Array 1 278786-281988 **** Predicted by CRISPRDetect 2.4 *** >NZ_FPAP01000003.1 Chryseobacterium formosense strain DSM 17452, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 278786 46 89.4 30 A..-.A.GA...................................... TCTCCATCTGGTATATAATCATACTGAACA 278862 47 100.0 30 ............................................... GAGTGATAGTATTCTAATCCTAACGGTATA 278939 47 100.0 30 ............................................... AGAAAAGGAGGTTTGAAAAACTTCATTCAA 279016 47 100.0 30 ............................................... TGTGTAGCTAAATACACACAGTTTGCTAGA 279093 47 100.0 30 ............................................... AAAGATGCTAATATTAATCCTCACTTAGCG 279170 47 100.0 30 ............................................... CGTAAACAAGAATGATATTTCCGATAATCA 279247 47 100.0 30 ............................................... GACGATAAATATTATATCTCTACAGACCCT 279324 47 100.0 30 ............................................... CAACGAAAGAAGATGAAGCGCCATTTAGCA 279401 47 100.0 30 ............................................... GCAATGACATTTCAACATAATCAATCATCA 279478 47 100.0 30 ............................................... TTTTACTTCTTTTGTCGCCATAATTTTTTA 279555 47 100.0 30 ............................................... TAATGACTGCTCCAGGAAACACAAGCTTTA 279632 47 100.0 30 ............................................... AAAATAATAATTTACTACACAAGCGATACA 279709 47 100.0 30 ............................................... GACCTTGAATGTTGCTCCACTGCAATGTTA 279786 47 100.0 30 ............................................... TTAATTAAAAATGAGCATGGTGTTTACATG 279863 47 100.0 30 ............................................... TTATTCTACTACCTATTGACACGTCACCAA 279940 47 100.0 30 ............................................... AGTCATGCGGAGATCTTCTTCATTACCACA 280017 47 100.0 30 ............................................... TTCTGCAAGTTTATTAATCACTGCTCTTGA 280094 47 100.0 30 ............................................... TCTTTTATTCTGGATAATGAATGTTTGATA 280171 47 100.0 30 ............................................... AGAGCTTTGTATTACAAACTTGAAAATTGG 280248 47 100.0 30 ............................................... AAATACCAGATAAAAAACAACCTAAAAAAG 280325 47 100.0 30 ............................................... ATTCCAATTTTGAAAGGTTTTGAAATTCAA 280402 47 100.0 30 ............................................... GACCCACTAAATGCCTGCATAAGATTTATA 280479 47 100.0 30 ............................................... TGAGTTCCTGCCAAGATTTTGCGACAGTGA 280556 47 100.0 30 ............................................... TATAACCATATTTCTATATATGCAAATAAA 280633 47 100.0 30 ............................................... ACCCGTTGTCTATATGTCTGCTAGGATCAA 280710 47 100.0 30 ............................................... CACCAGTGTTAATTCAACTCCTTGTTGACA 280787 47 100.0 30 ............................................... CATAGCTAACGGAACAGATGACTCTATATT 280864 47 100.0 30 ............................................... TATAAGTAAATTTGAAAGTTTAAGTAAACC 280941 47 100.0 30 ............................................... TCAGCGGATAATATACCTTGATTTTGGATT 281018 47 100.0 30 ............................................... TATAAGTAAATTTGAAAGTTTAAGTAAACC 281095 47 100.0 30 ............................................... ATTTTTAATCTAAATTCTTTATGTTTTTCA 281172 47 100.0 30 ............................................... AATATTTTTGTGCTTAAACTTTTCATGCTA 281249 47 100.0 30 ............................................... ATTCAATCTCCATGGTACGCTATGAATACT 281326 47 100.0 30 ............................................... AATAGTATTGAATTACCATCAGCATACATA 281403 47 100.0 30 ............................................... ACCAAGCAAGACGAGTTATCGAAAAAATTA 281480 47 100.0 30 ............................................... AAATTTGCATATATAAATTTTCTTCATCCA 281557 47 100.0 30 ............................................... GAAACAGATATAGAAGACATTAACGAGATA 281634 47 100.0 30 ............................................... TTGCATATAACTTGCCAATTCTTTTCTCTA 281711 47 100.0 30 ............................................... TTTATATAATAAAAGTATTTTGGATGCACA 281788 47 100.0 30 ............................................... AATTCATTAGATATTTCGTCAAGCCATCCA 281865 47 100.0 30 ............................................... TCTTGGGTTACACTCTATGAATTCTGGCGA 281942 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 42 47 99.7 30 GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATTACACAAC # Left flank : AAAGCAAAGCAAACATTTATCTGGATGAAATGTTAGTGGATGCTAGTTCTCTCAACGGAATAGCTGTTGCCAATATTGCTATGGTTAAAATCATAAAAGATGGTGGTCTTGGGATGAGCGGCGGCGGAAATGGCGGTGTGCTAATTTACACTAAGCGTGGAGATACCCAGAGTCCCATTGAAAATAAACTTTCTACGATGGTCGATTTAAATTTTTTCGTGATGGAAGGTTATAATGAATCTGAGAAATATCCTGATTCCGATTATGGTAATTCTGAGCTCTCAAAAATCAGCACCGATTATCGCCCTGTATTGTTTTGGAATCCTACTCTTGAAATTGATGAATCCGCTCCTGCCATAATTAACTTTTACAATAATGATTCAGCGAAAAAATACCGATTTATGATTATGGGATTCGATGCTGAAAAATATATACCGGTTTATTATGATAAATTGATGCCTTGATGATCAACGCATGAAATATTGCCAATCATTTTGTGA # Right flank : CCTCAAAATTTAATCCGTTGATTATCAACGGATTTTTTATTTATTTAGGATTCAAAATTTAGAATAATTCAAGTTGTTGGAAGGTCGGTGGTGGTTCTTCTTTATTCCTGGCAAAGAAAATTTCAATATCCCCAAACTGCTTATCCGTAATGCACATAATGGCAACTTTACCCGCTTTAGGAAGCATAAACTTGACTCTTTTAATATGAACCTCAGCATTTTCACGGCTTGGACAATGCCGAACATACATTGAAAACTGAAATAAAGTAAAACCATCATCCAACAAAGATTTACGAAAGCGGTTGGCATCTTTCATATTGGCTTTAGTTTCTGTCGGCAAATCATATAATACTAAAACCCACATAATTCGGTACGCATTAAACCTTTCGGCGTTCATATCAGCTCTGGATAAGAAATCAGTCGTTTTTCTCCTGTGTAACATTTATAAAGCGAAGTAGCAGTTGTTTTTACGGCTACCAACAATGGTCTTGTTTTACTTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATTACACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATTACACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.80,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //