Array 1 2131005-2132840 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP036291.1 Pirellulimonas nuda strain Pla175 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 2131005 33 100.0 33 ................................. ATGGGGGCTCGCATGACGCCACGCATCGGCAAG 2131071 33 100.0 33 ................................. CGCGAGACTCGAACGGCGGCGGCCAAATGCGGC 2131137 33 100.0 35 ................................. ACCGCGAGCCGCACCATCACGGGCGCGGAAACGCT 2131205 33 100.0 33 ................................. TCTGGCTCCAGGTGCCAGCCCAGCAGCGCGGTC 2131271 33 100.0 34 ................................. GAGGGGCTGGTCGGCCGCAACTCCGTCGACGTGC 2131338 33 100.0 34 ................................. AACAAGTCTACGAAGCGGGGGCTGCTGTCGTTCG 2131405 33 100.0 34 ................................. ATGGGGTTCGCCTAGGAAACTGGTCTGCACTTCC 2131472 33 100.0 34 ................................. ACTTACCGAACCCGAGGCGAGGAACCGACGATGA 2131539 33 100.0 34 ................................. GGATCTCCGGCGCCCAGCAGTCGAGCAGCCGGAC 2131606 33 100.0 34 ................................. CCGATTCCGCCAGCTCCAGCCCCCCGCCGCCCGA 2131673 33 100.0 36 ................................. TGTGTTTATACACCCACGCCTACCCCGATTTTGGTG 2131742 33 100.0 36 ................................. GGCCGCACCATCTGCCCGATGACGCAGGCCCGCGCC 2131811 33 100.0 35 ................................. ACAGCCTACTCCGGCGGCGAGGGCAAGAAGCCCGA 2131879 33 100.0 33 ................................. CGATAACCGACTCTATCCCCGACGCCACCGAGC 2131945 33 100.0 34 ................................. CCTGCTACGGTTGCGAGCACAACCCGACCGAAGC 2132012 33 100.0 33 ................................. GTCGGTTAGGGTGGGTGGGGTCACGATGCGAGT 2132078 33 100.0 33 ................................. CGCTACAGCGCGGCCCCGCACGACTACCCCCAG 2132144 33 100.0 34 ................................. TCCACCACCGTCGCGGCCGCCGCCGCCAAGGCGC 2132211 33 100.0 33 ................................. CGGCTGAGCATGACCGACTCCGCCGGCAACGTG 2132277 33 100.0 33 ................................. TTCTCGCGGATACGCTCCGCACGCTCGCCCACC 2132343 33 100.0 33 ................................. GCTCGAGGACCCCGACGGGGTGCTGGCGGAGTG 2132409 33 100.0 33 ................................. GACAAGTCCGCCGCGCAGCACGTCCACGCCCAC 2132475 33 100.0 34 ................................. ATCACGCTGATGAAGAAGAGCCAGGACGCCGGCA 2132542 33 100.0 33 ................................. CTGTTTGAGCCGAACGTCACCGGGCTGACGATT 2132608 33 100.0 33 ................................. TAGGCGCCGCTGCGTGTGACCCGTCACCCTCTG 2132674 33 100.0 33 ................................. GGTCTTGAGCGCCTGCTGGAACGCACGCCCCAG 2132740 33 100.0 35 ................................. TCGTGCAGCGAGACGGCGTAGGCGTGCTTGCCGGC 2132808 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ==================================== ================== 28 33 100.0 34 ATCGCTCCCCTCGCGGGGGGCGCGGATTGAAAC # Left flank : TGCTGGTGACCTACGACGTAGCAACGGCCACGCCCGAAGGACAGAAGCGGCTCCGCCACGTCGCGAAGGCCTGCCTCGACTTCGGCCAACGCGTGCAGAACTCCGTCTTCGAGATGAAGGTCGATCCCGCCCAGTGGGAGGAATGCAAAGACCGCCTCCTGCGGATCGTCCAGCTTGAGCAGGACAGCCTACGATTCTATTATCTAGGCGCCAAGTGGCAGCGGCGCGTCGAGCACCACGGCGCCAAAGCGAGCTACGACGTTGAGGGACCCCTCATTGTGTAGTTGCGACGCTATTGCGACATTGCAGCCAACAGCGATGGAACGCGGACCCGTAGTGGACGCAGCCCGCCCGGAAGGTTCGCGATGGCCGCAACTTGTTACCTGAGCACGCCTTCGGATATGCACAAGTGCACGGCATGCCGGTTCAGTCGACTGAACACGGTGGTCCGCGGAAATCAAGTTTTAACGTCCGTGGCTGCATATCGTTAGTGAGACGGC # Right flank : CTACGACGAAGGACGCATCGCGGCCGTGATCGACATCGCTTGAGGTGGTGCGGAATTGACGGACAGGTGACGTCCTTAGAATGGGCCCAACCTCAGGAGTCGCTGTGTGCCACGGAAGAATGCGAGCGGTATTCGAAAAGTGCGGCGCAATACTTCCGACAGAACCTGCGTAGTACTAAGCTGCACGTCTGAGGACTACCTCTGAACGTGTCAACGGTTCGGTTCCGGATGGATGATATTGCTATGATGAGGGCGTCCGGTGAAGCGAAGTTTGGCTCTGCGGGGACGCAACCGAACGAGGAATAGCCGGATCGATGGTGCGCCGAAGCGCGTGGGCCCTCGGGCGGCCGGTCTGCTCGGGGGCCGCTTGATTCCAATGCCCTTCGGACGCCAGAGCTGTGGAGTGCCGGGATAAAACCGGTTTGGAATAGAGAATGAGAGTTTCTTACGAAGAAGATTTCGCCAATCACTTTGGCCTCCGGCGGAGGGACAGATCGGGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCTCCCCTCGCGGGGGGCGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCCCCTCGCGGGGGCGCGGATCGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [46.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //