Array 1 81864-82636 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AUZP01000011.1 Mycobacterium avium subsp. hominissuis 101 contig011, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	============================	====================================	==================
     81864	    28	  92.9	    34	C...........T...............	GGTCGGTCACTGCGGTGGTGTCCTGTGCATGCTC  	
     81926	    28	  96.4	    33	C...........................	TCCCAGGCGGACGCAGTGCCAGGGATGGCGAGT   	
     81987	    28	 100.0	    34	............................	CGAGGCCGTCGCGGAGGCCTTGACCGACCCCGAT  	
     82049	    28	 100.0	    36	............................	GCGCACCTCAGCTGCTGTGCTGCGTGAGCGCGTCAT	
     82113	    28	 100.0	    34	............................	CCTGCACCAGTCGATCCACTGCGACGTGCGCAGC  	
     82175	    28	 100.0	    34	............................	CATCCCAGGTCAGGAAGTCTGCTCCCCGCGTAAG  	
     82237	    28	 100.0	    34	............................	GGGCCTGTTGCTCATCGGCCCGCCGCGCTCGGGC  	
     82299	    28	 100.0	    33	............................	GCCGATACCGGGCTTGGCATCCGTGCCGTACTG   	
     82360	    28	  92.9	    33	C........................C..	CGTGCCCGGTGGAGGAACCACCTCTCCCCCCAC   	
     82421	    28	 100.0	    33	............................	GGCCGCAGAGGAGGCCGTCACCGCGGCGAAGAC   	
     82482	    28	  96.4	    35	C...........................	CCTCCGATCCAGGTACCGCGTCCGGAAGATGTGGC 	
     82545	    28	  89.3	    36	C...........T............C..	CCCCCGTCTGCAGCGCAACGGTTCCTACTGCACCTC	
     82609	    28	  96.4	     0	C...........................	|                                   	
==========	======	======	======	============================	====================================	==================
        13	    28	  97.3	    34	ATGCTCCCCGCGCAAGCGGGGATGAACC	                                    	       

# Left flank :   TGGTCGTGGCGCTGGACTGCACCGCGACCGGTTGCCCGGCCACGCCCGTGGAGCATGCCGACAACACCACCGCGGCGGCGATGCCGGCGGCGGCTGCTCCAAGTCGCGTCTTCGTGCTCATGCGTTCGATTTTGGCAGATGAGGCCGAACAACCCGCCGATGCGCGTGTCACGTCCCCCATCCGGATGCCTTGAGCGCGCGCGGGATTCATCGGTCGGCCAGCTCTACAAGGCGCCGTTCTACGGCGCGGAGGTCGGCCACCACGGCGGTCAACTTCTCCGCGTCGGCGACGGTGCTGGGGGCTTGCTCCAGGAGCTTGATCGCCTCGCGCAGCCGGGTGCGGGCACCGCTCACGTCGTCGTGGATCGAGCGGTCCAGGTTGGTGATCAGCGGTCGGTAGCTGGTGCTCATGCCCGCACGGTGGCATGTCGCCGCGGTGGGGTGATGTGCGCGGCGCGGGTACGGAGGCGCACTGCGCTGTATCGTAGGAGGCAGTGAGT
# Right flank :  CGCGCACCGAAGTCGTGCCGCATCCAACGGGCCGGCACCGAGGTGCAGTAGGAACCGTTGCCCTCCAGACGGTTCCGGAAAAGTTGGAACAACATTTCTGATTCTGTCCCACCGTCCCGCTGACCAGCAGGCTCTCGATTATCGAGACAGATTCGGCGTCTGATCAGGCACGATGCGGCGCCTTCGTTGCGGACCACTGTCCAATGTGACTGCTACAACTGGAGCCAGCTTCCCCAAGCTGCCCAGCCAACCGGAGGAGAGACGATGACCACCACCACCACCACCCGTATCCGCATCGGAACGCCTGCCGTCGCCGAGCGACTCGGCGTGTCGGACGAGACCATCCGTCAGGAGATCAAGCGCGGCAACCTGCCCGCGATCCGCGTCGGCCGCACCTACCGCGTGCTTGAGAGCGACGTCGACGAGTACATCGCCGCCGCGGAGGCGGAGGCGTACAGCGCGCGAAAGCGCAAGGTGGGCGTGGAGGTCACTTCAGGCGA

# Questionable array : NO	 Score: 6.08
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.96,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ATGCTCCCCGCGCAAGCGGGGATGAACC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [5,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGCTCCCCGCGCAAGCGGGGATGATCC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-10.50,-8.90] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [1-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [33.3-31.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.65,0   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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