Array 1 2701640-2699625 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017713.1 Loigolactobacillus coryniformis subsp. coryniformis KCTC 3167 = DSM 20001 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 2701639 36 100.0 30 .................................... GTCGGTTAAAATTCCAGTGGCTGCCAGCAA 2701573 36 100.0 30 .................................... CGAAGCGCTGGAAATTGCTCCTATCGGTCA 2701507 36 100.0 30 .................................... TGATTCGTCAGAAATTCTTAAATCGTATTT 2701441 36 100.0 30 .................................... TTTTTGAAATGCTGTTGATCGATGTTTAAT 2701375 36 100.0 30 .................................... GATCATTAAGCCGATGCTCATGATCTTTGT 2701309 36 100.0 30 .................................... ACCGAACGTGATCGTAACCGCCACCCTCTA 2701243 36 100.0 30 .................................... AAAAGAAATGACAATTAAGTATGAGTGCCA 2701177 36 100.0 30 .................................... TTACGTTAGGGTTTTTAGCTTTGAACTGTT 2701111 36 100.0 30 .................................... TAAAAATCAATTCTGGTTTTGGAAAGCCAT 2701045 36 100.0 30 .................................... CATAATTTTCTAAAATTTTCTGGCAATCGT 2700979 36 100.0 30 .................................... TTATTTCAAAATGGGAATCTATAACTTGGC 2700913 36 100.0 30 .................................... ACCGTCACTAAGCCGCCTGAAACAGTAGCT 2700847 36 100.0 30 .................................... AATGGATTGATCCCATCGGACTTAGCAACT 2700781 36 100.0 30 .................................... GTAAACGGCCGCTTGAAGGCGCCCTGACTG 2700715 36 100.0 30 .................................... TACGTATGAAAGCACGATTACATTACCAGT 2700649 36 100.0 30 .................................... TCCGGTAGATCCGTCAGTCCTGGAGACGCT 2700583 36 100.0 30 .................................... ATACGCGGTCACAAAAACACCCCAAGGGTA 2700517 36 100.0 30 .................................... TTGTCGTACCCACATAAGTTTCACCTTCCT 2700451 36 100.0 30 .................................... GGCAGATTAATAATAGCGGTATCGTCATCA 2700385 36 100.0 30 .................................... GGGAGTATCATAACCACCCATATCAGTCGT 2700319 36 100.0 30 .................................... GGCTGCTTAAGCGTGCTTAAGGCTTGTCTA 2700253 36 100.0 30 .................................... CCGGATTGCTGTTGCAATAAATAATTGTCC 2700187 36 100.0 30 .................................... GGCAAATTATGGCGTTAGTCAACCTGGCGT 2700121 36 100.0 30 .................................... TTTCCTTTACCTTACAAGACTTATTATATA 2700055 36 100.0 30 .................................... CCTTTCCTTATCTTATGAGCCTAGTATATA 2699989 36 100.0 30 .................................... CACTTTGCGTGTCGTAATCGTAAAAGTCCT 2699923 36 100.0 30 .................................... CGGTTATATTCGGCCAAGAATTGAGCGTAC 2699857 36 100.0 30 .................................... TCAATAAGCGATTAGTAGCTGTTGATTTTT 2699791 36 100.0 30 .................................... AGAATATCATGGCTATCAACGACTGTTTCC 2699725 36 100.0 30 .................................... AGGCACCCTTCGAAAAATCGTCGGCGACCT 2699659 35 80.6 0 .............C..........C-....GT..AA | ========== ====== ====== ====== ==================================== ============================== ================== 31 36 99.4 30 GTTTTAGAAGAGTGTTAAATCAATGAGTTTAGAACC # Left flank : GCACTGACTTAAATAAATTGTTTCTGCCACAATTGTACAAGCAAATTAAATTAAATTTAACTGCTGAACAAAATCGAATTATTACGGATCAAAGCCGTACGCTAAAAAATGTAGTACTTGAAGCGACTTACTCGCTGGATCTACCGCTAAATATCGGCGACCAAATTGCAACTGAAAAAGTTTTAAAATTTTGCGATCTACACTTTGATACTTCTTTATCAACTAACTGTTATGGTATAATAGAGACAATTCTAAAAACAGCTAAAGAATTAAATGAACAGCGTATTTTAGGTTTTATGAACATTTCTGATTATCTTACATTACAAGAGTTACAAGATTTATTTGAGTTGATCAGAACATTGGATTTAACCGTTCTTATTATTAAATTCTCAGAAAATCAGAGGTCTGTAGAATTTAATAATTGCCGGTACTACTATATTGATCAGGATTACGTCGATTGGCGTTATGAGTGATTCTGAGAAGATAATGTGGAAATAACG # Right flank : TAGCGCCTAATTGATGGCGCTATTTTTTACAATCAAATTTAGTGCATTTCCGCGCAACATCACCGATAATACAGGTAAATCTGCGGACAAGGTGGTGGCGTCATGACACCGGTGCAGGAAGCACAACTTAATGACATTTACAATTTGATCCTCAACCCAGCAACTCGTGACTGGGAGCGAGCGCAACTAGTTAAGCTGAAAAAAGCCGTTGCTGCAGGTGCTACTTTTAATACGGAGTTGGCACGGTTGGAAGCTAGCTTACGACCTTTGGCGGTACGCGATAATCTGACTCCCGATATGACTGATTTTTATCACAAAATTACCGGTGAGCCTGAATTGGCCGCCAAATTTGATCTTTCCCGCCACTATGCGGCCGACCAGCCGTATGAAGCGCGGGCAATTTTCGCCGGTGGTTGTTTTTGGTGTATGGTTGAGCCGTTTGATGCGCGACCAGGGATCATCGCGGTGATTTCGGGCTATACTGGCGGTCACACCGAAAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGAGTGTTAAATCAATGAGTTTAGAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: R [matched GTTTTAGAAGAGTGTTAAATCAATGAGTTTAGAACC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //