG 305318 29 96.6 32 ............................T CCATGCCGTCCCGATCGTATACCCGACGTCTG 305379 29 96.6 32 ............................T TAGGTGACGGACCGTATGTCACGGTCTACGTG 305440 29 96.6 32 ............................G AGTCCACGCTAAAAGATCCCTCACGGCCGACT 305501 29 100.0 32 ............................. TTCCGGGGCGGCTTGTCGCCCCGGAGAATGGT 305562 29 96.6 32 ............................G TCGTGCACACGACACCGAGGGGAGTCGGGACA 305623 29 100.0 32 ............................. CCGGCGATGCGGTCGCCCGCACCGACAATGCC 305684 29 96.6 32 ............................G GTGTCGGTTTGGTAACTGGCGCGCCCCTGCCT 305745 29 96.6 32 ............................G ACAGAGACCTACCACCCCCTGACGCTCCGCTG 305806 29 96.6 32 ............................G TGGACACACGTCCTGAGGTTCCCGGTAGCCCA 305867 29 96.6 32 ............................G GCCCTGCGGAGGGCTACCAGGCAGTGGAAGCA 305928 29 96.6 32 ............................G CCCTTGAGGTGTCCCACACCGGGGACCATGCC 305989 29 96.6 32 ............................G GACGAGTACACCAAGCTCCTGGGCTGGTACGC 306050 29 100.0 32 ............................. TCTTCTGCCATGGCGGTGTAGGCGTGAGCCTG 306111 29 100.0 32 ............................. CAACCCCTCCCAGCACTGTGCCAGGCCCTCGT 306172 29 100.0 32 ............................. AACCCCCTCCTGTGCGACGGCGCACCCACCCT 306233 29 100.0 32 ............................. CGGGACCCCTGACACTACCCCCGTAAATGAGC 306294 29 100.0 32 ............................. TCGCGAGGCTGCTGGAGGACGGCTGGGTCATC 306355 29 96.6 32 ............................G TGGGCCGCCCCTGTGGGCCTGCCCACGTCGAG 306416 29 96.6 32 ............................G TACTCGCCATACTTCTGGGCATACCAACGGCC 306477 29 100.0 32 ............................. TCGGGCAGATACACGCTACATCACCACCGCTC 306538 29 96.6 32 ............................A TCTCCCATCGCGCAGGAGGCTGACGACACCCA 306599 29 100.0 32 ............................. TGGGCCGCCATCAGCCGCACGTGGGACACGGT 306660 29 100.0 32 ............................. GGGAGTACCAGCAGGCCTAGGCCCATCGTGAA 306721 29 100.0 32 ............................. GGCAGTAGTAGCCATGACTCTCCTTGAGTTGT 306782 29 100.0 32 ............................. AGTAGACGAGACGGACTCTCCGCCCGTCAGAC 306843 29 96.6 32 ............................G CTCTTCGGTGATTCTGTCCCACGTCTCGTTGT 306904 29 100.0 32 ............................. CTCGATGGACTTTTTCCTGGCTCTCGTGATGC 306965 29 100.0 32 ............................. TCCTCATCGTCGCCCTCCCAGTCATCGGGGAG 307026 29 100.0 32 ............................. GGGTCGATGTGGGCGTGGTAGAACCCACCGTT 307087 29 96.6 32 ............................G TCCGCCGTGATCCCGCAGCTAGTGGGCAGCCG 307148 29 100.0 32 ............................. GACGGACAGGTCACCGGCCTGTGCCTGGATGT 307209 29 100.0 32 ............................. GAGGACCCGGTTCAGCTGCTGGCTGAGGCCAG 307270 29 96.6 32 ............................G ATGGTGGTGGGGAGGACCTCGATGGCGGTCAG 307331 29 96.6 32 ............................G CTGGTACGCAGCCCGTAGGCGGTCACCGGTGG 307392 29 100.0 32 ............................. CGAGGAAGCCCATGTGGTGATCGCGTCCCACA 307453 29 93.1 32 C...........................G GTCACCCAGGCCCACCGGTCAGCCACATCAGG 307514 29 96.6 32 ............................G CACCGCCCTCCTGGTAGCAGCACCAGCCGGTC 307575 29 100.0 32 ............................. TCCGCAGCGGCCACATCACCCAACCCACCGGG 307636 29 96.6 32 ............................G GTCGGCGCATCGCTGCCGGAGCTGAAGATGTA 307697 29 96.6 32 ............................G TTGTACACGTCCCGGCCGGGCGTGTACCCGGG 307758 29 96.6 32 ............................G AACCAGGGGAGGTGTTCCCCTCGATGGTCTGG 307819 29 96.6 32 ............................G AACCAGGGGAGGTGTTCCCCTCGATGGTCTGG 307880 29 96.6 32 ............................T CAGTCAACTCAATCTCACACTGGGTGGCGCCC 307941 29 100.0 32 ............................. TCCCACGGACCGCGCTTGCAGGAGATCAGCGT 308002 29 100.0 32 ............................. CGGCGTCTCACGCACCCGCATACCGAACGTCG 308063 29 100.0 32 ............................. GGCAGTAGTAGCCATGACTCTCCTTGAGTTGT 308124 29 96.6 32 ............................A TGACCATCAGGATTGTCAAGCCACTACCGGTC 308185 29 96.6 32 ............................T ACCCCGCACGCGCCACACCTCGCCCTGTGCCC 308246 29 100.0 32 ............................. GCCGCGCCTCATCGCGAGTCATGATCGGGCCA 308307 29 96.6 32 ............................G GCCGTGTTCCCGAAGCAGAAGTGGATCAAACT 308368 29 100.0 32 ............................. CGGACCGTGTGCCGGGTTGTCCCGGTGATGGG 308429 29 100.0 32 ............................. AGATCAGACGCCCCACCCTCAGGCTCCGGAGG 308490 29 96.6 32 ............................G AGGCTGCGTGCGCGCACCCGTACCCGAGTCCA 308551 29 96.6 32 ............................G CCAACACGCGCGAGTGCACCTTCGTTGATCAT 308612 29 100.0 32 ............................. CTGGTGCTGCGAATGTACGTCTGCCAGACGTC 308673 29 96.6 32 ............................T ACTTGGCCTAGAGTAAGGAGCAGAGATGGCCA 308734 29 96.6 32 ............................G AGGTCCAGCACCTGTTGGGAGGGGACGTTCAG 308795 29 100.0 32 ............................. TGCCGCACGGACTGGACAGCTTCTGGCTGACC 308856 29 96.6 32 ............................T CTCCGTCCCACCGGCCGTGCGTCCTCATCTCC 308917 29 96.6 32 ............................G GTCGGCCGTGCTTGGGTCGTGCCCGCCAACGC 308978 29 89.7 0 ...C.....................A..A | AA [308999] ========== ====== ====== ====== ============================= ================================ ================== 98 29 98.0 32 GTGTTCCCCGCATACGCGGGGATGAGCCC # Left flank : CCGGACATAGGTGACCTGGTGCTGTGGTCCGAGCTGGGCACGGTAAGCAGTGGCGTCAACTACGCGGAGGCCGAGCAGGAATGATGACCTTAGTCCTTAGTGCCTGCCCGGCAGGACTTCGAGGCGACTTGACCAAGTGGCTGCTGGAGATCAGTCCGGGTGTGTTCGTCGGGCAGGTGAGTGCTCGCGTGCGTGACCTGCTGTGGGAAAGGACTGTGGCGCTGTGCAAGGACGGTCGGGCTCTGCTGATCTTCAGCGCGGCCACGGAACAGGGGTTTGCCTACCGGACCCACAACCACGAGTGGGAACCGGTGGACTGCGATGGGGTGCTGTTGCTTCGCAGGCCGCTCCAGCCGAAGAGGCAGGTAAGACGCACGGGCTGGAGTACTGCCCGAGCCCAGCAGCGCTCTCGGCGCCCGCGGTGGGCAGCACCACGTCCCGACGCAACCAAGTCGTACCAGAACGAGCCGGATCCAGGGTAAACTCGCAGGTCAGGAAGT # Right flank : AAGCGCCCATATGGTGGGTGGGAACAACGGCCTCCGAGCATCTACGCGCACCCGTCGGCTACGAGCATCCACCCACTACCAGGCGATTGGCAGACTGCGCGGCCACATAGGCCATGCGCTGCATAACTCTCCGAAGCAGTACCCTTAACAGCAGCTCACGGGTCACGACACAGAACGCTGTAAAAATGCCTCGCTCAGATCCGGGTGCCAGAAGGAACAATCCCCGGCGACCCCTCCTCCCTCACCACGGCGTCCCCGGTCGCTACCACGTCAGCACCGAACGTCCAGTCGCCCTCCACGGTCAGCGAACTCGCCCCGCGCACAGAGGGGACACCCTCAGGGAAGCGTGCCTCGAAGTCCCGGATGGTCTTGTAGTAACGAGGGTCCAGCACCACCGTGCAGGCCTCCTGCGGCACCTGCACCAGCAGGCCGTCCTCGTCAACCTCGTAGACGTCAGAGCGCAGCAGGAACAGGTCGTTGGTAGTCTTGACTGGGAGGAA # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.61, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCATACGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCATACGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 50142-50840 **** Predicted by CRISPRDetect 2.4 *** >NZ_QYRR01000007.1 Actinomyces sp. 2119 Scaffold7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 50142 28 100.0 33 ............................ CTCGGACCGGGAGGAACGCACCATGGACACGAC 50203 28 100.0 33 ............................ GCCGCTGTGGTCTGTCGCGGCCCGTAGGCGTTC 50264 28 100.0 33 ............................ CACACGCCTACCATCCTCCTCTGGATCTAGAAA 50325 28 100.0 33 ............................ TCCAGGCGGTGCCGATAGTGTGCCCGACGTCTG 50386 28 100.0 33 ............................ GATGGCTAACCGGCGGCGGTTTTGCTGTCTCGG 50447 28 100.0 33 ............................ TTGGCACAACACCGGAGGAAGGGATCCGCCTAC 50508 28 100.0 33 ............................ CATCGCGCAGTAGGGCACACCGGTGGTACCAAA 50569 28 100.0 33 ............................ GCTGGGGTAGGGGCTGTCCGGGTCGGCGGCCTG 50630 28 100.0 33 ............................ CCGGATCCACTCCAGGACGGTAGCCGGGGACAG 50691 28 100.0 33 ............................ GCTGGGGTAGGGGCTGTCCGGGTCGGCGGCCTG 50752 28 100.0 33 ............................ CAAGCGCAGGATCGCGAACCGGGCCACGGCCCG 50813 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 12 28 100.0 33 GCCAGCCCCGCGTGCGCGGGGGTAGAGG # Left flank : TCGGGTGGGTCTCCGGTAGTGGGCAGCGGGAGGTCCCGGTACTCCGAGGAGTCGCGGTCTGGGCGACGTCGGTCCCGCGCCCGCTCCAGCTCGCTGTCCGCAGCGGTGTCGTGGAGGCGCGACCCACCGAGCCGCGCGCGCTGTCCTCTCTCCCTCGTGTCGTGCGCGCAGCGACCCAGCCGTCCCACGAGTGGACGTCAGTGGTTCCGGTGACGGCCACCCGTGACGCCGTGGAGCGCAGCCTGAGTGATCTCGCTGCTAGTCTCAGGACCCGGGTCTGCTGGGCTGGCCTGCATTCTGAGGCCAGGCCCGAGGTAGGAAGCGACGTGCACGAGCCCGACGTGGCGCGGCACGTGACGGTACGTTTTCGGGACACCGTTCCTGGACCGGTAGTGCTCAACCACACCTGGATGGTGCCCGCAGGCGCGACAGGGTTGGCGGTGAATGCAAAACGGCCTCACCGTCGCACCGGATCCGCGTCATAACAGTGGTTCGCAAGT # Right flank : GTATACTGGTGCCATCATGATCAGCCCGTTGCCGCCAGGCGCGGGCTGATTTTCCTTGTCCCAGGGAGGACCATGGCGGAGTACGCGAAGCCGTGGCTGTCCGTCGACGAGCAGATCGACCGGCGTCTGCGCATGCTCGTCATGGACGGCGTCGAGCGCATTGAGGTCGCCATCCGCATGCAGATCGGCTACGTGCTCGGTAGGAGGTCGCCCTTCGCCTACGAGGACCCGGACTGTTTCACCAAGGCCTTCACCGCCGAGGGCACCGACGTCCGGGACCCCGCACCGAGCAGGCACGTGCAGTGGCTCCAGCGGGTCAACGAGAGGAAGAGCAGTTCCGACGAGCAGTTCGTCAAGCACTTCCAGCAGAAGTACGACAACCGGATGCCGGTCTGGGCGCTGACCGAGATCCTCGAGCTGGGTCACCTGTCCCTCCTCTACCGGGGCATGCGCCAGCAGGACGCTGAGGAGATCGCCCTGGCGCTCGGAGTTCCCACGAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCAGCCCCGCGTGCGCGGGGGTAGAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [43.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0 Confidence: HIGH] # Array family : NA //