Array 1 118219-116848 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAETYH010000001.1 Escherichia coli strain ATC-11-10 contig00001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 118218 29 100.0 32 ............................. ATTAACGGTCGCATCATCATATTGAAAAAATC 118157 29 100.0 32 ............................. TTATATAATGGCGCATTATTTTGGCGTATCTG 118096 29 100.0 32 ............................. CACATTTCGCAAGACGCATACGGAATCGCGGC 118035 29 100.0 32 ............................. GTGTACCTGCGCAAAAAATAAGCGGCGGCAAA 117974 29 100.0 32 ............................. GCGAAAGCCCAGCGGAGATTCATCACGTCCGC 117913 29 100.0 32 ............................. CGTTTATTGCGGCTATTGAAGAAGAGCAGGAA 117852 29 100.0 32 ............................. GCTATCGGGTGTGGATACCGCTTTCGAGGCGT 117791 29 100.0 32 ............................. CCGAAAATACACCTAAATCAGCAGTTATCGCT 117730 29 100.0 32 ............................. GCGAAAGCCCAGCGGAGATTCATCACGTCCGC 117669 29 100.0 32 ............................. CGTTTATTGCGGCTATTGAAGAAGAGCAGGAA 117608 29 100.0 32 ............................. AAGTATTTCCGTGCACCGTGGGAGGCGTTTTG 117547 29 100.0 32 ............................. CGCGGGATACGCCGGTTATATCACTGGTAGTG 117486 29 100.0 32 ............................. TAGTTGTGCTGATTTTTGATGGATGGTTATAA 117425 29 100.0 32 ............................. GAACTTGCTTACCTTTGCTGTGCTCGTCAGAA 117364 29 100.0 32 ............................. GGCGTTGGTGGCTGGGGCCGCCCGGTTGTTGA 117303 29 100.0 32 ............................. AAATGGCATTCGCTGTTGGAATTATGGGGTAT 117242 29 100.0 32 ............................. AGCGATTTCAACGCGGCGACGGTGGACTTAAT 117181 29 100.0 32 ............................. CCAGTAGGCGATTTGCGGGGCGTTCATGTTTT 117120 29 100.0 32 ............................. AGTCAAAATTAGCAAAACTTGATTCAAATAAC 117059 29 100.0 32 ............................. TCCGGCGAGCTGGTCACCTGGCTGAATAAATT 116998 29 100.0 32 ............................. GAAACTGAAATCGCGGTTGATAACGCTGATAT 116937 29 100.0 32 ............................. GGTAAAAACACGGTCTGAACCGACATTCATGT 116876 29 96.6 0 ............T................ | ========== ====== ====== ====== ============================= ================================ ================== 23 29 99.9 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTTGCCGCAGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCGCCTGCCATCCCTGAACCTGAAACGCTGGGTGATAGCGGTCACCGGGGGCACGGCGGATGAGTATGGTCGTCGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTTGAAGTGCGTGCCGGTGTTTATGTCGGAGATACATCCAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCTCAACTGGCAGGTTGCGGAAATGTGGTAATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAATAGACGTATTCCGGTGGATTTGGATGGGTTGCGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTATCCGTTCTTTAAAAATAAGGAAATGTTTTAATTTAGTTGGTAGATTGTTGATGCGGAATAAATTTGTTTAAAAACAGTTATGTATGCTTAGT # Right flank : GACGCACTGGATGCGATGATGGATATCACTTGGAGTTCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCATACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAGCGGTAGCATTATCCGCATAACATCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTGCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATACCGGCTTTGTCGAATATTTCTGCGTCATTACAACACCCGGTGCCTTTCGGATAGTTTTTATTCAAACCTGGATTTGTGGTGGCGGCAATTCCATGGCTGCGGGCAATTGCCAGCGCCCGGTCGCGCGTTAATTTCCTTACTGCTTCAGGTGTTTTTACGCCACTGTTGAAATACAGCTTATCGCCAACAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //